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-rwxr-xr-xtools/h5repack/h5repack.sh.in2
-rw-r--r--tools/h5repack/h5repack_copy.c830
-rw-r--r--tools/h5repack/h5repack_refs.c81
-rw-r--r--tools/h5repack/h5repacktst.c8
-rw-r--r--tools/lib/h5diff.c571
-rw-r--r--tools/lib/h5diff.h11
-rw-r--r--tools/lib/h5diff_attr.c28
-rw-r--r--tools/lib/h5diff_dset.c7
-rw-r--r--tools/lib/h5trav.h5
-rw-r--r--tools/testfiles/h5diff_25.txt2
-rw-r--r--tools/testfiles/h5diff_28.txt2
-rw-r--r--tools/testfiles/h5diff_70.txt597
12 files changed, 981 insertions, 1163 deletions
diff --git a/tools/h5repack/h5repack.sh.in b/tools/h5repack/h5repack.sh.in
index 21cddde..4b00bc0 100755
--- a/tools/h5repack/h5repack.sh.in
+++ b/tools/h5repack/h5repack.sh.in
@@ -160,7 +160,7 @@ fi
# copy files (these files have no filters)
TOOLTEST $FILE0
TOOLTEST $FILE1
-#TOOLTEST $FILE2
+TOOLTEST $FILE2
TOOLTEST $FILE3
TOOLTEST $FILE4
TOOLTEST $FILE5
diff --git a/tools/h5repack/h5repack_copy.c b/tools/h5repack/h5repack_copy.c
index 03faa55..e8d0f90 100644
--- a/tools/h5repack/h5repack_copy.c
+++ b/tools/h5repack/h5repack_copy.c
@@ -556,6 +556,10 @@ int do_copy_objects(hid_t fidin,
/* create property to pass copy options */
if ( (pid = H5Pcreate(H5P_OBJECT_COPY)) < 0)
goto error;
+
+ /* set options for object copy */
+ if(H5Pset_copy_object(pid, H5O_COPY_WITHOUT_ATTR_FLAG) < 0)
+ goto error;
/*-------------------------------------------------------------------------
* do the copy
@@ -573,6 +577,23 @@ int do_copy_objects(hid_t fidin,
/* close property */
if (H5Pclose(pid)<0)
goto error;
+
+
+ /*-------------------------------------------------------------------------
+ * copy attrs manually
+ *-------------------------------------------------------------------------
+ */
+ if ((dset_in=H5Dopen(fidin,travt->objs[i].name))<0)
+ goto error;
+ if ((dset_out=H5Dopen(fidout,travt->objs[i].name))<0)
+ goto error;
+ if (copy_attr(dset_in,dset_out,options)<0)
+ goto error;
+ if (H5Dclose(dset_in)<0)
+ goto error;
+ if (H5Dclose(dset_out)<0)
+ goto error;
+
} /* end do we have request for filter/chunking */
@@ -978,812 +999,3 @@ static void print_dataset_info(hid_t dcpl_id,
-
-#if 0
-
-
-
-/*-------------------------------------------------------------------------
- * Function: do_hardlinks
- *
- * Purpose: duplicate hard links
- *
- * Return: 0, ok, -1 no
- *
- * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
- *
- * Date: December, 10, 2003
- *
- *-------------------------------------------------------------------------
- */
-
-static
-int do_hardlinks(hid_t fidout,trav_table_t *travt)
-{
- unsigned int i, j;
-
- for ( i = 0; i < travt->nobjs; i++)
- {
- switch ( travt->objs[i].type )
- {
- case H5G_GROUP:
-
- if (travt->objs[i].nlinks)
- {
- for ( j=0; j<travt->objs[i].nlinks; j++)
- {
- if (H5Glink(fidout,
- H5L_TYPE_HARD,
- travt->objs[i].name,
- travt->objs[i].links[j].new_name)<0)
- return -1;
- }
- }
-
- break;
-
- case H5G_DATASET:
-
- if (travt->objs[i].nlinks)
- {
- for ( j=0; j<travt->objs[i].nlinks; j++){
- if (H5Glink(fidout,
- H5L_TYPE_HARD,
- travt->objs[i].name,
- travt->objs[i].links[j].new_name)<0)
- return -1;
- }
- }
-
- break;
-
- case H5G_TYPE:
- case H5G_LINK:
- case H5G_UDLINK:
-
- /*nothing to do */
- break;
-
- default:
-
- break;
- }
- }
-
- return 0;
-
-}
-
-
-/*-------------------------------------------------------------------------
- * Function: do_copy_refobjs
- *
- * Purpose: duplicate all referenced HDF5 objects in the file in a second traversal
- *
- * Return: 0, ok, -1 no
- *
- * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
- *
- * Date: December, 10, 2003
- *
- *-------------------------------------------------------------------------
- */
-
-static
-int do_copy_refobjs(hid_t fidin,
- hid_t fidout,
- trav_table_t *travt,
- pack_opt_t *options) /* repack options */
-{
- hid_t grp_in=-1; /* read group ID */
- hid_t grp_out=-1; /* write group ID */
- hid_t dset_in=-1; /* read dataset ID */
- hid_t dset_out=-1; /* write dataset ID */
- hid_t type_in=-1; /* named type ID */
- hid_t dcpl_id=-1; /* dataset creation property list ID */
- hid_t space_id=-1; /* space ID */
- hid_t ftype_id=-1; /* file type ID */
- hid_t wtype_id=-1; /* read/write type ID */
- size_t msize; /* size of type */
- hsize_t nelmts; /* number of elements in dataset */
- int rank; /* rank of dataset */
- hsize_t dims[H5S_MAX_RANK];/* dimensions of dataset */
- int next; /* external files */
- unsigned i;
- int j;
-
-/*-------------------------------------------------------------------------
- * browse
- *-------------------------------------------------------------------------
- */
-
- for ( i = 0; i < travt->nobjs; i++)
- {
- switch ( travt->objs[i].type )
- {
-
- case H5G_GROUP:
-
- break;
-
- /*-------------------------------------------------------------------------
- * H5G_DATASET
- *-------------------------------------------------------------------------
- */
- case H5G_DATASET:
-
- if ((dset_in=H5Dopen(fidin,travt->objs[i].name))<0)
- goto error;
- if ((space_id=H5Dget_space(dset_in))<0)
- goto error;
- if ((ftype_id=H5Dget_type (dset_in))<0)
- goto error;
- if ((dcpl_id=H5Dget_create_plist(dset_in))<0)
- goto error;
- if ( (rank=H5Sget_simple_extent_ndims(space_id))<0)
- goto error;
- if ( H5Sget_simple_extent_dims(space_id,dims,NULL)<0)
- goto error;
- nelmts=1;
- for (j=0; j<rank; j++)
- nelmts*=dims[j];
-
- if (options->use_native==1)
- wtype_id = h5tools_get_native_type(ftype_id);
- else
- wtype_id = H5Tcopy(ftype_id);
-
- if ((msize=H5Tget_size(wtype_id))==0)
- goto error;
-
-/*-------------------------------------------------------------------------
- * check for external files
- *-------------------------------------------------------------------------
- */
- if ((next=H5Pget_external_count (dcpl_id))<0)
- goto error;
-/*-------------------------------------------------------------------------
- * check if the dataset creation property list has filters that
- * are not registered in the current configuration
- * 1) the external filters GZIP and SZIP might not be available
- * 2) the internal filters might be turned off
- *-------------------------------------------------------------------------
- */
- if (next==0 && h5tools_canreadf((NULL),dcpl_id)==1)
- {
-/*-------------------------------------------------------------------------
- * test for a valid output dataset
- *-------------------------------------------------------------------------
- */
- dset_out = FAIL;
-
-/*-------------------------------------------------------------------------
- * object references are a special case
- * we cannot just copy the buffers, but instead we recreate the reference
- *-------------------------------------------------------------------------
- */
- if (H5Tequal(wtype_id, H5T_STD_REF_OBJ))
- {
- H5G_obj_t obj_type;
- hid_t refobj_id;
- hobj_ref_t *refbuf=NULL; /* buffer for object references */
- hobj_ref_t *buf=NULL;
- const char* refname;
- unsigned u;
-
- /*-------------------------------------------------------------------------
- * read to memory
- *-------------------------------------------------------------------------
- */
-
- if (nelmts)
- {
- buf=(void *) HDmalloc((unsigned)(nelmts*msize));
- if ( buf==NULL){
- error_msg(progname, "cannot read into memory\n" );
- goto error;
- }
- if (H5Dread(dset_in,wtype_id,H5S_ALL,H5S_ALL,H5P_DEFAULT,buf)<0)
- goto error;
-
- if ((obj_type = H5Rget_obj_type(dset_in,H5R_OBJECT,buf))<0)
- goto error;
- refbuf=HDmalloc((unsigned)nelmts*msize);
- if ( refbuf==NULL){
- error_msg(progname, "cannot allocate memory\n" );
- goto error;
- }
- for ( u=0; u<nelmts; u++)
- {
- H5E_BEGIN_TRY {
- if ((refobj_id = H5Rdereference(dset_in,H5R_OBJECT,&buf[u]))<0)
- continue;
- } H5E_END_TRY;
- /* get the name. a valid name could only occur in the
- second traversal of the file */
- if ((refname=MapIdToName(refobj_id,travt))!=NULL)
- {
- /* create the reference, -1 parameter for objects */
- if (H5Rcreate(&refbuf[u],fidout,refname,H5R_OBJECT,-1)<0)
- goto error;
- if (options->verbose)
- printf("object <%s> object reference created to <%s>\n",
- travt->objs[i].name,
- refname);
- }/*refname*/
- close_obj(obj_type,refobj_id);
- }/* u */
- }/*nelmts*/
-
- /*-------------------------------------------------------------------------
- * create/write dataset/close
- *-------------------------------------------------------------------------
- */
- if ((dset_out=H5Dcreate(fidout,travt->objs[i].name,wtype_id,space_id,dcpl_id))<0)
- goto error;
- if (nelmts) {
- if (H5Dwrite(dset_out,wtype_id,H5S_ALL,H5S_ALL,H5P_DEFAULT,refbuf)<0)
- goto error;
- }
-
- if (buf)
- free(buf);
- if (refbuf)
- free(refbuf);
-
- }/*H5T_STD_REF_OBJ*/
-
-/*-------------------------------------------------------------------------
- * dataset region references
- *-------------------------------------------------------------------------
- */
- else if (H5Tequal(wtype_id, H5T_STD_REF_DSETREG))
- {
- H5G_obj_t obj_type;
- hid_t refobj_id;
- hdset_reg_ref_t *refbuf=NULL; /* input buffer for region references */
- hdset_reg_ref_t *buf=NULL; /* output buffer */
- const char* refname;
- unsigned u;
-
- /*-------------------------------------------------------------------------
- * read input to memory
- *-------------------------------------------------------------------------
- */
- if (nelmts)
- {
- buf=(void *) HDmalloc((unsigned)(nelmts*msize));
- if ( buf==NULL){
- error_msg(progname, "cannot read into memory\n" );
- goto error;
- }
- if (H5Dread(dset_in,wtype_id,H5S_ALL,H5S_ALL,H5P_DEFAULT,buf)<0)
- goto error;
- if ((obj_type = H5Rget_obj_type(dset_in,H5R_DATASET_REGION,buf))<0)
- goto error;
-
- /*-------------------------------------------------------------------------
- * create output
- *-------------------------------------------------------------------------
- */
-
- refbuf=HDcalloc(sizeof(hdset_reg_ref_t),(size_t)nelmts); /*init to zero */
- if ( refbuf==NULL){
- error_msg(progname, "cannot allocate memory\n" );
- goto error;
- }
- for ( u=0; u<nelmts; u++)
- {
- H5E_BEGIN_TRY {
- if ((refobj_id = H5Rdereference(dset_in,H5R_DATASET_REGION,&buf[u]))<0)
- continue;
- } H5E_END_TRY;
-
- /* get the name. a valid name could only occur in the
- second traversal of the file */
- if ((refname=MapIdToName(refobj_id,travt))!=NULL)
- {
- hid_t region_id; /* region id of the referenced dataset */
- if ((region_id = H5Rget_region(dset_in,H5R_DATASET_REGION,&buf[u]))<0)
- goto error;
- /* create the reference, we need the space_id */
- if (H5Rcreate(&refbuf[u],fidout,refname,H5R_DATASET_REGION,region_id)<0)
- goto error;
- if (H5Sclose(region_id)<0)
- goto error;
- if (options->verbose)
- printf("object <%s> region reference created to <%s>\n",
- travt->objs[i].name,
- refname);
- }/*refname*/
- close_obj(obj_type,refobj_id);
- }/* u */
- }/*nelmts*/
-
- /*-------------------------------------------------------------------------
- * create/write dataset/close
- *-------------------------------------------------------------------------
- */
- if ((dset_out=H5Dcreate(fidout,travt->objs[i].name,wtype_id,space_id,dcpl_id))<0)
- goto error;
- if (nelmts) {
- if (H5Dwrite(dset_out,wtype_id,H5S_ALL,H5S_ALL,H5P_DEFAULT,refbuf)<0)
- goto error;
- }
-
- if (buf)
- free(buf);
- if (refbuf)
- free(refbuf);
- } /* H5T_STD_REF_DSETREG */
-
-
-/*-------------------------------------------------------------------------
- * not references, open previously created object in 1st traversal
- *-------------------------------------------------------------------------
- */
- else
- {
- if ((dset_out=H5Dopen(fidout,travt->objs[i].name))<0)
- goto error;
- }
-
- assert(dset_out!=FAIL);
-
-/*-------------------------------------------------------------------------
- * copy referenced objects in attributes
- *-------------------------------------------------------------------------
- */
- if (copy_refs_attr(dset_in,dset_out,options,travt,fidout)<0)
- goto error;
-
-
-
- if (H5Dclose(dset_out)<0)
- goto error;
-
- }/*can_read*/
-
- /*-------------------------------------------------------------------------
- * close
- *-------------------------------------------------------------------------
- */
-
- if (H5Tclose(ftype_id)<0)
- goto error;
- if (H5Tclose(wtype_id)<0)
- goto error;
- if (H5Pclose(dcpl_id)<0)
- goto error;
- if (H5Sclose(space_id)<0)
- goto error;
- if (H5Dclose(dset_in)<0)
- goto error;
-
-
- break;
-
-
- case H5G_TYPE:
- case H5G_LINK:
- case H5G_UDLINK:
-
- /*nothing to do */
- break;
-
- default:
-
- break;
- }
- }
-
-
-/*-------------------------------------------------------------------------
- * the root is a special case, we get an ID for the root group
- * and copy its attributes using that ID
- * it must be done last, because the attributes might contain references to
- * objects in the object list
- *-------------------------------------------------------------------------
- */
-
- if ((grp_out = H5Gopen(fidout,"/"))<0)
- goto error;
-
- if ((grp_in = H5Gopen(fidin,"/"))<0)
- goto error;
-
- if (copy_refs_attr(grp_in,grp_out,options,travt,fidout)<0)
- goto error;
-
- if (H5Gclose(grp_out)<0)
- goto error;
- if (H5Gclose(grp_in)<0)
- goto error;
-
-
- return 0;
-
-error:
- H5E_BEGIN_TRY {
- H5Gclose(grp_in);
- H5Gclose(grp_out);
- H5Pclose(dcpl_id);
- H5Sclose(space_id);
- H5Dclose(dset_in);
- H5Dclose(dset_out);
- H5Tclose(ftype_id);
- H5Tclose(wtype_id);
- H5Tclose(type_in);
- } H5E_END_TRY;
- return -1;
-
-}
-
-
-
-/*-------------------------------------------------------------------------
- * Function: copy_refs_attr
- *
- * Purpose: duplicate all referenced HDF5 objects located in attributes
- * relative to LOC_IN, which is obtained either from
- * loc_id = H5Gopen( fid, name);
- * loc_id = H5Dopen( fid, name);
- * loc_id = H5Topen( fid, name);
- *
- * Return: 0, ok, -1 no
- *
- * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
- *
- * Date: October, 28, 2003
- *
- *-------------------------------------------------------------------------
- */
-
-static int copy_refs_attr(hid_t loc_in,
- hid_t loc_out,
- pack_opt_t *options,
- trav_table_t *travt,
- hid_t fidout /* for saving references */
- )
-{
- hid_t attr_id=-1; /* attr ID */
- hid_t attr_out=-1; /* attr ID */
- hid_t space_id=-1; /* space ID */
- hid_t ftype_id=-1; /* file type ID */
- hid_t wtype_id=-1; /* read/write type ID */
- size_t msize; /* size of type */
- hsize_t nelmts; /* number of elements in dataset */
- int rank; /* rank of dataset */
- hsize_t dims[H5S_MAX_RANK];/* dimensions of dataset */
- char name[255];
- int n, j;
- unsigned u;
-
- if ((n = H5Aget_num_attrs(loc_in))<0)
- goto error;
-
- for ( u = 0; u < (unsigned)n; u++)
- {
-
-/*-------------------------------------------------------------------------
- * open
- *-------------------------------------------------------------------------
- */
- /* open attribute */
- if ((attr_id = H5Aopen_idx(loc_in, u))<0)
- goto error;
-
- /* get name */
- if (H5Aget_name( attr_id, 255, name )<0)
- goto error;
-
- /* get the file datatype */
- if ((ftype_id = H5Aget_type( attr_id )) < 0 )
- goto error;
-
- /* get the dataspace handle */
- if ((space_id = H5Aget_space( attr_id )) < 0 )
- goto error;
-
- /* get dimensions */
- if ( (rank = H5Sget_simple_extent_dims(space_id, dims, NULL)) < 0 )
- goto error;
-
-
- /*-------------------------------------------------------------------------
- * elements
- *-------------------------------------------------------------------------
- */
- nelmts=1;
- for (j=0; j<rank; j++)
- nelmts*=dims[j];
-
- if (options->use_native==1)
- wtype_id = h5tools_get_native_type(ftype_id);
- else
- wtype_id = H5Tcopy(ftype_id);
-
- if ((msize=H5Tget_size(wtype_id))==0)
- goto error;
-
-/*-------------------------------------------------------------------------
- * object references are a special case
- * we cannot just copy the buffers, but instead we recreate the reference
- *-------------------------------------------------------------------------
- */
- if (H5Tequal(wtype_id, H5T_STD_REF_OBJ))
- {
- H5G_obj_t obj_type;
- hid_t refobj_id;
- hobj_ref_t *refbuf=NULL;
- unsigned k;
- const char* refname;
- hobj_ref_t *buf=NULL;
-
- /*-------------------------------------------------------------------------
- * read input to memory
- *-------------------------------------------------------------------------
- */
-
- if (nelmts)
- {
- buf=(void *) HDmalloc((unsigned)(nelmts*msize));
- if ( buf==NULL){
- error_msg(progname, "cannot read into memory\n" );
- goto error;
- }
- if (H5Aread(attr_id,wtype_id,buf)<0)
- goto error;
-
- if ((obj_type = H5Rget_obj_type(attr_id,H5R_OBJECT,buf))<0)
- goto error;
- refbuf=HDmalloc((unsigned)nelmts*msize);
- if ( refbuf==NULL){
- error_msg(progname, "cannot allocate memory\n" );
- goto error;
- }
- for ( k=0; k<nelmts; k++)
- {
- H5E_BEGIN_TRY {
- if ((refobj_id = H5Rdereference(attr_id,H5R_OBJECT,&buf[k]))<0)
- goto error;
- } H5E_END_TRY;
- /* get the name. a valid name could only occur in the
- second traversal of the file */
- if ((refname=MapIdToName(refobj_id,travt))!=NULL)
- {
- /* create the reference */
- if (H5Rcreate(&refbuf[k],fidout,refname,H5R_OBJECT,-1)<0)
- goto error;
- if (options->verbose)
- printf("object <%s> reference created to <%s>\n",name,refname);
- }
- close_obj(obj_type,refobj_id);
- }/* k */
- }/*nelmts*/
-
- /*-------------------------------------------------------------------------
- * copy
- *-------------------------------------------------------------------------
- */
-
- if ((attr_out=H5Acreate(loc_out,name,ftype_id,space_id,H5P_DEFAULT))<0)
- goto error;
- if (nelmts) {
- if(H5Awrite(attr_out,wtype_id,refbuf)<0)
- goto error;
- }
-
- if (H5Aclose(attr_out)<0)
- goto error;
-
- if (refbuf)
- free(refbuf);
- if (buf)
- free(buf);
-
- }/*H5T_STD_REF_OBJ*/
-
-/*-------------------------------------------------------------------------
- * dataset region references
- *-------------------------------------------------------------------------
- */
- else if (H5Tequal(wtype_id, H5T_STD_REF_DSETREG))
- {
- H5G_obj_t obj_type;
- hid_t refobj_id;
- hdset_reg_ref_t *refbuf=NULL; /* input buffer for region references */
- hdset_reg_ref_t *buf=NULL; /* output buffer */
- const char* refname;
- unsigned k;
-
- /*-------------------------------------------------------------------------
- * read input to memory
- *-------------------------------------------------------------------------
- */
-
- if (nelmts)
- {
- buf=(void *) HDmalloc((unsigned)(nelmts*msize));
- if ( buf==NULL){
- error_msg(progname, "cannot read into memory\n" );
- goto error;
- }
- if (H5Aread(attr_id,wtype_id,buf)<0)
- goto error;
- if ((obj_type = H5Rget_obj_type(attr_id,H5R_DATASET_REGION,buf))<0)
- goto error;
-
- /*-------------------------------------------------------------------------
- * create output
- *-------------------------------------------------------------------------
- */
-
- refbuf=HDcalloc(sizeof(hdset_reg_ref_t),(size_t)nelmts); /*init to zero */
- if ( refbuf==NULL){
- error_msg(progname, "cannot allocate memory\n" );
- goto error;
- }
- for ( k=0; k<nelmts; k++)
- {
- H5E_BEGIN_TRY {
- if ((refobj_id = H5Rdereference(attr_id,H5R_DATASET_REGION,&buf[k]))<0)
- continue;
- } H5E_END_TRY;
- /* get the name. a valid name could only occur in the
- second traversal of the file */
- if ((refname=MapIdToName(refobj_id,travt))!=NULL)
- {
- hid_t region_id; /* region id of the referenced dataset */
- if ((region_id = H5Rget_region(attr_id,H5R_DATASET_REGION,&buf[k]))<0)
- goto error;
- /* create the reference, we need the space_id */
- if (H5Rcreate(&refbuf[k],fidout,refname,H5R_DATASET_REGION,region_id)<0)
- goto error;
- if (H5Sclose(region_id)<0)
- goto error;
- if (options->verbose)
- printf("object <%s> region reference created to <%s>\n",name,refname);
- }
- close_obj(obj_type,refobj_id);
- }/* k */
- }/*nelmts */
-
- /*-------------------------------------------------------------------------
- * copy
- *-------------------------------------------------------------------------
- */
-
- if ((attr_out=H5Acreate(loc_out,name,ftype_id,space_id,H5P_DEFAULT))<0)
- goto error;
- if (nelmts) {
- if(H5Awrite(attr_out,wtype_id,refbuf)<0)
- goto error;
- }
- if (H5Aclose(attr_out)<0)
- goto error;
- if (refbuf)
- free(refbuf);
- if (buf)
- free(buf);
- } /* H5T_STD_REF_DSETREG */
-
-/*-------------------------------------------------------------------------
- * close
- *-------------------------------------------------------------------------
- */
-
- if (H5Tclose(ftype_id)<0) goto error;
- if (H5Tclose(wtype_id)<0) goto error;
- if (H5Sclose(space_id)<0) goto error;
- if (H5Aclose(attr_id)<0) goto error;
- } /* u */
-
- return 0;
-
-error:
- H5E_BEGIN_TRY {
- H5Tclose(ftype_id);
- H5Tclose(wtype_id);
- H5Sclose(space_id);
- H5Aclose(attr_id);
- H5Aclose(attr_out);
- } H5E_END_TRY;
- return -1;
-}
-
-/*-------------------------------------------------------------------------
- * Function: close_obj
- *
- * Purpose: Auxiliary function to close an object
- *
- *-------------------------------------------------------------------------
- */
-
-static void close_obj(H5G_obj_t obj_type, hid_t obj_id)
-{
- H5E_BEGIN_TRY
- {
- switch (obj_type)
- {
- case H5G_GROUP:
- H5Gclose(obj_id);
- break;
- case H5G_DATASET:
- H5Dclose(obj_id);
- break;
- case H5G_TYPE:
- H5Tclose(obj_id);
- break;
- default:
- break;
- }
- } H5E_END_TRY;
-}
-
-/*-------------------------------------------------------------------------
- * Function: MapIdToName
- *
- * Purpose: map an object ID to a name
- *
- *-------------------------------------------------------------------------
- */
-
-static const char* MapIdToName(hid_t refobj_id,
- trav_table_t *travt)
-{
- hid_t id;
- hid_t fid;
- H5G_stat_t refstat; /* Stat for the refobj id */
- H5G_stat_t objstat; /* Stat for objects in the file */
- unsigned int i;
-
- /* obtain information to identify the referenced object uniquely */
- if(H5Gget_objinfo(refobj_id, ".", 0, &refstat) <0)
- return NULL;
-
- /* obtains the file ID given an object ID. This ID must be closed */
- if ((fid = H5Iget_file_id(refobj_id))<0)
- {
- return NULL;
- }
-
- /* linear search */
- for ( i=0; i<travt->nobjs; i++)
- {
- switch ( travt->objs[i].type )
- {
- default:
- break;
-
- /*-------------------------------------------------------------------------
- * H5G_DATASET
- *-------------------------------------------------------------------------
- */
-
- case H5G_DATASET:
-
- if ((id = H5Dopen(fid,travt->objs[i].name))<0)
- return NULL;
- if(H5Gget_objinfo(id, ".", 0, &objstat) <0)
- return NULL;
- if (H5Dclose(id)<0)
- return NULL;
- if (!HDmemcmp(&refstat.fileno, &objstat.fileno, sizeof(refstat.fileno)) && !HDmemcmp(&refstat.objno, &objstat.objno, sizeof(refstat.objno)))
- {
- H5Fclose(fid);
- return travt->objs[i].name;
- }
- break;
- } /* switch */
- } /* i */
-
- if (H5Fclose(fid)<0)
- return NULL;
-
- return NULL;
-}
-
-
-#endif
-
diff --git a/tools/h5repack/h5repack_refs.c b/tools/h5repack/h5repack_refs.c
index 0fc9dc3..e29769a 100644
--- a/tools/h5repack/h5repack_refs.c
+++ b/tools/h5repack/h5repack_refs.c
@@ -1,3 +1,4 @@
+
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
@@ -20,18 +21,14 @@
#include "H5private.h"
#include "h5repack.h"
-static const char* MapIdToName(hid_t refobj_id,
- trav_table_t *travt);
-
-static void close_obj(H5G_obj_t obj_type, hid_t obj_id);
+/*-------------------------------------------------------------------------
+ * local functions
+ *-------------------------------------------------------------------------
+ */
-
-static int copy_refs_attr(hid_t loc_in,
- hid_t loc_out,
- pack_opt_t *options,
- trav_table_t *travt,
- hid_t fidout /* for saving references */
- );
+static const char* MapIdToName(hid_t refobj_id,trav_table_t *travt);
+static void close_obj(H5G_obj_t1 obj_type, hid_t obj_id);
+static int copy_refs_attr(hid_t loc_in,hid_t loc_out,pack_opt_t *options,trav_table_t *travt,hid_t fidout);
/*-------------------------------------------------------------------------
* Function: do_copy_refobjs
@@ -62,12 +59,13 @@ int do_copy_refobjs(hid_t fidin,
hid_t space_id=(-1); /* space ID */
hid_t ftype_id=(-1); /* file data type ID */
hid_t mtype_id=(-1); /* memory data type ID */
- size_t msize; /* memory size of memory type */
- hsize_t nelmts; /* number of elements in dataset */
- int rank; /* rank of dataset */
- hsize_t dims[H5S_MAX_RANK];/* dimensions of dataset */
- int next; /* external files */
- unsigned i, j;
+ size_t msize; /* memory size of memory type */
+ hsize_t nelmts; /* number of elements in dataset */
+ int rank; /* rank of dataset */
+ hsize_t dims[H5S_MAX_RANK]; /* dimensions of dataset */
+ int next; /* external files */
+ unsigned int i, j;
+ int k;
/*-------------------------------------------------------------------------
* browse
@@ -143,8 +141,8 @@ int do_copy_refobjs(hid_t fidin,
if ( H5Sget_simple_extent_dims(space_id,dims,NULL)<0)
goto error;
nelmts=1;
- for (j=0; j<rank; j++)
- nelmts*=dims[j];
+ for (k=0; k<rank; k++)
+ nelmts*=dims[k];
if ((mtype_id=h5tools_get_native_type(ftype_id))<0)
goto error;
@@ -180,7 +178,7 @@ int do_copy_refobjs(hid_t fidin,
*/
if (H5Tequal(mtype_id, H5T_STD_REF_OBJ))
{
- H5G_obj_t obj_type;
+ H5G_obj_t1 obj_type;
hid_t refobj_id;
hobj_ref_t *refbuf=NULL; /* buffer for object references */
hobj_ref_t *buf=NULL;
@@ -255,7 +253,7 @@ int do_copy_refobjs(hid_t fidin,
*/
else if (H5Tequal(mtype_id, H5T_STD_REF_DSETREG))
{
- H5G_obj_t obj_type;
+ H5G_obj_t1 obj_type;
hid_t refobj_id;
hdset_reg_ref_t *refbuf=NULL; /* input buffer for region references */
hdset_reg_ref_t *buf=NULL; /* output buffer */
@@ -350,8 +348,10 @@ int do_copy_refobjs(hid_t fidin,
* copy referenced objects in attributes
*-------------------------------------------------------------------------
*/
+#if 1
if (copy_refs_attr(dset_in,dset_out,options,travt,fidout)<0)
goto error;
+#endif
/*-------------------------------------------------------------------------
@@ -489,14 +489,14 @@ static int copy_refs_attr(hid_t loc_in,
hid_t fidout /* for saving references */
)
{
- hid_t attr_id=-1; /* attr ID */
- hid_t attr_out=-1; /* attr ID */
- hid_t space_id=-1; /* space ID */
- hid_t ftype_id=-1; /* file data type ID */
- hid_t mtype_id=-1; /* memory data type ID */
- size_t msize; /* memory size of type */
- hsize_t nelmts; /* number of elements in dataset */
- int rank; /* rank of dataset */
+ hid_t attr_id=-1; /* attr ID */
+ hid_t attr_out=-1; /* attr ID */
+ hid_t space_id=-1; /* space ID */
+ hid_t ftype_id=-1; /* file data type ID */
+ hid_t mtype_id=-1; /* memory data type ID */
+ size_t msize; /* memory size of type */
+ hsize_t nelmts; /* number of elements in dataset */
+ int rank; /* rank of dataset */
hsize_t dims[H5S_MAX_RANK];/* dimensions of dataset */
char name[255];
int n, j;
@@ -554,7 +554,7 @@ static int copy_refs_attr(hid_t loc_in,
*/
if (H5Tequal(mtype_id, H5T_STD_REF_OBJ))
{
- H5G_obj_t obj_type;
+ H5G_obj_t1 obj_type;
hid_t refobj_id;
hobj_ref_t *refbuf=NULL;
unsigned k;
@@ -631,7 +631,7 @@ static int copy_refs_attr(hid_t loc_in,
*/
else if (H5Tequal(mtype_id, H5T_STD_REF_DSETREG))
{
- H5G_obj_t obj_type;
+ H5G_obj_t1 obj_type;
hid_t refobj_id;
hdset_reg_ref_t *refbuf=NULL; /* input buffer for region references */
hdset_reg_ref_t *buf=NULL; /* output buffer */
@@ -734,14 +734,14 @@ error:
}
/*-------------------------------------------------------------------------
- * Function: close_obj
+ * Function: close_obj
*
- * Purpose: Auxiliary function to close an object
+ * Purpose: Auxiliary function to close an object
*
*-------------------------------------------------------------------------
*/
-static void close_obj(H5G_obj_t obj_type, hid_t obj_id)
+static void close_obj(H5G_obj_t1 obj_type, hid_t obj_id)
{
H5E_BEGIN_TRY
{
@@ -761,6 +761,7 @@ static void close_obj(H5G_obj_t obj_type, hid_t obj_id)
}
} H5E_END_TRY;
}
+
/*-------------------------------------------------------------------------
* Function: MapIdToName
*
@@ -772,11 +773,11 @@ static void close_obj(H5G_obj_t obj_type, hid_t obj_id)
static const char* MapIdToName(hid_t refobj_id,
trav_table_t *travt)
{
- hid_t id;
- hid_t fid;
- H5G_stat_t refstat; /* Stat for the refobj id */
- H5G_stat_t objstat; /* Stat for objects in the file */
- int i;
+ hid_t id;
+ hid_t fid;
+ H5G_stat_t refstat; /* Stat for the refobj id */
+ H5G_stat_t objstat; /* Stat for objects in the file */
+ unsigned int i;
/* obtain information to identify the referenced object uniquely */
if(H5Gget_objinfo(refobj_id, ".", 0, &refstat) <0)
@@ -825,3 +826,5 @@ static const char* MapIdToName(hid_t refobj_id,
return NULL;
}
+
+
diff --git a/tools/h5repack/h5repacktst.c b/tools/h5repack/h5repacktst.c
index 6d58abc..098d6d8 100644
--- a/tools/h5repack/h5repacktst.c
+++ b/tools/h5repack/h5repacktst.c
@@ -160,6 +160,8 @@ int main (void)
*-------------------------------------------------------------------------
*/
+#if 0
+
/*-------------------------------------------------------------------------
* file with fill values
*-------------------------------------------------------------------------
@@ -198,11 +200,12 @@ int main (void)
GOERROR;
PASSED();
+#endif
+
/*-------------------------------------------------------------------------
* file with attributes
*-------------------------------------------------------------------------
*/
-#if 0
TESTING(" copy of datasets (attributes)");
if (h5repack_init (&pack_options, 0)<0)
GOERROR;
@@ -217,7 +220,6 @@ int main (void)
if (h5repack_end (&pack_options)<0)
GOERROR;
PASSED();
-#endif
/*-------------------------------------------------------------------------
* file with hardlinks
@@ -3541,7 +3543,7 @@ void write_attr_in(hid_t loc_id,
{
status=H5Rcreate(&buf4[0],fid,dset_name,H5R_OBJECT,-1);
status=H5Rcreate(&buf4[1],fid,dset_name,H5R_OBJECT,-1);
- make_attr(loc_id,1,dims,"reference to object",H5T_STD_REF_OBJ,buf4);
+ make_attr(loc_id,1,dims,"reference",H5T_STD_REF_OBJ,buf4);
}
diff --git a/tools/lib/h5diff.c b/tools/lib/h5diff.c
index d770769..205f45f 100644
--- a/tools/lib/h5diff.c
+++ b/tools/lib/h5diff.c
@@ -882,11 +882,10 @@ hsize_t diff_compare (hid_t file1_id,
*
* Purpose: switch between types and choose the diff function
* TYPE is either
- * H5G_GROUP Object is a group
- * H5G_DATASET Object is a dataset
- * H5G_TYPE Object is a named data type
- * H5G_LINK Object is a symbolic link
- * H5G_UDLINK Object is a user-defined link
+ * H5G_GROUP Object is a group
+ * H5G_DATASET Object is a dataset
+ * H5G_TYPE Object is a named data type
+ * H5G_LINK Object is a symbolic link
*
* Return: Number of differences found
*
@@ -899,301 +898,301 @@ hsize_t diff_compare (hid_t file1_id,
hsize_t diff (hid_t file1_id,
const char *path1,
- hid_t file2_id,
- const char *path2,
- diff_opt_t * options,
- H5G_obj_t type)
+ hid_t file2_id,
+ const char *path2,
+ diff_opt_t * options,
+ H5G_obj_t1 type)
{
- hid_t type1_id=(-1);
- hid_t type2_id=(-1);
- hid_t grp1_id=(-1);
- hid_t grp2_id=(-1);
- int ret;
- H5G_stat_t sb1;
- H5G_stat_t sb2;
- hsize_t nfound=0;
-
- switch (type)
- {
-/*-------------------------------------------------------------------------
- * H5G_DATASET
- *-------------------------------------------------------------------------
- */
- case H5G_DATASET:
-
-/*-------------------------------------------------------------------------
- * verbose, always print name
- *-------------------------------------------------------------------------
- */
- if (options->m_verbose)
- {
- if (print_objname (options, (hsize_t)1))
- do_print_objname ("dataset", path1, path2);
- nfound = diff_dataset (file1_id, file2_id, path1, path2, options);
- /* always print the number of differences found */
- print_found(nfound);
- }
- /*-------------------------------------------------------------------------
- * non verbose, check first if we have differences
- *-------------------------------------------------------------------------
- */
- else
- {
- if (options->m_quiet == 0)
- {
- /* shut up temporarily */
- options->m_quiet = 1;
- nfound = diff_dataset (file1_id, file2_id, path1, path2, options);
- /* print again */
- options->m_quiet = 0;
- if (nfound)
+ hid_t type1_id=(-1);
+ hid_t type2_id=(-1);
+ hid_t grp1_id=(-1);
+ hid_t grp2_id=(-1);
+ int ret;
+ H5G_stat_t sb1;
+ H5G_stat_t sb2;
+ hsize_t nfound = 0;
+
+ switch (type)
{
- if (print_objname (options, nfound))
- do_print_objname ("dataset", path1, path2);
- nfound = diff_dataset (file1_id, file2_id, path1, path2, options);
- /* print the number of differences found only when found
- this is valid for the default mode and report mode */
- print_found(nfound);
- } /*if nfound */
- } /*if quiet */
-
- /*-------------------------------------------------------------------------
- * quiet mode, just count differences
- *-------------------------------------------------------------------------
- */
- else
- {
- nfound = diff_dataset (file1_id, file2_id, path1, path2, options);
- }
- } /*else verbose */
-
- break;
-
- /*-------------------------------------------------------------------------
- * H5G_TYPE
- *-------------------------------------------------------------------------
- */
- case H5G_TYPE:
- if ((type1_id = H5Topen (file1_id, path1)) < 0)
- goto out;
- if ((type2_id = H5Topen (file2_id, path2)) < 0)
- goto out;
-
- if ((ret = H5Tequal (type1_id, type2_id)) < 0)
- goto out;
-
- /* if H5Tequal is > 0 then the datatypes refer to the same datatype */
- nfound = (ret > 0) ? 0 : 1;
-
- if (print_objname (options, nfound))
- do_print_objname ("datatype", path1, path2);
-
- /* always print the number of differences found in verbose mode */
- if (options->m_verbose)
- print_found(nfound);
-
- /*-------------------------------------------------------------------------
- * compare attributes
- * the if condition refers to cases when the dataset is a referenced object
- *-------------------------------------------------------------------------
- */
- if (path1)
- diff_attr (type1_id, type2_id, path1, path2, options);
-
- if (H5Tclose (type1_id) < 0)
- goto out;
- if (H5Tclose (type2_id) < 0)
- goto out;
-
- break;
-
- /*-------------------------------------------------------------------------
- * H5G_GROUP
- *-------------------------------------------------------------------------
- */
- case H5G_GROUP:
- if ((grp1_id = H5Gopen (file1_id, path1)) < 0)
- goto out;
- if ((grp2_id = H5Gopen (file2_id, path2)) < 0)
- goto out;
-
- ret = HDstrcmp (path1, path2);
-
- /* if "path1" != "path2" then the groups are "different" */
- nfound = (ret != 0) ? 1 : 0;
-
- if (print_objname (options, nfound))
- do_print_objname ("group", path1, path2);
-
- /* always print the number of differences found in verbose mode */
- if (options->m_verbose)
- print_found(nfound);
-
- /*-------------------------------------------------------------------------
- * compare attributes
- * the if condition refers to cases when the dataset is a referenced object
- *-------------------------------------------------------------------------
- */
- if (path1)
- diff_attr (grp1_id, grp2_id, path1, path2, options);
-
- if (H5Gclose (grp1_id) < 0)
- goto out;
- if (H5Gclose (grp2_id) < 0)
- goto out;
-
- break;
-
-
- /*-------------------------------------------------------------------------
- * H5G_LINK
- *-------------------------------------------------------------------------
- */
- case H5G_LINK:
- {
- char *buf1 = NULL;
- char *buf2 = NULL;
-
- if (H5Gget_objinfo (file1_id, path1, FALSE, &sb1) < 0)
- goto out;
- if (H5Gget_objinfo (file1_id, path1, FALSE, &sb2) < 0)
- goto out;
-
- buf1 = HDmalloc (sb1.linklen);
- buf2 = HDmalloc (sb2.linklen);
-
- if (H5Gget_linkval (file1_id, path1, sb1.linklen, buf1) < 0)
- goto out;
- if (H5Gget_linkval (file2_id, path2, sb1.linklen, buf2) < 0)
- goto out;
-
- ret = HDstrcmp (buf1, buf2);
-
- /* if "buf1" != "buf2" then the links are "different" */
- nfound = (ret != 0) ? 1 : 0;
-
- if (print_objname (options, nfound))
- do_print_objname ("soft link", path1, path2);
-
- /* always print the number of differences found in verbose mode */
- if (options->m_verbose)
- print_found(nfound);
-
- HDfree (buf1);
- HDfree (buf2);
- }
- break;
-
- /*-------------------------------------------------------------------------
- * H5G_UDLINK
- *-------------------------------------------------------------------------
- */
- case H5G_UDLINK:
- {
- char *buf1 = NULL;
- char *buf2 = NULL;
- H5L_info_t li1;
- H5L_info_t li2;
-
- if(H5Lget_info(file1_id, path1, &li1, H5P_DEFAULT) < 0)
- goto out;
- if(H5Lget_info(file1_id, path1, &li2, H5P_DEFAULT) < 0)
- goto out;
-
- /* Only external links will have a query function registered */
- if(li1.type == H5L_TYPE_EXTERNAL && li2.type == H5L_TYPE_EXTERNAL)
- {
- buf1 = HDmalloc (li1.u.val_size);
- buf2 = HDmalloc (li2.u.val_size);
-
- if(H5Lget_val(file1_id, path1, buf1, li1.u.val_size, H5P_DEFAULT) < 0)
- {
- HDfree (buf1); HDfree (buf2);
- goto out;
- }
- if(H5Lget_val(file2_id, path2, buf2, li2.u.val_size, H5P_DEFAULT) < 0)
- {
- HDfree (buf1); HDfree (buf2);
- goto out;
- }
-
- /* If the buffers are the same size, compare them */
- if(li1.u.val_size == li2.u.val_size)
- {
- if(H5Lget_val(file1_id, path1, buf1, li1.u.val_size, H5P_DEFAULT) < 0)
+
+ /*-------------------------------------------------------------------------
+ * H5G_DATASET
+ *-------------------------------------------------------------------------
+ */
+ case H5G_DATASET:
+
+ /*-------------------------------------------------------------------------
+ * verbose, always print name
+ *-------------------------------------------------------------------------
+ */
+ if (options->m_verbose)
{
- HDfree (buf1); HDfree (buf2);
- goto out;
+ if (print_objname(options,(hsize_t)1))
+ do_print_objname ("dataset", path1, path2);
+ nfound=diff_dataset(file1_id,file2_id,path1,path2,options);
+ print_found(nfound);
+
}
- if(H5Lget_val(file2_id, path2, buf2, li2.u.val_size, H5P_DEFAULT) < 0)
+ /*-------------------------------------------------------------------------
+ * non verbose, check first if we have differences by enabling quiet mode
+ * so that printing is off, and compare again if differences found,
+ * disabling quite mode
+ *-------------------------------------------------------------------------
+ */
+ else
{
- HDfree (buf1); HDfree (buf2);
- goto out;
+ if (options->m_quiet==0)
+ {
+ /* shut up temporarily */
+ options->m_quiet=1;
+ nfound=diff_dataset(file1_id,file2_id,path1,path2,options);
+ /* print again */
+ options->m_quiet=0;
+ if (nfound)
+ {
+ if (print_objname(options,nfound))
+ do_print_objname ("dataset", path1, path2);
+ nfound=diff_dataset(file1_id,file2_id,path1,path2,options);
+ print_found(nfound);
+ }
+ }
+ /* in quiet mode, just count differences */
+ else
+ {
+ nfound=diff_dataset(file1_id,file2_id,path1,path2,options);
+ }
}
- ret = HDmemcmp (buf1, buf2, li1.u.val_size);
- }
- else
- ret = 1;
-
- /* if "buf1" != "buf2" then the links are "different" */
- nfound = (ret != 0) ? 1 : 0;
-
- if (print_objname (options, nfound))
- do_print_objname ("external link", path1, path2);
- }
- else
- {
- /* If one or both of these links isn't an external link, we can only
- * compare information from H5Lget_info since we don't have a query
- * function registered for them. */
-
- /* If the link classes or the buffer length are not the
- * same, the links are "different"
- */
- if((li1.type != li2.type) || (li1.u.val_size != li2.u.val_size))
- nfound = 1;
- else
- nfound = 0;
-
- if (print_objname (options, nfound))
- do_print_objname ("user defined link", path1, path2);
- }
-
- /* always print the number of differences found in verbose mode */
- if (options->m_verbose)
- print_found(nfound);
-
- HDfree (buf1);
- HDfree (buf2);
- }
- break;
-
- default:
- nfound = 0;
- if (options->m_verbose)
- {
- parallel_print("Comparison not supported: <%s> and <%s> are of type %s\n",
- path1, path2, get_type (type));
- options->not_cmp=1;
- }
-
- break;
- } /* switch */
-
-
+
+ break;
+
+ /*-------------------------------------------------------------------------
+ * H5G_TYPE
+ *-------------------------------------------------------------------------
+ */
+ case H5G_TYPE:
+
+ if ((type1_id = H5Topen(file1_id, path1))<0)
+ goto out;
+ if ((type2_id = H5Topen(file2_id, path2))<0)
+ goto out;
+
+ if ((ret = H5Tequal(type1_id,type2_id))<0)
+ goto out;
+
+ /* if H5Tequal is > 0 then the datatypes refer to the same datatype */
+ nfound = (ret>0) ? 0 : 1;
+
+ if (print_objname(options,nfound))
+ do_print_objname ("datatype", path1, path2);
+
+ /* always print the number of differences found in verbose mode */
+ if (options->m_verbose)
+ print_found(nfound);
+
+ /*-------------------------------------------------------------------------
+ * compare attributes
+ * the if condition refers to cases when the dataset is a referenced object
+ *-------------------------------------------------------------------------
+ */
+ if (path1)
+ nfound += diff_attr(type1_id,type2_id,path1,path2,options);
+
+ if ( H5Tclose(type1_id)<0)
+ goto out;
+ if ( H5Tclose(type2_id)<0)
+ goto out;
+
+ break;
+
+ /*-------------------------------------------------------------------------
+ * H5G_GROUP
+ *-------------------------------------------------------------------------
+ */
+ case H5G_GROUP:
+
+ ret = HDstrcmp(path1,path2);
+
+ /* if "path1" != "path2" then the groups are "different" */
+ nfound = (ret!=0) ? 1 : 0;
+
+ if (print_objname(options,nfound))
+ do_print_objname ("group", path1, path2);
+
+ /* always print the number of differences found in verbose mode */
+ if (options->m_verbose)
+ print_found(nfound);
+
+ if ((grp1_id = H5Gopen(file1_id, path1))<0)
+ goto out;
+ if ((grp2_id = H5Gopen(file2_id, path2))<0)
+ goto out;
+ /*-------------------------------------------------------------------------
+ * compare attributes
+ * the if condition refers to cases when the dataset is a referenced object
+ *-------------------------------------------------------------------------
+ */
+ if (path1)
+ nfound += diff_attr(grp1_id,grp2_id,path1,path2,options);
+
+ if ( H5Gclose(grp1_id)<0)
+ goto out;
+ if ( H5Gclose(grp2_id)<0)
+ goto out;
+
+ break;
+
+
+ /*-------------------------------------------------------------------------
+ * H5G_LINK
+ *-------------------------------------------------------------------------
+ */
+ case H5G_LINK:
+ {
+ char *buf1 = NULL;
+ char *buf2 = NULL;
+
+ if (H5Gget_objinfo (file1_id, path1, FALSE, &sb1) < 0)
+ goto out;
+ if (H5Gget_objinfo (file1_id, path1, FALSE, &sb2) < 0)
+ goto out;
+
+ buf1 = HDmalloc (sb1.linklen);
+ buf2 = HDmalloc (sb2.linklen);
+
+ if (H5Gget_linkval (file1_id, path1, sb1.linklen, buf1) < 0)
+ goto out;
+ if (H5Gget_linkval (file2_id, path2, sb1.linklen, buf2) < 0)
+ goto out;
+
+ ret = HDstrcmp (buf1, buf2);
+
+ /* if "buf1" != "buf2" then the links are "different" */
+ nfound = (ret != 0) ? 1 : 0;
+
+ if (print_objname (options, nfound))
+ do_print_objname ("link", path1, path2);
+
+ /* always print the number of differences found in verbose mode */
+ if (options->m_verbose)
+ print_found(nfound);
+
+ HDfree (buf1);
+ HDfree (buf2);
+ }
+ break;
+
+ /*-------------------------------------------------------------------------
+ * H5G_UDLINK
+ *-------------------------------------------------------------------------
+ */
+ case H5G_UDLINK:
+ {
+ char *buf1 = NULL;
+ char *buf2 = NULL;
+ H5L_info_t li1;
+ H5L_info_t li2;
+
+ if(H5Lget_info(file1_id, path1, &li1, H5P_DEFAULT) < 0)
+ goto out;
+ if(H5Lget_info(file1_id, path1, &li2, H5P_DEFAULT) < 0)
+ goto out;
+
+ /* Only external links will have a query function registered */
+ if(li1.type == H5L_TYPE_EXTERNAL && li2.type == H5L_TYPE_EXTERNAL)
+ {
+ buf1 = HDmalloc (li1.u.val_size);
+ buf2 = HDmalloc (li2.u.val_size);
+
+ if(H5Lget_val(file1_id, path1, buf1, li1.u.val_size, H5P_DEFAULT) < 0)
+ {
+ HDfree (buf1); HDfree (buf2);
+ goto out;
+ }
+ if(H5Lget_val(file2_id, path2, buf2, li2.u.val_size, H5P_DEFAULT) < 0)
+ {
+ HDfree (buf1); HDfree (buf2);
+ goto out;
+ }
+
+ /* If the buffers are the same size, compare them */
+ if(li1.u.val_size == li2.u.val_size)
+ {
+ if(H5Lget_val(file1_id, path1, buf1, li1.u.val_size, H5P_DEFAULT) < 0)
+ {
+ HDfree (buf1); HDfree (buf2);
+ goto out;
+ }
+ if(H5Lget_val(file2_id, path2, buf2, li2.u.val_size, H5P_DEFAULT) < 0)
+ {
+ HDfree (buf1); HDfree (buf2);
+ goto out;
+ }
+ ret = HDmemcmp (buf1, buf2, li1.u.val_size);
+ }
+ else
+ ret = 1;
+
+ /* if "buf1" != "buf2" then the links are "different" */
+ nfound = (ret != 0) ? 1 : 0;
+
+ if (print_objname (options, nfound))
+ do_print_objname ("external link", path1, path2);
+ }
+ else
+ {
+ /* If one or both of these links isn't an external link, we can only
+ * compare information from H5Lget_info since we don't have a query
+ * function registered for them.
+ /* If the link classes or the buffer length are not the
+ * same, the links are "different"
+ */
+ if((li1.type != li2.type) || (li1.u.val_size != li2.u.val_size))
+ nfound = 1;
+ else
+ nfound = 0;
+
+ if (print_objname (options, nfound))
+ do_print_objname ("user defined link", path1, path2);
+ }
+
+ /* always print the number of differences found in verbose mode */
+ if (options->m_verbose)
+ print_found(nfound);
+
+ HDfree (buf1);
+ HDfree (buf2);
+ }
+ break;
+
+ default:
+ if (options->m_verbose)
+ {
+ printf("Comparison not supported: <%s> and <%s> are of type %s\n",
+ path1, path2, get_type(type) );
+ }
+ options->not_cmp=1;
+ break;
+ }
+
+
+ return nfound;
+
out:
+ options->err_stat=1;
+
/* close */
/* disable error reporting */
H5E_BEGIN_TRY
{
- H5Tclose (type1_id);
- H5Tclose (type2_id);
- H5Gclose (grp1_id);
- H5Tclose (grp2_id);
- /* enable error reporting */
+ H5Tclose (type1_id);
+ H5Tclose (type2_id);
+ H5Gclose (grp1_id);
+ H5Tclose (grp2_id);
+ /* enable error reporting */
}
H5E_END_TRY;
+
return nfound;
}
diff --git a/tools/lib/h5diff.h b/tools/lib/h5diff.h
index d154fc8..9125d7c 100644
--- a/tools/lib/h5diff.h
+++ b/tools/lib/h5diff.h
@@ -138,12 +138,11 @@ int diff_can_type( hid_t f_type1, /* file data type */
diff_opt_t *options );
-int diff_attr(hid_t loc1_id,
- hid_t loc2_id,
- const char *path1,
- const char *path2,
- diff_opt_t *options
- );
+hsize_t diff_attr(hid_t loc1_id,
+ hid_t loc2_id,
+ const char *path1,
+ const char *path2,
+ diff_opt_t *options);
/*-------------------------------------------------------------------------
diff --git a/tools/lib/h5diff_attr.c b/tools/lib/h5diff_attr.c
index c99a1ae..37bef3e 100644
--- a/tools/lib/h5diff_attr.c
+++ b/tools/lib/h5diff_attr.c
@@ -26,22 +26,23 @@
* loc_id = H5Dopen( fid, name);
* loc_id = H5Topen( fid, name);
*
- * Return:
- * 0 : no differences found
- * 1 : differences found
+ * Return: number of differences found
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: November, 03, 2003
*
+ * Modifications:
+ * March, 02, 2007: return the number of differences found
+ *
*-------------------------------------------------------------------------
*/
-int diff_attr(hid_t loc1_id,
- hid_t loc2_id,
- const char *path1,
- const char *path2,
- diff_opt_t *options)
+hsize_t diff_attr(hid_t loc1_id,
+ hid_t loc2_id,
+ const char *path1,
+ const char *path2,
+ diff_opt_t *options)
{
hid_t attr1_id=-1; /* attr ID */
hid_t attr2_id=-1; /* attr ID */
@@ -65,9 +66,9 @@ int diff_attr(hid_t loc1_id,
char np1[512];
char np2[512];
int n1, n2, i, j;
- hsize_t nfound;
+ hsize_t nfound=0;
+ hsize_t nfound_total=0;
int cmp=1;
- int ret=0;
if ((n1 = H5Aget_num_attrs(loc1_id))<0)
goto error;
@@ -95,7 +96,6 @@ int diff_attr(hid_t loc1_id,
{
if ((attr2_id = H5Aopen_name(loc2_id, name1))<0)
{
- ret = 1;
goto error;
}
} H5E_END_TRY;
@@ -285,9 +285,11 @@ int diff_attr(hid_t loc1_id,
HDfree(buf1);
if (buf2)
HDfree(buf2);
+
+ nfound_total += nfound;
} /* i */
- return ret;
+ return nfound_total;
error:
H5E_BEGIN_TRY {
@@ -306,7 +308,7 @@ error:
} H5E_END_TRY;
options->err_stat=1;
- return ret;
+ return nfound_total;
}
diff --git a/tools/lib/h5diff_dset.c b/tools/lib/h5diff_dset.c
index 993a00f..602cce7 100644
--- a/tools/lib/h5diff_dset.c
+++ b/tools/lib/h5diff_dset.c
@@ -515,7 +515,8 @@ hsize_t diff_datasetid( hid_t did1,
}
} /* hyperslab read */
-
+ }/*cmp*/
+
/*-------------------------------------------------------------------------
* compare attributes
* the if condition refers to cases when the dataset is a referenced object
@@ -523,9 +524,7 @@ hsize_t diff_datasetid( hid_t did1,
*/
if (obj1_name)
- diff_attr(did1,did2,obj1_name,obj2_name,options);
-
- }/*cmp*/
+ nfound += diff_attr(did1,did2,obj1_name,obj2_name,options);
/*-------------------------------------------------------------------------
* close
diff --git a/tools/lib/h5trav.h b/tools/lib/h5trav.h
index 07801da..c11d835 100644
--- a/tools/lib/h5trav.h
+++ b/tools/lib/h5trav.h
@@ -29,6 +29,9 @@
*-------------------------------------------------------------------------
*/
+typedef H5G_obj_t H5G_obj_t1;
+
+
typedef struct trav_info_t {
char *name;
H5G_obj_t type;
@@ -133,3 +136,5 @@ void trav_table_addlink(trav_table_t *table,
#endif /* H5TRAV_H__ */
+
+
diff --git a/tools/testfiles/h5diff_25.txt b/tools/testfiles/h5diff_25.txt
index 25d2669..6bfdbf4 100644
--- a/tools/testfiles/h5diff_25.txt
+++ b/tools/testfiles/h5diff_25.txt
@@ -1,5 +1,5 @@
#############################
Expected output for 'h5diff h5diff_types.h5 h5diff_types.h5 -v l1 l1'
#############################
-soft link: </l1> and </l1>
+link : </l1> and </l1>
0 differences found
diff --git a/tools/testfiles/h5diff_28.txt b/tools/testfiles/h5diff_28.txt
index 767e9fc..bbe6f00 100644
--- a/tools/testfiles/h5diff_28.txt
+++ b/tools/testfiles/h5diff_28.txt
@@ -1,5 +1,5 @@
#############################
Expected output for 'h5diff h5diff_types.h5 h5diff_types.h5 -v l1 l2'
#############################
-soft link: </l1> and </l2>
+link : </l1> and </l2>
1 differences found
diff --git a/tools/testfiles/h5diff_70.txt b/tools/testfiles/h5diff_70.txt
index d2edf7a..dce3717 100644
--- a/tools/testfiles/h5diff_70.txt
+++ b/tools/testfiles/h5diff_70.txt
@@ -9,7 +9,604 @@ file1 file2
dataset: </dset> and </dset>
</dset> and </dset> are empty datasets
+attribute: <string of </dset>> and <string of </dset>>
+size: [2] [2]
+position string of </dset> string of </dset> difference
+------------------------------------------------------------
+[ 0 ] a z
+[ 0 ] b z
+[ 1 ] d z
+[ 1 ] e z
+4 differences found
+attribute: <bitfield of </dset>> and <bitfield of </dset>>
+size: [2] [2]
+position bitfield of </dset> bitfield of </dset> difference
+------------------------------------------------------------
+[ 0 ] 1 0 1
+[ 1 ] 2 0 2
+2 differences found
+attribute: <opaque of </dset>> and <opaque of </dset>>
+size: [2] [2]
+position opaque of </dset> opaque of </dset> difference
+------------------------------------------------------------
+[ 0 ] 1 0 1
+[ 1 ] 2 0 2
+2 differences found
+attribute: <compound of </dset>> and <compound of </dset>>
+size: [2] [2]
+position compound of </dset> compound of </dset> difference
+------------------------------------------------------------
+[ 0 ] 1 0 1
+[ 0 ] 2 0 2
+[ 1 ] 3 0 3
+[ 1 ] 4 0 4
+4 differences found
+attribute: <reference of </dset>> and <reference of </dset>>
0 differences found
+attribute: <enum of </dset>> and <enum of </dset>>
+size: [2] [2]
+position enum of </dset> enum of </dset> difference
+------------------------------------------------------------
+[ 0 ] RED GREEN
+[ 1 ] RED GREEN
+2 differences found
+attribute: <vlen of </dset>> and <vlen of </dset>>
+size: [2] [2]
+position vlen of </dset> vlen of </dset> difference
+------------------------------------------------------------
+[ 0 ] 1 0 1
+[ 1 ] 2 0 2
+[ 1 ] 3 0 3
+3 differences found
+attribute: <array of </dset>> and <array of </dset>>
+size: [2] [2]
+position array of </dset> array of </dset> difference
+------------------------------------------------------------
+[ 0 ] 1 0 1
+[ 0 ] 2 0 2
+[ 0 ] 3 0 3
+[ 1 ] 4 0 4
+[ 1 ] 5 0 5
+[ 1 ] 6 0 6
+6 differences found
+attribute: <integer of </dset>> and <integer of </dset>>
+size: [2] [2]
+position integer of </dset> integer of </dset> difference
+------------------------------------------------------------
+[ 0 ] 1 0 1
+[ 1 ] 2 0 2
+2 differences found
+attribute: <float of </dset>> and <float of </dset>>
+size: [2] [2]
+position float of </dset> float of </dset> difference
+------------------------------------------------------------
+[ 0 ] 1 0 1
+[ 1 ] 2 0 2
+2 differences found
+attribute: <string2D of </dset>> and <string2D of </dset>>
+size: [3x2] [3x2]
+position string2D of </dset> string2D of </dset> difference
+------------------------------------------------------------
+[ 0 0 ] a z
+[ 0 0 ] b z
+[ 0 1 ] c z
+[ 0 1 ] d z
+[ 1 0 ] e z
+[ 1 0 ] f z
+[ 1 1 ] g z
+[ 1 1 ] h z
+[ 2 0 ] i z
+[ 2 0 ] j z
+[ 2 1 ] k z
+[ 2 1 ] l z
+12 differences found
+attribute: <bitfield2D of </dset>> and <bitfield2D of </dset>>
+size: [3x2] [3x2]
+position bitfield2D of </dset> bitfield2D of </dset> difference
+------------------------------------------------------------
+[ 0 0 ] 1 0 1
+[ 0 1 ] 2 0 2
+[ 1 0 ] 3 0 3
+[ 1 1 ] 4 0 4
+[ 2 0 ] 5 0 5
+[ 2 1 ] 6 0 6
+6 differences found
+attribute: <opaque2D of </dset>> and <opaque2D of </dset>>
+size: [3x2] [3x2]
+position opaque2D of </dset> opaque2D of </dset> difference
+------------------------------------------------------------
+[ 0 0 ] 1 0 1
+[ 0 1 ] 2 0 2
+[ 1 0 ] 3 0 3
+[ 1 1 ] 4 0 4
+[ 2 0 ] 5 0 5
+[ 2 1 ] 6 0 6
+6 differences found
+attribute: <compound2D of </dset>> and <compound2D of </dset>>
+size: [3x2] [3x2]
+position compound2D of </dset> compound2D of </dset> difference
+------------------------------------------------------------
+[ 0 0 ] 1 0 1
+[ 0 0 ] 2 0 2
+[ 0 1 ] 3 0 3
+[ 0 1 ] 4 0 4
+[ 1 0 ] 5 0 5
+[ 1 0 ] 6 0 6
+[ 1 1 ] 7 0 7
+[ 1 1 ] 8 0 8
+[ 2 0 ] 9 0 9
+[ 2 0 ] 10 0 10
+[ 2 1 ] 11 0 11
+[ 2 1 ] 12 0 12
+12 differences found
+attribute: <reference2D of </dset>> and <reference2D of </dset>>
+0 differences found
+attribute: <enum2D of </dset>> and <enum2D of </dset>>
+size: [3x2] [3x2]
+position enum2D of </dset> enum2D of </dset> difference
+------------------------------------------------------------
+[ 0 0 ] RED GREEN
+[ 0 1 ] RED GREEN
+[ 1 0 ] RED GREEN
+[ 1 1 ] RED GREEN
+[ 2 0 ] RED GREEN
+[ 2 1 ] RED GREEN
+6 differences found
+attribute: <vlen2D of </dset>> and <vlen2D of </dset>>
+size: [3x2] [3x2]
+position vlen2D of </dset> vlen2D of </dset> difference
+------------------------------------------------------------
+[ 0 1 ] 1 0 1
+[ 1 0 ] 2 0 2
+[ 1 0 ] 3 0 3
+[ 1 1 ] 4 0 4
+[ 1 1 ] 5 0 5
+[ 2 0 ] 6 0 6
+[ 2 0 ] 7 0 7
+[ 2 0 ] 8 0 8
+[ 2 1 ] 9 0 9
+[ 2 1 ] 10 0 10
+[ 2 1 ] 11 0 11
+11 differences found
+attribute: <array2D of </dset>> and <array2D of </dset>>
+size: [3x2] [3x2]
+position array2D of </dset> array2D of </dset> difference
+------------------------------------------------------------
+[ 0 0 ] 1 0 1
+[ 0 0 ] 2 0 2
+[ 0 0 ] 3 0 3
+[ 0 1 ] 4 0 4
+[ 0 1 ] 5 0 5
+[ 0 1 ] 6 0 6
+[ 1 0 ] 7 0 7
+[ 1 0 ] 8 0 8
+[ 1 0 ] 9 0 9
+[ 1 1 ] 10 0 10
+[ 1 1 ] 11 0 11
+[ 1 1 ] 12 0 12
+[ 2 0 ] 13 0 13
+[ 2 0 ] 14 0 14
+[ 2 0 ] 15 0 15
+[ 2 1 ] 16 0 16
+[ 2 1 ] 17 0 17
+[ 2 1 ] 18 0 18
+18 differences found
+attribute: <integer2D of </dset>> and <integer2D of </dset>>
+size: [3x2] [3x2]
+position integer2D of </dset> integer2D of </dset> difference
+------------------------------------------------------------
+[ 0 0 ] 1 0 1
+[ 0 1 ] 2 0 2
+[ 1 0 ] 3 0 3
+[ 1 1 ] 4 0 4
+[ 2 0 ] 5 0 5
+[ 2 1 ] 6 0 6
+6 differences found
+attribute: <float2D of </dset>> and <float2D of </dset>>
+size: [3x2] [3x2]
+position float2D of </dset> float2D of </dset> difference
+------------------------------------------------------------
+[ 0 0 ] 1 0 1
+[ 0 1 ] 2 0 2
+[ 1 0 ] 3 0 3
+[ 1 1 ] 4 0 4
+[ 2 0 ] 5 0 5
+[ 2 1 ] 6 0 6
+6 differences found
+attribute: <string3D of </dset>> and <string3D of </dset>>
+size: [4x3x2] [4x3x2]
+position string3D of </dset> string3D of </dset> difference
+------------------------------------------------------------
+[ 0 0 0 ] a z
+[ 0 0 0 ] b z
+[ 0 0 1 ] c z
+[ 0 0 1 ] d z
+[ 0 1 0 ] e z
+[ 0 1 0 ] f z
+[ 0 1 1 ] g z
+[ 0 1 1 ] h z
+[ 0 2 0 ] i z
+[ 0 2 0 ] j z
+[ 0 2 1 ] k z
+[ 0 2 1 ] l z
+[ 1 0 0 ] m z
+[ 1 0 0 ] n z
+[ 1 0 1 ] p z
+[ 1 0 1 ] q z
+[ 1 1 0 ] r z
+[ 1 1 0 ] s z
+[ 1 1 1 ] t z
+[ 1 1 1 ] u z
+[ 1 2 0 ] v z
+[ 1 2 0 ] w z
+[ 1 2 1 ] x z
+[ 2 0 0 ] A z
+[ 2 0 0 ] B z
+[ 2 0 1 ] C z
+[ 2 0 1 ] D z
+[ 2 1 0 ] E z
+[ 2 1 0 ] F z
+[ 2 1 1 ] G z
+[ 2 1 1 ] H z
+[ 2 2 0 ] I z
+[ 2 2 0 ] J z
+[ 2 2 1 ] K z
+[ 2 2 1 ] L z
+[ 3 0 0 ] M z
+[ 3 0 0 ] N z
+[ 3 0 1 ] P z
+[ 3 0 1 ] Q z
+[ 3 1 0 ] R z
+[ 3 1 0 ] S z
+[ 3 1 1 ] T z
+[ 3 1 1 ] U z
+[ 3 2 0 ] V z
+[ 3 2 0 ] W z
+[ 3 2 1 ] X z
+[ 3 2 1 ] Z z
+47 differences found
+attribute: <bitfield3D of </dset>> and <bitfield3D of </dset>>
+size: [4x3x2] [4x3x2]
+position bitfield3D of </dset> bitfield3D of </dset> difference
+------------------------------------------------------------
+[ 0 0 0 ] 1 0 1
+[ 0 0 1 ] 2 0 2
+[ 0 1 0 ] 3 0 3
+[ 0 1 1 ] 4 0 4
+[ 0 2 0 ] 5 0 5
+[ 0 2 1 ] 6 0 6
+[ 1 0 0 ] 7 0 7
+[ 1 0 1 ] 8 0 8
+[ 1 1 0 ] 9 0 9
+[ 1 1 1 ] 10 0 10
+[ 1 2 0 ] 11 0 11
+[ 1 2 1 ] 12 0 12
+[ 2 0 0 ] 13 0 13
+[ 2 0 1 ] 14 0 14
+[ 2 1 0 ] 15 0 15
+[ 2 1 1 ] 16 0 16
+[ 2 2 0 ] 17 0 17
+[ 2 2 1 ] 18 0 18
+[ 3 0 0 ] 19 0 19
+[ 3 0 1 ] 20 0 20
+[ 3 1 0 ] 21 0 21
+[ 3 1 1 ] 22 0 22
+[ 3 2 0 ] 23 0 23
+[ 3 2 1 ] 24 0 24
+24 differences found
+attribute: <opaque3D of </dset>> and <opaque3D of </dset>>
+size: [4x3x2] [4x3x2]
+position opaque3D of </dset> opaque3D of </dset> difference
+------------------------------------------------------------
+[ 0 0 0 ] 1 0 1
+[ 0 0 1 ] 2 0 2
+[ 0 1 0 ] 3 0 3
+[ 0 1 1 ] 4 0 4
+[ 0 2 0 ] 5 0 5
+[ 0 2 1 ] 6 0 6
+[ 1 0 0 ] 7 0 7
+[ 1 0 1 ] 8 0 8
+[ 1 1 0 ] 9 0 9
+[ 1 1 1 ] 10 0 10
+[ 1 2 0 ] 11 0 11
+[ 1 2 1 ] 12 0 12
+[ 2 0 0 ] 13 0 13
+[ 2 0 1 ] 14 0 14
+[ 2 1 0 ] 15 0 15
+[ 2 1 1 ] 16 0 16
+[ 2 2 0 ] 17 0 17
+[ 2 2 1 ] 18 0 18
+[ 3 0 0 ] 19 0 19
+[ 3 0 1 ] 20 0 20
+[ 3 1 0 ] 21 0 21
+[ 3 1 1 ] 22 0 22
+[ 3 2 0 ] 23 0 23
+[ 3 2 1 ] 24 0 24
+24 differences found
+attribute: <compound3D of </dset>> and <compound3D of </dset>>
+size: [4x3x2] [4x3x2]
+position compound3D of </dset> compound3D of </dset> difference
+------------------------------------------------------------
+[ 0 0 0 ] 1 0 1
+[ 0 0 0 ] 2 0 2
+[ 0 0 1 ] 3 0 3
+[ 0 0 1 ] 4 0 4
+[ 0 1 0 ] 5 0 5
+[ 0 1 0 ] 6 0 6
+[ 0 1 1 ] 7 0 7
+[ 0 1 1 ] 8 0 8
+[ 0 2 0 ] 9 0 9
+[ 0 2 0 ] 10 0 10
+[ 0 2 1 ] 11 0 11
+[ 0 2 1 ] 12 0 12
+[ 1 0 0 ] 13 0 13
+[ 1 0 0 ] 14 0 14
+[ 1 0 1 ] 15 0 15
+[ 1 0 1 ] 16 0 16
+[ 1 1 0 ] 17 0 17
+[ 1 1 0 ] 18 0 18
+[ 1 1 1 ] 19 0 19
+[ 1 1 1 ] 20 0 20
+[ 1 2 0 ] 21 0 21
+[ 1 2 0 ] 22 0 22
+[ 1 2 1 ] 23 0 23
+[ 1 2 1 ] 24 0 24
+[ 2 0 0 ] 25 0 25
+[ 2 0 0 ] 26 0 26
+[ 2 0 1 ] 27 0 27
+[ 2 0 1 ] 28 0 28
+[ 2 1 0 ] 29 0 29
+[ 2 1 0 ] 30 0 30
+[ 2 1 1 ] 31 0 31
+[ 2 1 1 ] 32 0 32
+[ 2 2 0 ] 33 0 33
+[ 2 2 0 ] 34 0 34
+[ 2 2 1 ] 35 0 35
+[ 2 2 1 ] 36 0 36
+[ 3 0 0 ] 37 0 37
+[ 3 0 0 ] 38 0 38
+[ 3 0 1 ] 39 0 39
+[ 3 0 1 ] 40 0 40
+[ 3 1 0 ] 41 0 41
+[ 3 1 0 ] 42 0 42
+[ 3 1 1 ] 43 0 43
+[ 3 1 1 ] 44 0 44
+[ 3 2 0 ] 45 0 45
+[ 3 2 0 ] 46 0 46
+[ 3 2 1 ] 47 0 47
+[ 3 2 1 ] 48 0 48
+48 differences found
+attribute: <reference3D of </dset>> and <reference3D of </dset>>
+0 differences found
+attribute: <enum3D of </dset>> and <enum3D of </dset>>
+size: [4x3x2] [4x3x2]
+position enum3D of </dset> enum3D of </dset> difference
+------------------------------------------------------------
+[ 0 0 0 ] GREEN RED
+[ 0 0 1 ] GREEN RED
+[ 0 1 0 ] GREEN RED
+[ 0 1 1 ] GREEN RED
+[ 0 2 0 ] GREEN RED
+[ 0 2 1 ] GREEN RED
+[ 1 0 0 ] GREEN RED
+[ 1 0 1 ] GREEN RED
+[ 1 1 0 ] GREEN RED
+[ 1 1 1 ] GREEN RED
+[ 1 2 0 ] GREEN RED
+[ 1 2 1 ] GREEN RED
+[ 2 0 0 ] GREEN RED
+[ 2 0 1 ] GREEN RED
+[ 2 1 0 ] GREEN RED
+[ 2 1 1 ] GREEN RED
+[ 2 2 0 ] GREEN RED
+[ 2 2 1 ] GREEN RED
+[ 3 0 0 ] GREEN RED
+[ 3 0 1 ] GREEN RED
+[ 3 1 0 ] GREEN RED
+[ 3 1 1 ] GREEN RED
+[ 3 2 0 ] GREEN RED
+[ 3 2 1 ] GREEN RED
+24 differences found
+attribute: <vlen3D of </dset>> and <vlen3D of </dset>>
+size: [4x3x2] [4x3x2]
+position vlen3D of </dset> vlen3D of </dset> difference
+------------------------------------------------------------
+[ 0 0 1 ] 1 0 1
+[ 0 1 0 ] 2 0 2
+[ 0 1 1 ] 3 0 3
+[ 0 2 0 ] 4 0 4
+[ 0 2 1 ] 5 0 5
+[ 1 0 0 ] 6 0 6
+[ 1 0 0 ] 7 0 7
+[ 1 0 1 ] 8 0 8
+[ 1 0 1 ] 9 0 9
+[ 1 1 0 ] 10 0 10
+[ 1 1 0 ] 11 0 11
+[ 1 1 1 ] 12 0 12
+[ 1 1 1 ] 13 0 13
+[ 1 2 0 ] 14 0 14
+[ 1 2 0 ] 15 0 15
+[ 1 2 1 ] 16 0 16
+[ 1 2 1 ] 17 0 17
+[ 2 0 0 ] 18 0 18
+[ 2 0 0 ] 19 0 19
+[ 2 0 0 ] 20 0 20
+[ 2 0 1 ] 21 0 21
+[ 2 0 1 ] 22 0 22
+[ 2 0 1 ] 23 0 23
+[ 2 1 0 ] 24 0 24
+[ 2 1 0 ] 25 0 25
+[ 2 1 0 ] 26 0 26
+[ 2 1 1 ] 27 0 27
+[ 2 1 1 ] 28 0 28
+[ 2 1 1 ] 29 0 29
+[ 2 2 0 ] 30 0 30
+[ 2 2 0 ] 31 0 31
+[ 2 2 0 ] 32 0 32
+[ 2 2 1 ] 33 0 33
+[ 2 2 1 ] 34 0 34
+[ 2 2 1 ] 35 0 35
+[ 3 0 0 ] 36 0 36
+[ 3 0 0 ] 37 0 37
+[ 3 0 0 ] 38 0 38
+[ 3 0 0 ] 39 0 39
+[ 3 0 1 ] 40 0 40
+[ 3 0 1 ] 41 0 41
+[ 3 0 1 ] 42 0 42
+[ 3 0 1 ] 43 0 43
+[ 3 1 0 ] 44 0 44
+[ 3 1 0 ] 45 0 45
+[ 3 1 0 ] 46 0 46
+[ 3 1 0 ] 47 0 47
+[ 3 1 1 ] 48 0 48
+[ 3 1 1 ] 49 0 49
+[ 3 1 1 ] 50 0 50
+[ 3 1 1 ] 51 0 51
+[ 3 2 0 ] 52 0 52
+[ 3 2 0 ] 53 0 53
+[ 3 2 0 ] 54 0 54
+[ 3 2 0 ] 55 0 55
+[ 3 2 1 ] 56 0 56
+[ 3 2 1 ] 57 0 57
+[ 3 2 1 ] 58 0 58
+[ 3 2 1 ] 59 0 59
+59 differences found
+attribute: <array3D of </dset>> and <array3D of </dset>>
+size: [4x3x2] [4x3x2]
+position array3D of </dset> array3D of </dset> difference
+------------------------------------------------------------
+[ 0 0 0 ] 1 0 1
+[ 0 0 0 ] 2 0 2
+[ 0 0 0 ] 3 0 3
+[ 0 0 1 ] 4 0 4
+[ 0 0 1 ] 5 0 5
+[ 0 0 1 ] 6 0 6
+[ 0 1 0 ] 7 0 7
+[ 0 1 0 ] 8 0 8
+[ 0 1 0 ] 9 0 9
+[ 0 1 1 ] 10 0 10
+[ 0 1 1 ] 11 0 11
+[ 0 1 1 ] 12 0 12
+[ 0 2 0 ] 13 0 13
+[ 0 2 0 ] 14 0 14
+[ 0 2 0 ] 15 0 15
+[ 0 2 1 ] 16 0 16
+[ 0 2 1 ] 17 0 17
+[ 0 2 1 ] 18 0 18
+[ 1 0 0 ] 19 0 19
+[ 1 0 0 ] 20 0 20
+[ 1 0 0 ] 21 0 21
+[ 1 0 1 ] 22 0 22
+[ 1 0 1 ] 23 0 23
+[ 1 0 1 ] 24 0 24
+[ 1 1 0 ] 25 0 25
+[ 1 1 0 ] 26 0 26
+[ 1 1 0 ] 27 0 27
+[ 1 1 1 ] 28 0 28
+[ 1 1 1 ] 29 0 29
+[ 1 1 1 ] 30 0 30
+[ 1 2 0 ] 31 0 31
+[ 1 2 0 ] 32 0 32
+[ 1 2 0 ] 33 0 33
+[ 1 2 1 ] 34 0 34
+[ 1 2 1 ] 35 0 35
+[ 1 2 1 ] 36 0 36
+[ 2 0 0 ] 37 0 37
+[ 2 0 0 ] 38 0 38
+[ 2 0 0 ] 39 0 39
+[ 2 0 1 ] 40 0 40
+[ 2 0 1 ] 41 0 41
+[ 2 0 1 ] 42 0 42
+[ 2 1 0 ] 43 0 43
+[ 2 1 0 ] 44 0 44
+[ 2 1 0 ] 45 0 45
+[ 2 1 1 ] 46 0 46
+[ 2 1 1 ] 47 0 47
+[ 2 1 1 ] 48 0 48
+[ 2 2 0 ] 49 0 49
+[ 2 2 0 ] 50 0 50
+[ 2 2 0 ] 51 0 51
+[ 2 2 1 ] 52 0 52
+[ 2 2 1 ] 53 0 53
+[ 2 2 1 ] 54 0 54
+[ 3 0 0 ] 55 0 55
+[ 3 0 0 ] 56 0 56
+[ 3 0 0 ] 57 0 57
+[ 3 0 1 ] 58 0 58
+[ 3 0 1 ] 59 0 59
+[ 3 0 1 ] 60 0 60
+[ 3 1 0 ] 61 0 61
+[ 3 1 0 ] 62 0 62
+[ 3 1 0 ] 63 0 63
+[ 3 1 1 ] 64 0 64
+[ 3 1 1 ] 65 0 65
+[ 3 1 1 ] 66 0 66
+[ 3 2 0 ] 67 0 67
+[ 3 2 0 ] 68 0 68
+[ 3 2 0 ] 69 0 69
+[ 3 2 1 ] 70 0 70
+[ 3 2 1 ] 71 0 71
+[ 3 2 1 ] 72 0 72
+72 differences found
+attribute: <integer3D of </dset>> and <integer3D of </dset>>
+size: [4x3x2] [4x3x2]
+position integer3D of </dset> integer3D of </dset> difference
+------------------------------------------------------------
+[ 0 0 0 ] 1 0 1
+[ 0 0 1 ] 2 0 2
+[ 0 1 0 ] 3 0 3
+[ 0 1 1 ] 4 0 4
+[ 0 2 0 ] 5 0 5
+[ 0 2 1 ] 6 0 6
+[ 1 0 0 ] 7 0 7
+[ 1 0 1 ] 8 0 8
+[ 1 1 0 ] 9 0 9
+[ 1 1 1 ] 10 0 10
+[ 1 2 0 ] 11 0 11
+[ 1 2 1 ] 12 0 12
+[ 2 0 0 ] 13 0 13
+[ 2 0 1 ] 14 0 14
+[ 2 1 0 ] 15 0 15
+[ 2 1 1 ] 16 0 16
+[ 2 2 0 ] 17 0 17
+[ 2 2 1 ] 18 0 18
+[ 3 0 0 ] 19 0 19
+[ 3 0 1 ] 20 0 20
+[ 3 1 0 ] 21 0 21
+[ 3 1 1 ] 22 0 22
+[ 3 2 0 ] 23 0 23
+[ 3 2 1 ] 24 0 24
+24 differences found
+attribute: <float3D of </dset>> and <float3D of </dset>>
+size: [4x3x2] [4x3x2]
+position float3D of </dset> float3D of </dset> difference
+------------------------------------------------------------
+[ 0 0 0 ] 1 0 1
+[ 0 0 1 ] 2 0 2
+[ 0 1 0 ] 3 0 3
+[ 0 1 1 ] 4 0 4
+[ 0 2 0 ] 5 0 5
+[ 0 2 1 ] 6 0 6
+[ 1 0 0 ] 7 0 7
+[ 1 0 1 ] 8 0 8
+[ 1 1 0 ] 9 0 9
+[ 1 1 1 ] 10 0 10
+[ 1 2 0 ] 11 0 11
+[ 1 2 1 ] 12 0 12
+[ 2 0 0 ] 13 0 13
+[ 2 0 1 ] 14 0 14
+[ 2 1 0 ] 15 0 15
+[ 2 1 1 ] 16 0 16
+[ 2 2 0 ] 17 0 17
+[ 2 2 1 ] 18 0 18
+[ 3 0 0 ] 19 0 19
+[ 3 0 1 ] 20 0 20
+[ 3 1 0 ] 21 0 21
+[ 3 1 1 ] 22 0 22
+[ 3 2 0 ] 23 0 23
+[ 3 2 1 ] 24 0 24
+24 differences found
+456 differences found
group : </g1> and </g1>
0 differences found
attribute: <string of </g1>> and <string of </g1>>