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-rw-r--r--tools/src/h5import/h5import.c2
-rw-r--r--tools/test/h5repack/h5repacktst.c2
-rw-r--r--tools/test/misc/h5perf_gentest.c666
-rw-r--r--tools/test/misc/talign.c16
4 files changed, 343 insertions, 343 deletions
diff --git a/tools/src/h5import/h5import.c b/tools/src/h5import/h5import.c
index 16c0d8c..1eef5ab 100644
--- a/tools/src/h5import/h5import.c
+++ b/tools/src/h5import/h5import.c
@@ -3753,7 +3753,7 @@ void setDefaultValues(struct Input *in, int count)
in->path.count = 1;
HDstrcpy(temp, "dataset");
- sprintf(num, "%d", count);
+ HDsprintf(num, "%d", count);
HDstrcat(temp, num);
HDstrcpy(in->path.group[0], temp);
diff --git a/tools/test/h5repack/h5repacktst.c b/tools/test/h5repack/h5repacktst.c
index 057cbbd..ec8df3c 100644
--- a/tools/test/h5repack/h5repacktst.c
+++ b/tools/test/h5repack/h5repacktst.c
@@ -4120,7 +4120,7 @@ int write_dset_in(hid_t loc_id,
dbuf = (double*)HDmalloc( size );
if (NULL == dbuf)
{
- printf ("\nError: Cannot allocate memory for \"arrayd\" data buffer size %dMB.\n", (int) size / 1000000 );
+ HDprintf ("\nError: Cannot allocate memory for \"arrayd\" data buffer size %dMB.\n", (int) size / 1000000 );
goto out;
}
diff --git a/tools/test/misc/h5perf_gentest.c b/tools/test/misc/h5perf_gentest.c
index 3784278..f50e5fb 100644
--- a/tools/test/misc/h5perf_gentest.c
+++ b/tools/test/misc/h5perf_gentest.c
@@ -10,8 +10,8 @@
* help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/*****************************************************************************
- This test generates attributes, groups, and datasets of many types. It
- creates a large number of attributes, groups, and datasets by specifying
+ This test generates attributes, groups, and datasets of many types. It
+ creates a large number of attributes, groups, and datasets by specifying
-a, -g, -d options respectively. Using "-h" option to see details.
Programmer: Peter Cao <xcao@hdfgroup.org>, Jan. 2013
@@ -31,7 +31,7 @@
#define MAXVLEN 10
#define FIXED_LEN 8
-typedef enum { SOLID=0, LIQUID, GAS, PLASMA } phase_t;
+typedef enum { SOLID=0, LIQUID, GAS, PLASMA } phase_t;
typedef struct {
int i;
@@ -43,24 +43,24 @@ typedef struct {
float f_array[FIXED_LEN];
hvl_t i_vlen;
char *s_vlen;
-} test_comp_t;
+} test_comp_t;
typedef struct {
int zipcode;
char *city;
-} zipcode_t;
+} zipcode_t;
int add_attrs(hid_t oid, int idx);
int add_attr(hid_t oid, const char *name, hid_t tid, hid_t sid, void *buf) ;
-herr_t create_perf_test_file(const char *fname, int ngrps, int ndsets,
- int nattrs, hsize_t nrows, hsize_t dim0, hsize_t chunk, int vlen,
- int compressed, int latest);
+herr_t create_perf_test_file(const char *fname, int ngrps, int ndsets,
+ int nattrs, hsize_t nrows, hsize_t dim0, hsize_t chunk, int vlen,
+ int compressed, int latest);
int main (int argc, char *argv[])
{
char fname[32];
- int i, ngrps=NGROUPS, ndsets=NDSETS, nattrs=NATTRS, dim0=DIM0,
- chunk=DIM0/10+1, nrows=NROWS, vlen=MAXVLEN, l=0, z=0;
+ int i, ngrps=NGROUPS, ndsets=NDSETS, nattrs=NATTRS, dim0=DIM0,
+ chunk=DIM0/10+1, nrows=NROWS, vlen=MAXVLEN, l=0, z=0;
memset(fname, 0, 32);
for (i=1; i<argc; i++) {
@@ -83,92 +83,92 @@ int main (int argc, char *argv[])
else if (strcmp(argv[i], "-l")==0)
l = 1;
else if (strcmp(argv[i], "-z")==0)
- z = 1;
+ z = 1;
else if (strcmp(argv[i], "-h")==0) {
- printf("\nOPTONS:\n");
- printf("\t-f F:\tname of the test file (default: %s).\n", FNAME);
- printf("\t-g N:\tnumber of top level groups (default: %d).\n", NGROUPS);
- printf("\t-d N:\tnumber of datasets (default: %d).\n", NDSETS);
- printf("\t-a N:\tnumber of attributes (default: %d).\n", NATTRS);
- printf("\t-r N:\tnumber of rows in the large compound dataset (default: %d).\n", NROWS);
- printf("\t-s N:\tsize of dim0 in datasets (default: %d).\n", DIM0);
- printf("\t-c N:\tchunk size of dim0 (default: %d).\n", (DIM0/10+1));
- printf("\t-v N:\tmax vlen size (default: %d).\n", MAXVLEN);
- printf("\t-l:\tuse latest format (default: no).\n");
- printf("\t-z:\tuse gzip compression (default: no).\n");
- printf("\t-h:\tthis help information.\n");
- printf("Example:\n");
- printf("\t./a.out -f test.h5 -g 10000 -d 5000 -a 500 -r 10000 -s 200 -c 20 -v 40 -l -z\n\n");
+ HDprintf("\nOPTONS:\n");
+ HDprintf("\t-f F:\tname of the test file (default: %s).\n", FNAME);
+ HDprintf("\t-g N:\tnumber of top level groups (default: %d).\n", NGROUPS);
+ HDprintf("\t-d N:\tnumber of datasets (default: %d).\n", NDSETS);
+ HDprintf("\t-a N:\tnumber of attributes (default: %d).\n", NATTRS);
+ HDprintf("\t-r N:\tnumber of rows in the large compound dataset (default: %d).\n", NROWS);
+ HDprintf("\t-s N:\tsize of dim0 in datasets (default: %d).\n", DIM0);
+ HDprintf("\t-c N:\tchunk size of dim0 (default: %d).\n", (DIM0/10+1));
+ HDprintf("\t-v N:\tmax vlen size (default: %d).\n", MAXVLEN);
+ HDprintf("\t-l:\tuse latest format (default: no).\n");
+ HDprintf("\t-z:\tuse gzip compression (default: no).\n");
+ HDprintf("\t-h:\tthis help information.\n");
+ HDprintf("Example:\n");
+ HDprintf("\t./a.out -f test.h5 -g 10000 -d 5000 -a 500 -r 10000 -s 200 -c 20 -v 40 -l -z\n\n");
exit(0);
}
}
-
+
if (strlen(fname)<=0)
- sprintf(fname, FNAME);
+ HDsprintf(fname, FNAME);
+
+ create_perf_test_file(fname, ngrps, ndsets, nattrs, (hsize_t)nrows,
+ (hsize_t)dim0, (hsize_t)chunk, vlen, z, l);
- create_perf_test_file(fname, ngrps, ndsets, nattrs, (hsize_t)nrows,
- (hsize_t)dim0, (hsize_t)chunk, vlen, z, l);
-
return 0;
}
/*****************************************************************************
- This function generates attributes, groups, and datasets of many types.
+ This function generates attributes, groups, and datasets of many types.
Parameters:
- fname: file_name.
- ngrps: number of top level groups.
- ndsets: number of datasets.
- attrs: number of attributes.
- nrow: number of rows in a dataset.
- chunk: chunk size (single number).
- vlen: max vlen size.
- comp: use latest format.
- latest: use gzip comnpression.
-
+ fname: file_name.
+ ngrps: number of top level groups.
+ ndsets: number of datasets.
+ attrs: number of attributes.
+ nrow: number of rows in a dataset.
+ chunk: chunk size (single number).
+ vlen: max vlen size.
+ comp: use latest format.
+ latest: use gzip comnpression.
+
Return: Non-negative on success/Negative on failure
-
+
Programmer: Peter Cao <xcao@hdfgroup.org>, Jan. 2013
****************************************************************************/
-herr_t create_perf_test_file(const char *fname, int ngrps, int ndsets,
- int nattrs, hsize_t nrows, hsize_t dim0, hsize_t chunk, int vlen,
- int compressed, int latest)
+herr_t create_perf_test_file(const char *fname, int ngrps, int ndsets,
+ int nattrs, hsize_t nrows, hsize_t dim0, hsize_t chunk, int vlen,
+ int compressed, int latest)
{
int i, j, k;
- hid_t fid, sid_null, sid_scalar, sid_1d, sid_2d, did, aid, sid_2, sid_large,
- fapl=H5P_DEFAULT, dcpl=H5P_DEFAULT, gid1, gid2, cmp_tid, tid_str,
- tid_enum, tid_array_f, tid_vlen_i, tid_vlen_s;
+ hid_t fid, sid_null, sid_scalar, sid_1d, sid_2d, did, aid, sid_2, sid_large,
+ fapl=H5P_DEFAULT, dcpl=H5P_DEFAULT, gid1, gid2, cmp_tid, tid_str,
+ tid_enum, tid_array_f, tid_vlen_i, tid_vlen_s;
char name[32], tmp_name1[32], tmp_name2[32], tmp_name3[32];
- hsize_t dims[1]={dim0}, dims2d[2]={dim0, (dim0/4+1)}, dims_array[1]={FIXED_LEN},
- dim1[1]={2};
+ hsize_t dims[1]={dim0}, dims2d[2]={dim0, (dim0/4+1)}, dims_array[1]={FIXED_LEN},
+ dim1[1]={2};
char *enum_names[4] = {"SOLID", "LIQUID", "GAS", "PLASMA"};
test_comp_t *buf_comp=NULL, *buf_comp_large=NULL;
int *buf_int=NULL;
float (*buf_float_a)[FIXED_LEN]=NULL;
double **buf_double2d=NULL;
hvl_t *buf_vlen_i=NULL;
- char (*buf_str)[FIXED_LEN];
- char **buf_vlen_s=NULL;
- hobj_ref_t buf_ref[2];
- hdset_reg_ref_t buf_reg_ref[2];
+ char (*buf_str)[FIXED_LEN];
+ char **buf_vlen_s=NULL;
+ hobj_ref_t buf_ref[2];
+ hdset_reg_ref_t buf_reg_ref[2];
size_t offset, len;
herr_t status;
- char *names[NTYPES] = { "int", "ulong", "float", "double", "fixed string",
- "enum", "fixed float array", "vlen int array", "vlen strings"};
- hid_t types[NTYPES] = { H5T_NATIVE_INT, H5T_NATIVE_UINT64, H5T_NATIVE_FLOAT,
+ char *names[NTYPES] = { "int", "ulong", "float", "double", "fixed string",
+ "enum", "fixed float array", "vlen int array", "vlen strings"};
+ hid_t types[NTYPES] = { H5T_NATIVE_INT, H5T_NATIVE_UINT64, H5T_NATIVE_FLOAT,
H5T_NATIVE_DOUBLE, tid_str, tid_enum, tid_array_f, tid_vlen_i, tid_vlen_s};
- hsize_t coords[4][2] = { {0, 1}, {3, 5}, {1, 0}, {2, 4}}, start=0, stride=1, count=1;
-
- if (nrows < NROWS) nrows = NROWS;
+ hsize_t coords[4][2] = { {0, 1}, {3, 5}, {1, 0}, {2, 4}}, start=0, stride=1, count=1;
+
+ if (nrows < NROWS) nrows = NROWS;
if (ngrps<NGROUPS) ngrps=NGROUPS;
- if (ndsets<NDSETS) ndsets=NDSETS;
- if (nattrs<NATTRS) nattrs=NATTRS;
- if (dim0<DIM0) dim0=DIM0;
+ if (ndsets<NDSETS) ndsets=NDSETS;
+ if (nattrs<NATTRS) nattrs=NATTRS;
+ if (dim0<DIM0) dim0=DIM0;
if (chunk>dim0) chunk=dim0/4;
if (chunk<1) chunk = 1;
- if (vlen<1) vlen = MAXVLEN;
+ if (vlen<1) vlen = MAXVLEN;
- /* create fixed string datatype */
+ /* create fixed string datatype */
types[4] = tid_str = H5Tcopy (H5T_C_S1);
H5Tset_size (tid_str, FIXED_LEN);
@@ -181,15 +181,15 @@ herr_t create_perf_test_file(const char *fname, int ngrps, int ndsets,
/* create float array datatype */
types[6] = tid_array_f = H5Tarray_create (H5T_NATIVE_FLOAT, 1, dims_array);
-
+
/* create variable length integer datatypes */
types[7] = tid_vlen_i = H5Tvlen_create (H5T_NATIVE_INT);
-
+
/* create variable length string datatype */
types[8] = tid_vlen_s = H5Tcopy (H5T_C_S1);
H5Tset_size (tid_vlen_s, H5T_VARIABLE);
-
- /* create compound datatypes */
+
+ /* create compound datatypes */
cmp_tid = H5Tcreate (H5T_COMPOUND, sizeof (test_comp_t));
offset = 0;
for (i=0; i<NTYPES-2; i++) {
@@ -197,31 +197,31 @@ herr_t create_perf_test_file(const char *fname, int ngrps, int ndsets,
offset += H5Tget_size(types[i]);
}
- H5Tinsert(cmp_tid, names[7], offset, types[7]);
- offset += sizeof (hvl_t);
- H5Tinsert(cmp_tid, names[8], offset, types[8]);
+ H5Tinsert(cmp_tid, names[7], offset, types[7]);
+ offset += sizeof (hvl_t);
+ H5Tinsert(cmp_tid, names[8], offset, types[8]);
- /* create dataspace */
+ /* create dataspace */
sid_1d = H5Screate_simple (1, dims, NULL);
sid_2d = H5Screate_simple (2, dims2d, NULL);
sid_2 = H5Screate_simple (1, dim1, NULL);
- sid_large = H5Screate_simple (1, &nrows, NULL);
- sid_null = H5Screate (H5S_NULL);
- sid_scalar = H5Screate (H5S_SCALAR);
-
- /* create fid access property */
- fapl = H5Pcreate (H5P_FILE_ACCESS);
+ sid_large = H5Screate_simple (1, &nrows, NULL);
+ sid_null = H5Screate (H5S_NULL);
+ sid_scalar = H5Screate (H5S_SCALAR);
+
+ /* create fid access property */
+ fapl = H5Pcreate (H5P_FILE_ACCESS);
H5Pset_libver_bounds (fapl, H5F_LIBVER_LATEST, H5F_LIBVER_LATEST);
- /* create dataset creation property */
+ /* create dataset creation property */
dcpl = H5Pcreate (H5P_DATASET_CREATE);
- /* set dataset chunk */
+ /* set dataset chunk */
if (chunk>0) {
H5Pset_chunk (dcpl, 1, &chunk);
}
- /* set dataset compression */
+ /* set dataset compression */
if (compressed) {
if (chunk<=0) {
chunk = dim0/10+1;;
@@ -229,54 +229,54 @@ herr_t create_perf_test_file(const char *fname, int ngrps, int ndsets,
}
H5Pset_shuffle (dcpl);
H5Pset_deflate (dcpl, 6);
- }
+ }
- /* allocate buffers */
+ /* allocate buffers */
buf_comp = (test_comp_t *)calloc(dim0, sizeof(test_comp_t));
buf_comp_large = (test_comp_t *)calloc(nrows, sizeof(test_comp_t));
buf_int = (int *)calloc(dim0, sizeof(int));
buf_float_a = malloc(dim0*sizeof(*buf_float_a));
- buf_vlen_i = (hvl_t *)calloc(dim0, sizeof (hvl_t));
+ buf_vlen_i = (hvl_t *)calloc(dim0, sizeof (hvl_t));
buf_vlen_s = (char **)calloc(dim0, sizeof(char *));
- buf_str = malloc(dim0*sizeof (*buf_str));
+ buf_str = malloc(dim0*sizeof (*buf_str));
- /* allocate array of doulbe pointers */
- buf_double2d = (double **)calloc(dims2d[0],sizeof(double *));
- /* allocate a contigous chunk of memory for the data */
- buf_double2d[0] = (double *)calloc( dims2d[0]*dims2d[1],sizeof(double) );
- /* assign memory city to pointer array */
- for (i=1; i <dims2d[0]; i++) buf_double2d[i] = buf_double2d[0]+i*dims2d[1];
+ /* allocate array of doulbe pointers */
+ buf_double2d = (double **)calloc(dims2d[0],sizeof(double *));
+ /* allocate a contigous chunk of memory for the data */
+ buf_double2d[0] = (double *)calloc( dims2d[0]*dims2d[1],sizeof(double) );
+ /* assign memory city to pointer array */
+ for (i=1; i <dims2d[0]; i++) buf_double2d[i] = buf_double2d[0]+i*dims2d[1];
- /* fill buffer values */
- len = 1;
+ /* fill buffer values */
+ len = 1;
for (i=0; i<dims[0]; i++) {
buf_comp[i].i = buf_int[i] = i-2147483648;
buf_comp[i].l = 0xffffffffffffffff-i;
buf_comp[i].f = 1.0/(i+1.0);
buf_comp[i].d = 987654321.0*i+1.0/(i+1.0);
buf_comp[i].e = (phase_t) (i % (int) (PLASMA + 1));
-
- for (j=0; j<FIXED_LEN; j++) {
- buf_comp[i].f_array[j] = buf_float_a[i][j] = i*100+j;
- buf_str[i][j] = 'a' + (i%26);
- }
- buf_str[i][FIXED_LEN-1] = 0;
+
+ for (j=0; j<FIXED_LEN; j++) {
+ buf_comp[i].f_array[j] = buf_float_a[i][j] = i*100+j;
+ buf_str[i][j] = 'a' + (i%26);
+ }
+ buf_str[i][FIXED_LEN-1] = 0;
strcpy(buf_comp[i].s, buf_str[i]);
-
- len = (1-cos(i/8.0))/2*vlen+1;
- if (!i) len = vlen;
- buf_vlen_i[i].len = len;
- buf_vlen_i[i].p = (int *)calloc(len, sizeof(int));
- for (j=0; j<len; j++) ((int*)(buf_vlen_i[i].p))[j] = i*100+j;
- buf_comp[i].i_vlen = buf_vlen_i[i];
-
- buf_vlen_s[i] = (char *)calloc(len, sizeof(char));
- for (j=0; j<len-1; j++)
- buf_vlen_s[i][j] = j%26+'A';
- buf_comp[i].s_vlen = buf_vlen_s[i];
-
- for (j=0; j<dims2d[1]; j++)
- buf_double2d[i][j] = i+j/10000.0;
+
+ len = (1-cos(i/8.0))/2*vlen+1;
+ if (!i) len = vlen;
+ buf_vlen_i[i].len = len;
+ buf_vlen_i[i].p = (int *)calloc(len, sizeof(int));
+ for (j=0; j<len; j++) ((int*)(buf_vlen_i[i].p))[j] = i*100+j;
+ buf_comp[i].i_vlen = buf_vlen_i[i];
+
+ buf_vlen_s[i] = (char *)calloc(len, sizeof(char));
+ for (j=0; j<len-1; j++)
+ buf_vlen_s[i][j] = j%26+'A';
+ buf_comp[i].s_vlen = buf_vlen_s[i];
+
+ for (j=0; j<dims2d[1]; j++)
+ buf_double2d[i][j] = i+j/10000.0;
}
for (i=0; i<nrows; i++) {
@@ -289,147 +289,147 @@ herr_t create_perf_test_file(const char *fname, int ngrps, int ndsets,
buf_comp_large[i].f_array[j] = i*100+j;
buf_comp_large[i].s[j] = 'a' + (i%26);
}
- len = i%vlen+1;
+ len = i%vlen+1;
buf_comp_large[i].i_vlen.len = len;
buf_comp_large[i].i_vlen.p = (int *)calloc(len, sizeof(int));
for (j=0; j<len; j++) ((int*)(buf_comp_large[i].i_vlen.p))[j] = i*100+j;
buf_comp_large[i].s_vlen = (char *)calloc(i+2, sizeof(char));
for (j=0; j<i+1; j++) (buf_comp_large[i].s_vlen)[j] = j%26+'A';
}
-
- /* create file */
+
+ /* create file */
if (latest)
fid = H5Fcreate (fname, H5F_ACC_TRUNC, H5P_DEFAULT, fapl);
else
fid = H5Fcreate (fname, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
- add_attrs(fid, 0);
+ add_attrs(fid, 0);
- sprintf(name, "a cmp ds of %d rows", nrows);
- did = H5Dcreate (fid, name, cmp_tid, sid_large, H5P_DEFAULT, dcpl, H5P_DEFAULT);
- H5Dwrite (did, cmp_tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf_comp_large);
- add_attrs(did, 0);
- H5Dclose(did);
+ HDsprintf(name, "a cmp ds of %d rows", nrows);
+ did = H5Dcreate (fid, name, cmp_tid, sid_large, H5P_DEFAULT, dcpl, H5P_DEFAULT);
+ H5Dwrite (did, cmp_tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf_comp_large);
+ add_attrs(did, 0);
+ H5Dclose(did);
- // /* add attributes*/
+ // /* add attributes*/
gid1 = H5Gcreate (fid, "attributes", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- if (nattrs<1) nattrs = 1;
- i=0;
- while (i<nattrs) i += add_attrs(gid1, i);
- H5Gclose(gid1);
-
- /* add many sub groups to a group*/
+ if (nattrs<1) nattrs = 1;
+ i=0;
+ while (i<nattrs) i += add_attrs(gid1, i);
+ H5Gclose(gid1);
+
+ /* add many sub groups to a group*/
gid1 = H5Gcreate (fid, "groups", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- add_attrs(gid1, 0);
+ add_attrs(gid1, 0);
for (i=0; i<ngrps; i++) {
- /* create sub groups */
- sprintf(name, "g%02d", i);
+ /* create sub groups */
+ HDsprintf(name, "g%02d", i);
gid2 = H5Gcreate (gid1, name, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- if (i<10) add_attrs(gid2, 0);
- H5Gclose(gid2);
- }
- H5Gclose(gid1);
-
- /* add many datasets to a group */
- gid1 = H5Gcreate (fid, "datasets", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- add_attrs(gid1, 0);
+ if (i<10) add_attrs(gid2, 0);
+ H5Gclose(gid2);
+ }
+ H5Gclose(gid1);
+
+ /* add many datasets to a group */
+ gid1 = H5Gcreate (fid, "datasets", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ add_attrs(gid1, 0);
for (j=0; j<ndsets; j+=12) {
- /* 1 add a null dataset */
- sprintf(name, "%05d null dataset", j);
+ /* 1 add a null dataset */
+ HDsprintf(name, "%05d null dataset", j);
did = H5Dcreate (gid1, name, H5T_STD_I32LE, sid_null, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- if (!j) add_attrs(did, j);
- H5Dclose(did);
+ if (!j) add_attrs(did, j);
+ H5Dclose(did);
- /* 2 add scalar int point */
- sprintf(name, "%05d scalar int point", j);
+ /* 2 add scalar int point */
+ HDsprintf(name, "%05d scalar int point", j);
did = H5Dcreate (gid1, name, H5T_NATIVE_INT, sid_scalar, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- H5Dwrite (did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, &j);
- if (!j) add_attrs(did, j);
- H5Dclose(did);
-
- /* 3 scalar vlen string */
- sprintf(name, "%05d scalar vlen string", j);
+ H5Dwrite (did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, &j);
+ if (!j) add_attrs(did, j);
+ H5Dclose(did);
+
+ /* 3 scalar vlen string */
+ HDsprintf(name, "%05d scalar vlen string", j);
did = H5Dcreate (gid1, name, tid_vlen_s, sid_scalar, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- H5Dwrite (did, tid_vlen_s, H5S_ALL, H5S_ALL, H5P_DEFAULT, &buf_vlen_s[0]);
- if (!j) add_attrs(did, j);
- H5Dclose(did);
-
- /* 4 add fixed-length float array */
- sprintf(name, "%05d fixed-length float array", j);
- did = H5Dcreate (gid1, name, tid_array_f, sid_1d, H5P_DEFAULT, dcpl, H5P_DEFAULT);
- H5Dwrite (did, tid_array_f, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf_float_a);
- if (!j) add_attrs(did, j);
- H5Dclose(did);
-
- /* 5 add fixed-length strings */
- sprintf(name, "%05d fixed-length strings", j);
- did = H5Dcreate (gid1, name, tid_str, sid_1d, H5P_DEFAULT, dcpl, H5P_DEFAULT);
- H5Dwrite (did, tid_str, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf_str);
- if (!j) add_attrs(did, j);
- H5Dclose(did);
-
- /* 6 add compound data */
- sprintf(name, "%05d compund data", j);
- did = H5Dcreate (gid1, name, cmp_tid, sid_1d, H5P_DEFAULT, dcpl, H5P_DEFAULT);
- H5Dwrite (did, cmp_tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf_comp);
- if (!j) add_attrs(did, j);
- H5Dclose(did);
-
- /* 7 add 2D double */
- sprintf(name, "%05d 2D double", j);
- strcpy (tmp_name1, name);
- did = H5Dcreate (gid1, name, H5T_NATIVE_DOUBLE, sid_2d, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- H5Dwrite (did, H5T_NATIVE_DOUBLE, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf_double2d[0]);
- if (!j) add_attrs(did, j);
- H5Dclose(did);
-
- /* 8 add 1D int array */
- sprintf(name, "%05d 1D int array", j);
+ H5Dwrite (did, tid_vlen_s, H5S_ALL, H5S_ALL, H5P_DEFAULT, &buf_vlen_s[0]);
+ if (!j) add_attrs(did, j);
+ H5Dclose(did);
+
+ /* 4 add fixed-length float array */
+ HDsprintf(name, "%05d fixed-length float array", j);
+ did = H5Dcreate (gid1, name, tid_array_f, sid_1d, H5P_DEFAULT, dcpl, H5P_DEFAULT);
+ H5Dwrite (did, tid_array_f, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf_float_a);
+ if (!j) add_attrs(did, j);
+ H5Dclose(did);
+
+ /* 5 add fixed-length strings */
+ HDsprintf(name, "%05d fixed-length strings", j);
+ did = H5Dcreate (gid1, name, tid_str, sid_1d, H5P_DEFAULT, dcpl, H5P_DEFAULT);
+ H5Dwrite (did, tid_str, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf_str);
+ if (!j) add_attrs(did, j);
+ H5Dclose(did);
+
+ /* 6 add compound data */
+ HDsprintf(name, "%05d compund data", j);
+ did = H5Dcreate (gid1, name, cmp_tid, sid_1d, H5P_DEFAULT, dcpl, H5P_DEFAULT);
+ H5Dwrite (did, cmp_tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf_comp);
+ if (!j) add_attrs(did, j);
+ H5Dclose(did);
+
+ /* 7 add 2D double */
+ HDsprintf(name, "%05d 2D double", j);
+ strcpy (tmp_name1, name);
+ did = H5Dcreate (gid1, name, H5T_NATIVE_DOUBLE, sid_2d, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ H5Dwrite (did, H5T_NATIVE_DOUBLE, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf_double2d[0]);
+ if (!j) add_attrs(did, j);
+ H5Dclose(did);
+
+ /* 8 add 1D int array */
+ HDsprintf(name, "%05d 1D int array", j);
did = H5Dcreate (gid1, name, H5T_NATIVE_INT, sid_1d, H5P_DEFAULT, dcpl, H5P_DEFAULT);
- H5Dwrite (did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf_int);
- if (!j) add_attrs(did, j);
- H5Dclose(did);
-
- /* 9 add vlen int array */
- sprintf(name, "%05d vlen int array", j);
- strcpy (tmp_name2, name);
+ H5Dwrite (did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf_int);
+ if (!j) add_attrs(did, j);
+ H5Dclose(did);
+
+ /* 9 add vlen int array */
+ HDsprintf(name, "%05d vlen int array", j);
+ strcpy (tmp_name2, name);
did = H5Dcreate (gid1, name, tid_vlen_i, sid_1d, H5P_DEFAULT, dcpl, H5P_DEFAULT);
- H5Dwrite (did, tid_vlen_i, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf_vlen_i);
- if (!j) add_attrs(did, j);
- H5Dclose(did);
+ H5Dwrite (did, tid_vlen_i, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf_vlen_i);
+ if (!j) add_attrs(did, j);
+ H5Dclose(did);
- /* 10 add vlen strings */
- sprintf(name, "%05d vlen strings", j);
- strcpy (tmp_name3, name);
+ /* 10 add vlen strings */
+ HDsprintf(name, "%05d vlen strings", j);
+ strcpy (tmp_name3, name);
did = H5Dcreate (gid1, name, tid_vlen_s, sid_1d, H5P_DEFAULT, dcpl, H5P_DEFAULT);
- H5Dwrite (did, tid_vlen_s, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf_vlen_s);
- if (!j) add_attrs(did, j);
- H5Dclose(did);
-
- /* 11 add object refs */
- H5Rcreate(&buf_ref[0],gid1, ".", H5R_OBJECT, (hid_t)-1);
- H5Rcreate(&buf_ref[1],gid1, tmp_name3, H5R_OBJECT, (hid_t)-1);
- sprintf(name, "%05d obj refs", j);
+ H5Dwrite (did, tid_vlen_s, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf_vlen_s);
+ if (!j) add_attrs(did, j);
+ H5Dclose(did);
+
+ /* 11 add object refs */
+ H5Rcreate(&buf_ref[0],gid1, ".", H5R_OBJECT, (hid_t)-1);
+ H5Rcreate(&buf_ref[1],gid1, tmp_name3, H5R_OBJECT, (hid_t)-1);
+ HDsprintf(name, "%05d obj refs", j);
did = H5Dcreate (gid1, name, H5T_STD_REF_OBJ, sid_2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- H5Dwrite (did, H5T_STD_REF_OBJ, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf_ref);
- if (!j) add_attrs(did, j);
- H5Dclose(did);
-
- /* 12 add region refs */
- H5Sselect_elements (sid_2d, H5S_SELECT_SET, 4, coords[0]);
- H5Rcreate(&buf_reg_ref[0],gid1, tmp_name1, H5R_DATASET_REGION, sid_2d);
- H5Sselect_none(sid_2d);
- count = dims[0]/2+1;
- H5Sselect_hyperslab (sid_1d, H5S_SELECT_SET, &start, &stride, &count,NULL);
- H5Rcreate(&buf_reg_ref[1],gid1, tmp_name2, H5R_DATASET_REGION, sid_1d);
- H5Sselect_none(sid_1d);
- sprintf(name, "%05d region refs", j);
+ H5Dwrite (did, H5T_STD_REF_OBJ, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf_ref);
+ if (!j) add_attrs(did, j);
+ H5Dclose(did);
+
+ /* 12 add region refs */
+ H5Sselect_elements (sid_2d, H5S_SELECT_SET, 4, coords[0]);
+ H5Rcreate(&buf_reg_ref[0],gid1, tmp_name1, H5R_DATASET_REGION, sid_2d);
+ H5Sselect_none(sid_2d);
+ count = dims[0]/2+1;
+ H5Sselect_hyperslab (sid_1d, H5S_SELECT_SET, &start, &stride, &count,NULL);
+ H5Rcreate(&buf_reg_ref[1],gid1, tmp_name2, H5R_DATASET_REGION, sid_1d);
+ H5Sselect_none(sid_1d);
+ HDsprintf(name, "%05d region refs", j);
did = H5Dcreate (gid1, name, H5T_STD_REF_DSETREG, sid_2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
- H5Dwrite (did, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf_reg_ref);
- if (!j) add_attrs(did, j);
- H5Dclose(did);
- }
- H5Gclose(gid1);
-
+ H5Dwrite (did, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf_reg_ref);
+ if (!j) add_attrs(did, j);
+ H5Dclose(did);
+ }
+ H5Gclose(gid1);
+
H5Tclose (tid_array_f);
H5Tclose (tid_vlen_i);
H5Tclose (tid_vlen_s);
@@ -447,22 +447,22 @@ herr_t create_perf_test_file(const char *fname, int ngrps, int ndsets,
H5Fclose (fid);
for (i=0; i<dims[0]; i++) {
- if (buf_vlen_i[i].p) free(buf_vlen_i[i].p);
- if (buf_vlen_s[i]) free(buf_vlen_s[i]);
- }
+ if (buf_vlen_i[i].p) free(buf_vlen_i[i].p);
+ if (buf_vlen_s[i]) free(buf_vlen_s[i]);
+ }
for (i=0; i<nrows; i++) {
- if (buf_comp_large[i].i_vlen.p) free(buf_comp_large[i].i_vlen.p);
- if (buf_comp_large[i].s_vlen) free(buf_comp_large[i].s_vlen);
- }
-
+ if (buf_comp_large[i].i_vlen.p) free(buf_comp_large[i].i_vlen.p);
+ if (buf_comp_large[i].s_vlen) free(buf_comp_large[i].s_vlen);
+ }
+
free (buf_comp);
free (buf_comp_large);
free (buf_int);
free (buf_float_a);
free (buf_double2d[0]);
free (buf_double2d);
- free (buf_str);
+ free (buf_str);
free(buf_vlen_i);
free(buf_vlen_s);
@@ -470,34 +470,34 @@ herr_t create_perf_test_file(const char *fname, int ngrps, int ndsets,
}
/* add a single attribute */
-int add_attr(hid_t oid, const char *name, hid_t tid, hid_t sid, void *buf)
+int add_attr(hid_t oid, const char *name, hid_t tid, hid_t sid, void *buf)
{
hid_t aid;
aid = H5Acreate (oid, name, tid, sid, H5P_DEFAULT, H5P_DEFAULT);
- if (aid <0)
- return 0;
-
- H5Awrite(aid, tid, buf);
+ if (aid <0)
+ return 0;
+
+ H5Awrite(aid, tid, buf);
H5Aclose(aid);
-
- return 1;
+
+ return 1;
}
-/*
+/*
adds different types of attributes to an object.
-
- returns the number of attributes added to the objects.
+
+ returns the number of attributes added to the objects.
*/
-int add_attrs(hid_t oid, int idx)
+int add_attrs(hid_t oid, int idx)
{
char name[32];
int i0, i1, i2, j, nattrs=0;
- hid_t aid, tid, tid1, sid;
+ hid_t aid, tid, tid1, sid;
hvl_t i_vlen[4];
- hobj_ref_t ref;
- zipcode_t cmp_data[4];
+ hobj_ref_t ref;
+ zipcode_t cmp_data[4];
unsigned int i = 0xffffffff;
long long l = -2147483647;
float f = 123456789.987654321;
@@ -505,22 +505,22 @@ int add_attrs(hid_t oid, int idx)
char *s[7] = {"Parting", "is such", "sweeter", "sorrow."};
float f_array[4] = {1.0, 2.22, 3.333, 4.444};
char *s_vlen[4] = {"Parting", "is such", "sweet", "sorrow."};
- hsize_t dims1[1]={1}, dims2[1]={4}, dims3[2]={3,5};
- int int3d[4][3][5];
- size_t offset = 0;
-
- for (i0=0; i0<4; i0++) {
- i_vlen[i0].len = (i0+1);
- i_vlen[i0].p = (int *)calloc(i_vlen[i0].len, sizeof(int));
- for (j=0; j<i_vlen[i0].len; j++)
- ((int *)i_vlen[i0].p)[j] = i0*100+j;
- for (i1=0; i1<3; i1++) {
- for (i2=0; i2<5; i2++)
- int3d[i0][i1][i2] = i0*i1-i1*i2+i0*i2;
- }
+ hsize_t dims1[1]={1}, dims2[1]={4}, dims3[2]={3,5};
+ int int3d[4][3][5];
+ size_t offset = 0;
+
+ for (i0=0; i0<4; i0++) {
+ i_vlen[i0].len = (i0+1);
+ i_vlen[i0].p = (int *)calloc(i_vlen[i0].len, sizeof(int));
+ for (j=0; j<i_vlen[i0].len; j++)
+ ((int *)i_vlen[i0].p)[j] = i0*100+j;
+ for (i1=0; i1<3; i1++) {
+ for (i2=0; i2<5; i2++)
+ int3d[i0][i1][i2] = i0*i1-i1*i2+i0*i2;
+ }
}
- cmp_data[0].zipcode = 01001;
+ cmp_data[0].zipcode = 01001;
cmp_data[0].city = "Agawam, Massachusetts";
cmp_data[1].zipcode = 99950;
cmp_data[1].city = "Ketchikan, Alaska";
@@ -528,82 +528,82 @@ int add_attrs(hid_t oid, int idx)
cmp_data[2].city = "Holtsville, New York";
cmp_data[3].zipcode = 61820;
cmp_data[3].city = "Champaign, Illinois";
-
- /* 1 scalar point */
- sid = H5Screate (H5S_SCALAR);
- sprintf(name, "%05d scalar int", idx);
- nattrs += add_attr(oid, name, H5T_NATIVE_UINT, sid, &i);
- sprintf(name, "%05d scalar ulong", idx);
- nattrs += add_attr(oid, name, H5T_NATIVE_INT64, sid, &l);
- sprintf(name, "%05d scalar str", idx);
- tid = H5Tcopy (H5T_C_S1);
+
+ /* 1 scalar point */
+ sid = H5Screate (H5S_SCALAR);
+ HDsprintf(name, "%05d scalar int", idx);
+ nattrs += add_attr(oid, name, H5T_NATIVE_UINT, sid, &i);
+ HDsprintf(name, "%05d scalar ulong", idx);
+ nattrs += add_attr(oid, name, H5T_NATIVE_INT64, sid, &l);
+ HDsprintf(name, "%05d scalar str", idx);
+ tid = H5Tcopy (H5T_C_S1);
H5Tset_size (tid, H5T_VARIABLE);
- nattrs += add_attr(oid, name, tid, sid, &s[2]);
- H5Tclose(tid);
- H5Sclose(sid);
+ nattrs += add_attr(oid, name, tid, sid, &s[2]);
+ H5Tclose(tid);
+ H5Sclose(sid);
- /* 4 single point */
- sid = H5Screate_simple (1, dims1, NULL);
+ /* 4 single point */
+ sid = H5Screate_simple (1, dims1, NULL);
H5Rcreate(&ref, oid, ".", H5R_OBJECT, (hid_t)-1);
- sprintf(name, "%05d single float", idx);
- nattrs += add_attr(oid, name, H5T_NATIVE_FLOAT, sid, &f);
- sprintf(name, "%05d single double", idx);
- nattrs += add_attr(oid, name, H5T_NATIVE_DOUBLE, sid, &d);
- sprintf(name, "%05d single obj_ref", idx);
- nattrs += add_attr(oid, name, H5T_STD_REF_OBJ, sid, &ref);
- H5Sclose(sid);
-
- /* 7 fixed length 1D array */
- sid = H5Screate_simple (1, dims1, NULL);
- tid = H5Tarray_create (H5T_NATIVE_FLOAT, 1, dims2);
- sprintf(name, "%05d array float", idx);
+ HDsprintf(name, "%05d single float", idx);
+ nattrs += add_attr(oid, name, H5T_NATIVE_FLOAT, sid, &f);
+ HDsprintf(name, "%05d single double", idx);
+ nattrs += add_attr(oid, name, H5T_NATIVE_DOUBLE, sid, &d);
+ HDsprintf(name, "%05d single obj_ref", idx);
+ nattrs += add_attr(oid, name, H5T_STD_REF_OBJ, sid, &ref);
+ H5Sclose(sid);
+
+ /* 7 fixed length 1D array */
+ sid = H5Screate_simple (1, dims1, NULL);
+ tid = H5Tarray_create (H5T_NATIVE_FLOAT, 1, dims2);
+ HDsprintf(name, "%05d array float", idx);
nattrs += add_attr(oid, name, tid, sid, &f_array[0]);
- H5Tclose(tid);
- tid = H5Tcopy (H5T_C_S1);
- H5Tset_size (tid, strlen(s[0])+1);
- tid1 = H5Tarray_create (tid, 1, dims2);
- sprintf(name, "%05d array str", idx);
- nattrs += add_attr(oid, name, tid1, sid, s);
- H5Tclose(tid1);
- H5Tclose(tid);
- H5Sclose(sid);
-
- /* 9 fixed length 2D int arrays */
- sid = H5Screate_simple (1, dims2, NULL);
- tid = H5Tarray_create (H5T_NATIVE_INT, 2, dims3);
- sprintf(name, "%05d array int 2D", idx);
+ H5Tclose(tid);
+ tid = H5Tcopy (H5T_C_S1);
+ H5Tset_size (tid, strlen(s[0])+1);
+ tid1 = H5Tarray_create (tid, 1, dims2);
+ HDsprintf(name, "%05d array str", idx);
+ nattrs += add_attr(oid, name, tid1, sid, s);
+ H5Tclose(tid1);
+ H5Tclose(tid);
+ H5Sclose(sid);
+
+ /* 9 fixed length 2D int arrays */
+ sid = H5Screate_simple (1, dims2, NULL);
+ tid = H5Tarray_create (H5T_NATIVE_INT, 2, dims3);
+ HDsprintf(name, "%05d array int 2D", idx);
nattrs += add_attr(oid, name, tid, sid, int3d[0][0]);
- H5Tclose(tid);
- H5Sclose(sid);
-
- /* 10 variable length arrays */
- sid = H5Screate_simple (1, dims2, NULL);
- tid = H5Tcopy (H5T_C_S1);
- H5Tset_size (tid, H5T_VARIABLE);
- sprintf(name, "%05d vlen strings", idx);
+ H5Tclose(tid);
+ H5Sclose(sid);
+
+ /* 10 variable length arrays */
+ sid = H5Screate_simple (1, dims2, NULL);
+ tid = H5Tcopy (H5T_C_S1);
+ H5Tset_size (tid, H5T_VARIABLE);
+ HDsprintf(name, "%05d vlen strings", idx);
nattrs += add_attr(oid, name, tid, sid, s_vlen);
- H5Tclose(tid);
- tid = H5Tvlen_create (H5T_NATIVE_INT);;
- sprintf(name, "%05d vlen int array", idx);
+ H5Tclose(tid);
+ tid = H5Tvlen_create (H5T_NATIVE_INT);;
+ HDsprintf(name, "%05d vlen int array", idx);
nattrs += add_attr(oid, name, tid, sid, i_vlen);
- H5Tclose(tid);
- H5Sclose(sid);
-
- /* 12 compound data */
- sid = H5Screate_simple (1, dims2, NULL);
- tid = H5Tcreate (H5T_COMPOUND, sizeof (zipcode_t));
- tid1 = H5Tcopy (H5T_C_S1);
- H5Tset_size (tid1, H5T_VARIABLE);
+ H5Tclose(tid);
+ H5Sclose(sid);
+
+ /* 12 compound data */
+ sid = H5Screate_simple (1, dims2, NULL);
+ tid = H5Tcreate (H5T_COMPOUND, sizeof (zipcode_t));
+ tid1 = H5Tcopy (H5T_C_S1);
+ H5Tset_size (tid1, H5T_VARIABLE);
H5Tinsert (tid, "zip code", 0, H5T_NATIVE_INT); offset += sizeof(H5T_NATIVE_INT);
H5Tinsert (tid, "City", offset, tid1); offset += sizeof(char *);
- sprintf(name, "%05d compound data", idx);
+ HDsprintf(name, "%05d compound data", idx);
nattrs += add_attr(oid, name, tid, sid, cmp_data);
- H5Tclose(tid1);
- H5Tclose(tid);
- H5Sclose(sid);
-
- for (i0=0; i0<4; i0++)
- free(i_vlen[i0].p);
-
- return nattrs;
+ H5Tclose(tid1);
+ H5Tclose(tid);
+ H5Sclose(sid);
+
+ for (i0=0; i0<4; i0++)
+ free(i_vlen[i0].p);
+
+ return nattrs;
}
diff --git a/tools/test/misc/talign.c b/tools/test/misc/talign.c
index 7f1f038..944674d 100644
--- a/tools/test/misc/talign.c
+++ b/tools/test/misc/talign.c
@@ -53,12 +53,12 @@ int main(void)
HDprintf("%-70s", "Testing alignment in compound datatypes");
- HDstrcpy(string5, "Hi!");
+ strcpy(string5, "Hi!");
HDunlink(fname);
fil = H5Fcreate(fname, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
if (fil < 0) {
- HDputs("*FAILED*");
+ puts("*FAILED*");
return 1;
}
@@ -123,8 +123,8 @@ int main(void)
data = (char *)HDmalloc(H5Tget_size(fix));
if(!data) {
- HDperror("malloc() failed");
- HDabort();
+ perror("malloc() failed");
+ abort();
}
set = H5Dopen2(fil, setname, H5P_DEFAULT);
@@ -136,7 +136,7 @@ int main(void)
out:
if(error < 0) {
result = 1;
- HDputs("*FAILED - HDF5 library error*");
+ puts("*FAILED - HDF5 library error*");
} else if(!(H5_FLT_ABS_EQUAL(fok[0], fptr[0]))
|| !(H5_FLT_ABS_EQUAL(fok[1], fptr[1]))
|| !(H5_FLT_ABS_EQUAL(fnok[0], fptr[2]))
@@ -183,9 +183,9 @@ out:
(double)fok[1], (double)fptr[1],
(double)fnok[0], (double)fptr[2],
(double)fnok[1], (double)fptr[3]);
- HDputs("*FAILED - compound type alignmnent problem*");
+ puts("*FAILED - compound type alignmnent problem*");
} else {
- HDputs(" PASSED");
+ puts(" PASSED");
}
if(data)
@@ -200,7 +200,7 @@ out:
H5Pclose(plist);
H5Fclose(fil);
HDunlink(fname);
- HDfflush(stdout);
+ fflush(stdout);
return result;
}
generated by cgit v0.12 at 2024-11-06 19:29:37 (GMT)