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-rw-r--r--tools/h5dump.c1715
-rw-r--r--tools/h5dump.h21
2 files changed, 890 insertions, 846 deletions
diff --git a/tools/h5dump.c b/tools/h5dump.c
index d285cd4..fdcd12e 100644
--- a/tools/h5dump.c
+++ b/tools/h5dump.c
@@ -1,5 +1,13 @@
-#include "h5dump.h"
+/*-------------------------------------------------------------------------
+ *
+ * Copyright (C) 1998 National Center for Supercomputing Applications.
+ * All rights reserved.
+ *
+ *-------------------------------------------------------------------------
+ */
#include <stdio.h>
+
+#include "h5dump.h"
#include "H5private.h"
#include "h5tools.h"
@@ -9,88 +17,85 @@ static int d_status = 0;
static int unamedtype = 0; /* shared data type with no name */
static int prefix_len = 1024;
-static char *prefix;
static table_t *group_table = NULL, *dset_table = NULL, *type_table = NULL;
+static char *prefix;
static const dump_header *dump_header_format;
-
-static void dump_group (hid_t , const char* );
-static void dump_dataset (hid_t, const char*);
-static void dump_data (hid_t, int);
-static void dump_named_datatype (hid_t , const char *);
-
-void indentation(int);
+/* internal functions */
+static void dump_group(hid_t , const char* );
+static void dump_dataset(hid_t, const char*);
+static void dump_data(hid_t, int);
+static void dump_named_datatype(hid_t , const char *);
+static void dump_oid(hid_t oid);
static void print_enum(hid_t type);
+/* external functions */
+extern void indentation(int);
extern int print_data(hid_t, hid_t, int);
-static void dump_oid(hid_t oid);
-
static h5dump_t dataformat = {
-
- 0,/*raw*/
-
- "", /*fmt_raw*/
- "%d", /*fmt_int*/
- "%u", /*fmt_uint*/
- "%d", /*fmt_schar*/
- "%u", /*fmt_uchar*/
- "%d", /*fmt_short*/
- "%u", /*fmt_ushort*/
- "%ld", /*fmt_long*/
- "%lu", /*fmt_ulong*/
- NULL, /*fmt_llong*/
- NULL, /*fmt_ullong*/
- "%g", /*fmt_double*/
- "%g", /*fmt_float*/
-
- 0, /*ascii*/
- 0, /*str_locale*/
- 0,/*str_repeat*/
+ 0, /*raw*/
+
+ "", /*fmt_raw*/
+ "%d", /*fmt_int*/
+ "%u", /*fmt_uint*/
+ "%d", /*fmt_schar*/
+ "%u", /*fmt_uchar*/
+ "%d", /*fmt_short*/
+ "%u", /*fmt_ushort*/
+ "%ld", /*fmt_long*/
+ "%lu", /*fmt_ulong*/
+ NULL, /*fmt_llong*/
+ NULL, /*fmt_ullong*/
+ "%g", /*fmt_double*/
+ "%g", /*fmt_float*/
+
+ 0, /*ascii*/
+ 0, /*str_locale*/
+ 0, /*str_repeat*/
"[ ", /*arr_pre*/
", ", /*arr_sep*/
" ]", /*arr_suf*/
- 1, /*arr_linebreak*/
+ 1, /*arr_linebreak*/
- "", /*cmpd_name*/
- ",\n",/*cmpd_sep*/
- "{\n",/*cmpd_pre*/
- "}",/*cmpd_suf*/
- "\n",/*cmpd_end*/
+ "", /*cmpd_name*/
+ ",\n", /*cmpd_sep*/
+ "{\n", /*cmpd_pre*/
+ "}", /*cmpd_suf*/
+ "\n", /*cmpd_end*/
- "%s", /*elmt_fmt*/
- ",",/*elmt_suf1*/
+ "%s", /*elmt_fmt*/
+ ",", /*elmt_suf1*/
" ", /*elmt_suf2*/
- "", /*idx_n_fmt*/
- "",/*idx_sep*/
- "",/*idx_fmt*/
+ "", /*idx_n_fmt*/
+ "", /*idx_sep*/
+ "", /*idx_fmt*/
- 80, /*line_ncols*//*standard default columns*/
- 0, /*line_per_line*/
- "",/*line_pre*/
- "%s",/*line_1st*/
- "%s",/*line_cont*/
- "",/*line_suf*/
- "",/*line_sep*/
- 1,/*line_multi_new*/
- " ",/*line_indent*/
+ 80, /*line_ncols*//*standard default columns*/
+ 0, /*line_per_line*/
+ "", /*line_pre*/
+ "%s", /*line_1st*/
+ "%s", /*line_cont*/
+ "", /*line_suf*/
+ "", /*line_sep*/
+ 1, /*line_multi_new*/
+ " ", /*line_indent*/
- 1, /*skip_first*/
+ 1, /*skip_first*/
- 1,/*obj_hidefileno*/
- " %lu:%lu", /*obj_format*/
+ 1, /*obj_hidefileno*/
+ " %lu:%lu",/*obj_format*/
- 1, /*dset_hidefileno*/
+ 1, /*dset_hidefileno*/
"DATASET %lu:%lu ",/*dset_format*/
- "%s",/*dset_blockformat_pre*/
- "%s",/*dset_ptformat_pre*/
- "%s",/*dset_ptformat*/
-
-
+ "%s", /*dset_blockformat_pre*/
+ "%s", /*dset_ptformat_pre*/
+ "%s", /*dset_ptformat*/
};
+
static const dump_header standardformat = {
"standardformat", /*name*/
"HDF5", /*fileebgin*/
@@ -143,54 +148,53 @@ static const dump_header standardformat = {
};
static const dump_header xmlformat = {
- "xml", /*name*/
- "<FILE>", /*filebegin*/
- "</FILE>", /*fileend*/
- "<BOOTBLOCK>", /*bootblockbegin*/
- "</BOOTBLOCK>", /*bootblockend*/
- "<GROUP>", /*groupbegin*/
- "</GROUP>", /*groupend*/
- "<DATASET>", /*datasetbegin*/
+ "xml", /*name*/
+ "<FILE>", /*filebegin*/
+ "</FILE>", /*fileend*/
+ "<BOOTBLOCK>", /*bootblockbegin*/
+ "</BOOTBLOCK>", /*bootblockend*/
+ "<GROUP>", /*groupbegin*/
+ "</GROUP>", /*groupend*/
+ "<DATASET>", /*datasetbegin*/
"</DATASET>", /*datasetend*/
- "<ATTRIBUTE>", /*attributebegin*/
- "</ATTRIBUTE>", /*attributeend*/
- "<DATATYPE>", /*datatypeend*/
- "</DATATYPE>", /*datatypeend*/
- "<DATASPACE>", /*dataspacebegin*/
- "</DATASPACE>", /*dataspaceend*/
- "<DATA>", /*databegin*/
- "</DATA>", /*dataend*/
- "<SOFTLINK>", /*softlinkbegin*/
- "</SOFTLINK>", /*softlinkend*/
-
- "", /*fileblockbegin*/
- "", /*fileblockend*/
- "", /*bootblockblockbegin*/
- "", /*bootblockblockend*/
- "", /*groupblockbegin*/
- "", /*groupblockend*/
- "", /*datasetblockbegin*/
- "", /*datasetblockend*/
- "", /*attributeblockbegin*/
- "", /*attributeblockend*/
- "", /*datatypeblockbegin*/
- "", /*datatypeblockend*/
- "", /*dataspaceblockbegin*/
- "", /*dataspaceblockend*/
- "", /*datablockbegin*/
- "", /*datablockend*/
- "", /*softlinkblockbegin*/
- "", /*softlinkblockend*/
- "", /*strblockbegin*/
- "", /*strblockend*/
- "", /*enumblockbegin*/
- "", /*enumblockend*/
-
- "", /*dataspacedescriptionbegin*/
- "", /*dataspacedescriptionend*/
- "(", /*dataspacedimbegin*/
- ")", /*dataspacedimend*/
-
+ "<ATTRIBUTE>", /*attributebegin*/
+ "</ATTRIBUTE>", /*attributeend*/
+ "<DATATYPE>", /*datatypeend*/
+ "</DATATYPE>", /*datatypeend*/
+ "<DATASPACE>", /*dataspacebegin*/
+ "</DATASPACE>", /*dataspaceend*/
+ "<DATA>", /*databegin*/
+ "</DATA>", /*dataend*/
+ "<SOFTLINK>", /*softlinkbegin*/
+ "</SOFTLINK>", /*softlinkend*/
+
+ "", /*fileblockbegin*/
+ "", /*fileblockend*/
+ "", /*bootblockblockbegin*/
+ "", /*bootblockblockend*/
+ "", /*groupblockbegin*/
+ "", /*groupblockend*/
+ "", /*datasetblockbegin*/
+ "", /*datasetblockend*/
+ "", /*attributeblockbegin*/
+ "", /*attributeblockend*/
+ "", /*datatypeblockbegin*/
+ "", /*datatypeblockend*/
+ "", /*dataspaceblockbegin*/
+ "", /*dataspaceblockend*/
+ "", /*datablockbegin*/
+ "", /*datablockend*/
+ "", /*softlinkblockbegin*/
+ "", /*softlinkblockend*/
+ "", /*strblockbegin*/
+ "", /*strblockend*/
+ "", /*enumblockbegin*/
+ "", /*enumblockend*/
+
+ "", /*dataspacedescriptionbegin*/
+ "", /*dataspacedescriptionend*/
+ "(", /*dataspacedimbegin*/
+ ")", /*dataspacedimend*/
};
/*-------------------------------------------------------------------------
@@ -208,9 +212,9 @@ static const dump_header xmlformat = {
static void
usage(void)
{
-fprintf(stderr,
-"\nUsage of HDF5 Dumper:\n\n \
-h5dump [-h] [-bb] [-header] [-v] [-V] [-a <names>] [-d <names>] [-g <names>]\n \
+ fprintf(stderr,
+"\nUsage of HDF5 Dumper:\n\n\
+h5dump [-h] [-bb] [-header] [-v] [-V] [-a <names>] [-d <names>] [-g <names>]\n\
[-l <names>] [-t <names>] [-w <number>] <file>\n\n\
-h Print information on this command and exit.\n\
-bb Display the conent of the boot block. The default is not to display.\n\
@@ -223,14 +227,11 @@ h5dump [-h] [-bb] [-header] [-v] [-V] [-a <names>] [-d <names>] [-g <names>]\n
-l <names> Displays the value(s) of the specified soft link(s).\n\
-t <names> Display the specified named data type(s).\n\
-w <number> Display the information with the specified maximum number of columns.\n\
- \n\
+\n\
<names> is one or more appropriate object names.\n\
<number> is an integer greater than 1.\n\n");
}
-
-
-
/*-------------------------------------------------------------------------
* Function: print_datatype
*
@@ -244,186 +245,178 @@ h5dump [-h] [-bb] [-header] [-v] [-V] [-a <names>] [-d <names>] [-g <names>]\n
*
*-----------------------------------------------------------------------*/
static void
-print_datatype(hid_t type) {
-char *fname ;
-hid_t nmembers, mtype, str_type;
-int i, j, ndims, perm[H5DUMP_MAX_RANK];
-size_t dims[H5DUMP_MAX_RANK], size;
-H5T_str_t str_pad;
-H5T_cset_t cset;
-H5G_stat_t statbuf;
-
+print_datatype(hid_t type)
+{
+ char *fname ;
+ hid_t nmembers, mtype, str_type;
+ int i, j, ndims, perm[H5DUMP_MAX_RANK];
+ size_t dims[H5DUMP_MAX_RANK], size;
+ H5T_str_t str_pad;
+ H5T_cset_t cset;
+ H5G_stat_t statbuf;
hid_t super;
switch (H5Tget_class(type)) {
-
case H5T_INTEGER:
-
- if (H5Tequal(type, H5T_STD_I8BE))
- printf( "H5T_STD_I8BE");
- else if (H5Tequal(type, H5T_STD_I8LE))
- printf( "H5T_STD_I8LE");
- else if (H5Tequal(type, H5T_STD_I16BE))
- printf( "H5T_STD_I16BE");
- else if (H5Tequal(type, H5T_STD_I16LE))
- printf( "H5T_STD_I16LE");
- else if (H5Tequal(type, H5T_STD_I32BE))
- printf( "H5T_STD_I32BE");
- else if (H5Tequal(type, H5T_STD_I32LE))
- printf( "H5T_STD_I32LE");
- else if (H5Tequal(type, H5T_STD_I64BE))
- printf( "H5T_STD_I64BE");
- else if (H5Tequal(type, H5T_STD_I64LE))
- printf( "H5T_STD_I64LE");
- else if (H5Tequal(type, H5T_STD_U8BE))
- printf( "H5T_STD_U8BE");
- else if (H5Tequal(type, H5T_STD_U8LE))
- printf( "H5T_STD_U8LE");
- else if (H5Tequal(type, H5T_STD_U16BE))
- printf( "H5T_STD_U16BE");
- else if (H5Tequal(type, H5T_STD_U16LE))
- printf( "H5T_STD_U16LE");
- else if (H5Tequal(type, H5T_STD_U32BE))
- printf( "H5T_STD_U32BE");
- else if (H5Tequal(type, H5T_STD_U32LE))
- printf( "H5T_STD_U32LE");
- else if (H5Tequal(type, H5T_STD_U64BE))
- printf( "H5T_STD_U64BE");
- else if (H5Tequal(type, H5T_STD_U64LE))
- printf( "H5T_STD_U64LE");
- else if (H5Tequal(type, H5T_NATIVE_SCHAR))
- printf( "H5T_NATIVE_SCHAR");
- else if (H5Tequal(type, H5T_NATIVE_UCHAR))
- printf( "H5T_NATIVE_UCHAR");
- else if (H5Tequal(type, H5T_NATIVE_SHORT))
- printf( "H5T_NATIVE_SHORT");
- else if (H5Tequal(type, H5T_NATIVE_USHORT))
- printf( "H5T_NATIVE_USHORT");
- else if (H5Tequal(type, H5T_NATIVE_INT))
- printf( "H5T_NATIVE_INT");
- else if (H5Tequal(type, H5T_NATIVE_UINT))
- printf( "H5T_NATIVE_UINT");
- else if (H5Tequal(type, H5T_NATIVE_LONG))
- printf( "H5T_NATIVE_LONG");
- else if (H5Tequal(type, H5T_NATIVE_ULONG))
- printf( "H5T_NATIVE_ULONG");
- else if (H5Tequal(type, H5T_NATIVE_LLONG))
- printf( "H5T_NATIVE_LLONG");
- else if (H5Tequal(type, H5T_NATIVE_ULLONG))
- printf( "H5T_NATIVE_ULLONG");
- else {
+ if (H5Tequal(type, H5T_STD_I8BE)) {
+ printf("H5T_STD_I8BE");
+ } else if (H5Tequal(type, H5T_STD_I8LE)) {
+ printf("H5T_STD_I8LE");
+ } else if (H5Tequal(type, H5T_STD_I16BE)) {
+ printf("H5T_STD_I16BE");
+ } else if (H5Tequal(type, H5T_STD_I16LE)) {
+ printf("H5T_STD_I16LE");
+ } else if (H5Tequal(type, H5T_STD_I32BE)) {
+ printf("H5T_STD_I32BE");
+ } else if (H5Tequal(type, H5T_STD_I32LE)) {
+ printf("H5T_STD_I32LE");
+ } else if (H5Tequal(type, H5T_STD_I64BE)) {
+ printf("H5T_STD_I64BE");
+ } else if (H5Tequal(type, H5T_STD_I64LE)) {
+ printf("H5T_STD_I64LE");
+ } else if (H5Tequal(type, H5T_STD_U8BE)) {
+ printf("H5T_STD_U8BE");
+ } else if (H5Tequal(type, H5T_STD_U8LE)) {
+ printf("H5T_STD_U8LE");
+ } else if (H5Tequal(type, H5T_STD_U16BE)) {
+ printf("H5T_STD_U16BE");
+ } else if (H5Tequal(type, H5T_STD_U16LE)) {
+ printf("H5T_STD_U16LE");
+ } else if (H5Tequal(type, H5T_STD_U32BE)) {
+ printf("H5T_STD_U32BE");
+ } else if (H5Tequal(type, H5T_STD_U32LE)) {
+ printf("H5T_STD_U32LE");
+ } else if (H5Tequal(type, H5T_STD_U64BE)) {
+ printf("H5T_STD_U64BE");
+ } else if (H5Tequal(type, H5T_STD_U64LE)) {
+ printf("H5T_STD_U64LE");
+ } else if (H5Tequal(type, H5T_NATIVE_SCHAR)) {
+ printf("H5T_NATIVE_SCHAR");
+ } else if (H5Tequal(type, H5T_NATIVE_UCHAR)) {
+ printf("H5T_NATIVE_UCHAR");
+ } else if (H5Tequal(type, H5T_NATIVE_SHORT)) {
+ printf("H5T_NATIVE_SHORT");
+ } else if (H5Tequal(type, H5T_NATIVE_USHORT)) {
+ printf("H5T_NATIVE_USHORT");
+ } else if (H5Tequal(type, H5T_NATIVE_INT)) {
+ printf("H5T_NATIVE_INT");
+ } else if (H5Tequal(type, H5T_NATIVE_UINT)) {
+ printf("H5T_NATIVE_UINT");
+ } else if (H5Tequal(type, H5T_NATIVE_LONG)) {
+ printf("H5T_NATIVE_LONG");
+ } else if (H5Tequal(type, H5T_NATIVE_ULONG)) {
+ printf("H5T_NATIVE_ULONG");
+ } else if (H5Tequal(type, H5T_NATIVE_LLONG)) {
+ printf("H5T_NATIVE_LLONG");
+ } else if (H5Tequal(type, H5T_NATIVE_ULLONG)) {
+ printf("H5T_NATIVE_ULLONG");
+ } else {
printf( "undefined integer");
d_status = 1;
}
break;
case H5T_FLOAT:
- if (H5Tequal(type, H5T_IEEE_F32BE))
- printf( "H5T_IEEE_F32BE");
- else if (H5Tequal(type, H5T_IEEE_F32LE))
- printf( "H5T_IEEE_F32LE");
- else if (H5Tequal(type, H5T_IEEE_F64BE))
- printf( "H5T_IEEE_F64BE");
- else if (H5Tequal(type, H5T_IEEE_F64LE))
- printf( "H5T_IEEE_F64LE");
- else if (H5Tequal(type, H5T_NATIVE_FLOAT))
- printf( "H5T_NATIVE_FLOAT");
- else if (H5Tequal(type, H5T_NATIVE_DOUBLE))
- printf( "H5T_NATIVE_DOUBLE");
- else if (H5Tequal(type, H5T_NATIVE_LDOUBLE))
- printf( "H5T_NATIVE_LDOUBLE");
- else {
- printf( "undefined float");
+ if (H5Tequal(type, H5T_IEEE_F32BE)) {
+ printf("H5T_IEEE_F32BE");
+ } else if (H5Tequal(type, H5T_IEEE_F32LE)) {
+ printf("H5T_IEEE_F32LE");
+ } else if (H5Tequal(type, H5T_IEEE_F64BE)) {
+ printf("H5T_IEEE_F64BE");
+ } else if (H5Tequal(type, H5T_IEEE_F64LE)) {
+ printf("H5T_IEEE_F64LE");
+ } else if (H5Tequal(type, H5T_NATIVE_FLOAT)) {
+ printf("H5T_NATIVE_FLOAT");
+ } else if (H5Tequal(type, H5T_NATIVE_DOUBLE)) {
+ printf("H5T_NATIVE_DOUBLE");
+ } else if (H5Tequal(type, H5T_NATIVE_LDOUBLE)) {
+ printf("H5T_NATIVE_LDOUBLE");
+ } else {
+ printf("undefined float");
d_status = 1;
}
break;
case H5T_TIME:
- printf( "H5T_TIME: not yet implemented");
+ printf("H5T_TIME: not yet implemented");
break;
case H5T_STRING:
-
size = H5Tget_size(type);
- str_pad = H5Tget_strpad(type) ;
+ str_pad = H5Tget_strpad(type);
cset = H5Tget_cset(type);
- indentation (indent+COL);
+ indentation (indent + COL);
printf("%s %s %d;\n", dump_header_format->strblockbegin, STRSIZE, (int)size);
-
- indentation (indent+COL);
+ indentation(indent + COL);
printf(" %s ", STRPAD);
- if (str_pad == H5T_STR_NULLTERM )
+ if (str_pad == H5T_STR_NULLTERM )
printf("H5T_STR_NULLTERM;\n");
-
else if (str_pad == H5T_STR_NULLPAD )
-
printf("H5T_STR_NULLPAD;\n");
-
else if (str_pad == H5T_STR_SPACEPAD )
-
printf("H5T_STR_SPACEPAD;\n");
-
else
printf("H5T_STR_ERROR;\n");
- indentation (indent+COL);
+ indentation(indent + COL);
printf(" %s ", CSET);
+
if (cset == H5T_CSET_ASCII)
printf("H5T_CSET_ASCII;\n");
else
printf("unknown_cset;\n");
str_type = H5Tcopy(H5T_C_S1);
- H5Tset_cset(str_type, cset ) ;
+ H5Tset_cset(str_type, cset);
H5Tset_size(str_type, size);
H5Tset_strpad(str_type, str_pad);
-
- indentation (indent+COL);
+ indentation(indent + COL);
printf(" %s ", CTYPE);
+
if (H5Tequal(type,str_type)) {
printf("H5T_C_S1;\n");
H5Tclose(str_type);
} else {
+ H5Tclose(str_type);
+ str_type = H5Tcopy(H5T_FORTRAN_S1);
+ H5Tset_cset(str_type, cset ) ;
+ H5Tset_size(str_type, size);
+ H5Tset_strpad(str_type, str_pad );
+
+ if (H5Tequal(type,str_type)) {
+ printf( "H5T_FORTRAN_S1;\n");
+ } else {
+ printf("unknown_one_character_type;\n ");
+ d_status = 1;
+ }
- H5Tclose(str_type);
- str_type = H5Tcopy(H5T_FORTRAN_S1);
- H5Tset_cset(str_type, cset ) ;
- H5Tset_size(str_type, size);
- H5Tset_strpad(str_type, str_pad );
- if (H5Tequal(type,str_type))
- printf( "H5T_FORTRAN_S1;\n");
- else {
- printf("unknown_one_character_type;\n ");
- d_status = 1;
- }
- H5Tclose(str_type);
+ H5Tclose(str_type);
}
- indentation (indent+COL);
- printf("%s", dump_header_format->strblockend);
+ indentation(indent + COL);
+ printf("%s", dump_header_format->strblockend);
break;
case H5T_BITFIELD:
-
- if (H5Tequal(type, H5T_STD_B8BE))
+ if (H5Tequal(type, H5T_STD_B8BE)) {
printf( "H5T_STD_B8BE");
- else if (H5Tequal(type, H5T_STD_B8LE))
+ } else if (H5Tequal(type, H5T_STD_B8LE)) {
printf( "H5T_STD_B8LE");
- else if (H5Tequal(type, H5T_STD_B16BE))
+ } else if (H5Tequal(type, H5T_STD_B16BE)) {
printf( "H5T_STD_B16BE");
- else if (H5Tequal(type, H5T_STD_B16LE))
+ } else if (H5Tequal(type, H5T_STD_B16LE)) {
printf( "H5T_STD_B16LE");
- else if (H5Tequal(type, H5T_STD_B32BE))
+ } else if (H5Tequal(type, H5T_STD_B32BE)) {
printf( "H5T_STD_B32BE");
- else if (H5Tequal(type, H5T_STD_B32LE))
+ } else if (H5Tequal(type, H5T_STD_B32LE)) {
printf( "H5T_STD_B32LE");
- else if (H5Tequal(type, H5T_STD_B64BE))
+ } else if (H5Tequal(type, H5T_STD_B64BE)) {
printf( "H5T_STD_B64BE");
- else if (H5Tequal(type, H5T_STD_B64LE))
+ } else if (H5Tequal(type, H5T_STD_B64LE)) {
printf( "H5T_STD_B64LE");
- else {
+ } else {
printf( "undefined bitfield");
d_status = 1;
}
@@ -439,17 +432,16 @@ H5G_stat_t statbuf;
break;
case H5T_COMPOUND:
-
if (H5Tcommitted(type) > 0) {
H5Gget_objinfo(type, ".", TRUE, &statbuf);
-
i = search_obj (type_table, statbuf.objno);
+ indentation(indent + COL);
- indentation (indent+COL);
if (i >= 0) {
if (!type_table->objs[i].recorded)
- printf("\"/#%lu:%lu\"\n", type_table->objs[i].objno[0],
- type_table->objs[i].objno[1]);
+ printf("\"/#%lu:%lu\"\n",
+ type_table->objs[i].objno[0],
+ type_table->objs[i].objno[1]);
else
printf("\"%s\"\n", type_table->objs[i].objname);
} else {
@@ -458,45 +450,46 @@ H5G_stat_t statbuf;
}
} else {
-
nmembers = H5Tget_nmembers(type);
for (i = 0; i < nmembers; i++) {
fname = H5Tget_member_name(type, i);
-
mtype = H5Tget_member_type(type, i);
-
ndims = H5Tget_member_dims(type, i, dims, perm);
- if (H5Tget_class(mtype) != H5T_STRING)/* && (H5Tget_class(mtype) != H5T_COMPOUND))*/
- indentation (indent+COL);
+ if (H5Tget_class(mtype) != H5T_STRING)
+ /* && (H5Tget_class(mtype) != H5T_COMPOUND))*/
+ indentation (indent + COL);
+
if (H5Tget_class(mtype) == H5T_COMPOUND) {
indent += COL;
printf("{\n");
}
+
print_datatype(mtype);
+
if (H5Tget_class(mtype) == H5T_COMPOUND) {
indent -= COL;
indentation (indent+COL);
printf("}");
}
+
printf (" \"%s\"", fname);
- if (ndims != 1 || dims[0] != 1) {
+ if (ndims != 1 || dims[0] != 1)
for (j = 0; j < ndims; j++)
printf("[%d]",(int)dims[j]);
- }
-
- printf (";\n");
- free (fname);
+ printf(";\n");
+ free(fname);
}
}
-
break;
+
case H5T_REFERENCE:
printf("H5T_REFERENCE");
break;
+
case H5T_ENUM:
printf("H5T_ENUM\n");
indentation(indent + COL);
@@ -506,18 +499,17 @@ H5G_stat_t statbuf;
printf(";");
print_enum(type);
printf("\n");
- indentation (indent + COL);
+ indentation(indent + COL);
printf("%s", dump_header_format->enumblockend);
break;
+
default:
printf( "unknown data type");
d_status = 1;
break;
}
-
}
-
/*-------------------------------------------------------------------------
* Function: dump_bb
*
@@ -531,13 +523,11 @@ H5G_stat_t statbuf;
*
*-----------------------------------------------------------------------*/
static void
-dump_bb(void) {
-
- printf ("%s %s boot block not yet implemented %s\n", BOOT_BLOCK, BEGIN, END);
-
+dump_bb(void)
+{
+ printf("%s %s boot block not yet implemented %s\n", BOOT_BLOCK, BEGIN, END);
}
-
/*-------------------------------------------------------------------------
* Function: dump_datatype
*
@@ -552,31 +542,37 @@ dump_bb(void) {
*
*-----------------------------------------------------------------------*/
static void
-dump_datatype (hid_t type) {
-
+dump_datatype(hid_t type)
+{
indent += COL;
- indentation (indent);
+ indentation(indent);
+
if (H5Tget_class(type) == H5T_COMPOUND) {
- printf ("%s %s\n", dump_header_format->datatypebegin , dump_header_format->datatypeblockbegin);
+ printf("%s %s\n", dump_header_format->datatypebegin,
+ dump_header_format->datatypeblockbegin);
print_datatype(type);
- indentation (indent);
- printf ("%s %s\n", dump_header_format->datatypeblockend, dump_header_format->datatypeend);
-
+ indentation(indent);
+ printf("%s %s\n", dump_header_format->datatypeblockend,
+ dump_header_format->datatypeend);
} else if (H5Tget_class(type) == H5T_STRING) {
- printf ("%s %s\n", dump_header_format->datatypebegin, dump_header_format->datatypeblockbegin);
+ printf("%s %s\n", dump_header_format->datatypebegin,
+ dump_header_format->datatypeblockbegin);
print_datatype(type);
printf("\n");
- indentation (indent);
- printf ("%s %s\n", dump_header_format->datatypeblockend, dump_header_format->datatypeend);
+ indentation(indent);
+ printf("%s %s\n", dump_header_format->datatypeblockend,
+ dump_header_format->datatypeend);
} else {
- printf ("%s %s ", dump_header_format->datatypebegin, dump_header_format->datatypeblockbegin);
+ printf("%s %s ", dump_header_format->datatypebegin,
+ dump_header_format->datatypeblockbegin);
print_datatype(type);
- printf (" %s %s\n", dump_header_format->datatypeblockend, dump_header_format->datatypeend);
+ printf(" %s %s\n", dump_header_format->datatypeblockend,
+ dump_header_format->datatypeend);
}
+
indent -= COL;
}
-
/*-------------------------------------------------------------------------
* Function: dump_dataspace
*
@@ -591,50 +587,56 @@ dump_datatype (hid_t type) {
*
*-----------------------------------------------------------------------*/
static void
-dump_dataspace (hid_t space)
+dump_dataspace(hid_t space)
{
hsize_t size[H5DUMP_MAX_RANK];
hsize_t maxsize[H5DUMP_MAX_RANK];
int ndims = H5Sget_simple_extent_dims(space, size, maxsize);
int i;
- indentation (indent+COL);
-
+ indentation(indent + COL);
printf("%s ", dump_header_format->dataspacebegin);
if (H5Sis_simple(space)) {
+ if (ndims == 0) {
+ /* scalar dataspace */
+ HDfprintf(stdout, "%s %s ",
+ dump_header_format->dataspacedescriptionbegin,
+ SCALAR);
+ } else {
+ /* simple dataspace */
+ HDfprintf(stdout, "%s %s %s %Hu",
+ dump_header_format->dataspacedescriptionbegin, SIMPLE,
+ dump_header_format->dataspacedimbegin,size[0]);
- if (ndims == 0) /* scalar dataspace */
- HDfprintf (stdout, "%s %s ", dump_header_format->dataspacedescriptionbegin, SCALAR);
- else { /* simple dataspace */
- HDfprintf (stdout, "%s %s %s %Hu",dump_header_format->dataspacedescriptionbegin, SIMPLE,
- dump_header_format->dataspacedimbegin,size[0]);
for (i = 1; i < ndims; i++)
HDfprintf (stdout, ", %Hu", size[i]);
- printf(" %s / ",dump_header_format->dataspacedimend);
+
+ printf(" %s / ", dump_header_format->dataspacedimend);
if (maxsize[0]==H5S_UNLIMITED)
- HDfprintf (stdout, "%s %s", dump_header_format->dataspacedimbegin,"H5S_UNLIMITED");
+ HDfprintf(stdout, "%s %s",
+ dump_header_format->dataspacedimbegin,
+ "H5S_UNLIMITED");
else
- HDfprintf (stdout, "%s %Hu", dump_header_format->dataspacedimbegin,maxsize[0]);
+ HDfprintf(stdout, "%s %Hu",
+ dump_header_format->dataspacedimbegin, maxsize[0]);
for (i = 1; i < ndims; i++)
- if (maxsize[i]==H5S_UNLIMITED)
- HDfprintf (stdout, ", %s", "H5S_UNLIMITED");
+ if (maxsize[i] == H5S_UNLIMITED)
+ HDfprintf(stdout, ", %s", "H5S_UNLIMITED");
else
- HDfprintf (stdout, ", %Hu", maxsize[i]);
+ HDfprintf(stdout, ", %Hu", maxsize[i]);
printf(" %s ", dump_header_format->dataspacedimend);
}
-
- } else
+ } else {
printf("%s not yet implemented %s\n", BEGIN, END);
+ }
end_obj(dump_header_format->dataspaceend, dump_header_format->dataspaceblockend);
-
}
-
/*-------------------------------------------------------------------------
* Function: dump_attr
*
@@ -650,41 +652,42 @@ dump_dataspace (hid_t space)
*
*-----------------------------------------------------------------------*/
static herr_t
-dump_attr (hid_t attr, const char *attr_name, void UNUSED *op_data)
+dump_attr(hid_t attr, const char *attr_name, void UNUSED *op_data)
{
-hid_t attr_id, type, space;
+ hid_t attr_id, type, space;
indentation(indent);
- begin_obj (dump_header_format->attributebegin, attr_name, dump_header_format->attributeblockbegin);
+ begin_obj(dump_header_format->attributebegin, attr_name,
+ dump_header_format->attributeblockbegin);
if ((attr_id = H5Aopen_name (attr, attr_name))>= 0) {
-
type = H5Aget_type(attr_id);
space = H5Aget_space(attr_id);
dump_datatype(type);
dump_dataspace(space);
- if (display_oid){
+
+ if (display_oid)
dump_oid(attr_id);
- }
- if (display_data) dump_data(attr_id, ATTRIBUTE_DATA);
+
+ if (display_data)
+ dump_data(attr_id, ATTRIBUTE_DATA);
+
H5Tclose(type);
H5Sclose(space);
H5Aclose (attr_id);
indentation (indent);
- end_obj(dump_header_format->attributeend,dump_header_format->attributeblockend );
-
+ end_obj(dump_header_format->attributeend,
+ dump_header_format->attributeblockend);
+ return SUCCEED;
} else {
- indentation (indent+COL);
+ indentation(indent + COL);
printf("h5dump error: unable to open attribute.\n");
- indentation (indent);
- end_obj(dump_header_format->attributeend,dump_header_format->attributeblockend);
+ indentation(indent);
+ end_obj(dump_header_format->attributeend,
+ dump_header_format->attributeblockend);
d_status = 1;
return FAIL;
}
-
-
- return SUCCEED;
-
}
/*-------------------------------------------------------------------------
@@ -702,93 +705,105 @@ hid_t attr_id, type, space;
*
*-----------------------------------------------------------------------*/
static herr_t
-dump_selected_attr (hid_t loc_id, char *name)
+dump_selected_attr(hid_t loc_id, char *name)
{
-int j;
-char *obj_name, *attr_name;
-hid_t oid, attr_id, type, space;
-H5G_stat_t statbuf;
+ int j;
+ char *obj_name, *attr_name;
+ hid_t oid, attr_id, type, space;
+ H5G_stat_t statbuf;
- j = (int)strlen(name)-1;
- obj_name = malloc ((j+2)* sizeof(char));
+ j = (int)strlen(name) - 1;
+ obj_name = malloc(j + 2);
/* find the last / */
- while (name[j] != '/' && j >=0) j--;
+ while (name[j] != '/' && j >=0)
+ j--;
/* object name */
- if (j == -1) strcpy(obj_name, "/");
- else {
- strncpy(obj_name, name, j+1);
- obj_name[j+1] = '\0';
+ if (j == -1) {
+ strcpy(obj_name, "/");
+ } else {
+ strncpy(obj_name, name, j+1);
+ obj_name[j+1] = '\0';
}
- attr_name = name+j+1;
- begin_obj (dump_header_format->attributebegin, name, dump_header_format->attributeblockbegin);
-
+ attr_name = name + j + 1;
+ begin_obj(dump_header_format->attributebegin, name,
+ dump_header_format->attributeblockbegin);
H5Gget_objinfo(loc_id, obj_name, FALSE , &statbuf);
+
switch (statbuf.type) {
case H5G_GROUP:
- if ((oid = H5Gopen (loc_id, obj_name))<0) {
- indentation (COL);
- fprintf (stdout, "h5dump error: unable to open %s\n", obj_name);
- end_obj(dump_header_format->attributeend, dump_header_format->attributeblockend);
+ if ((oid = H5Gopen(loc_id, obj_name))<0) {
+ indentation(COL);
+ fprintf(stdout, "h5dump error: unable to open %s\n", obj_name);
+ end_obj(dump_header_format->attributeend,
+ dump_header_format->attributeblockend);
d_status = 1;
return FAIL;
}
break;
+
case H5G_DATASET:
- if ((oid = H5Dopen (loc_id, obj_name))<0) {
- indentation (COL);
- fprintf (stdout, "h5dump error: unable to open %s\n", obj_name);
- end_obj(dump_header_format->attributeend, dump_header_format->attributeblockend);
+ if ((oid = H5Dopen(loc_id, obj_name))<0) {
+ indentation(COL);
+ fprintf(stdout, "h5dump error: unable to open %s\n", obj_name);
+ end_obj(dump_header_format->attributeend,
+ dump_header_format->attributeblockend);
d_status = 1;
return FAIL;
}
break;
+
case H5G_TYPE:
if ((oid = H5Topen(loc_id, obj_name)) < 0 ) {
- indentation (COL);
- fprintf (stdout, "h5dump error: unable to open %s\n", obj_name);
- end_obj(dump_header_format->attributeend, dump_header_format->attributeblockend);
+ indentation(COL);
+ fprintf(stdout, "h5dump error: unable to open %s\n", obj_name);
+ end_obj(dump_header_format->attributeend,
+ dump_header_format->attributeblockend);
d_status = 1;
return FAIL;
- }
+ }
break;
default:
- indentation (COL);
- fprintf (stdout, "h5dump error: unable to open %s\n", obj_name);
- end_obj(dump_header_format->attributeend, dump_header_format->attributeblockend);
+ indentation(COL);
+ fprintf(stdout, "h5dump error: unable to open %s\n", obj_name);
+ end_obj(dump_header_format->attributeend,
+ dump_header_format->attributeblockend);
d_status = 1;
return FAIL;
}
if ((attr_id = H5Aopen_name (oid, attr_name))>= 0) {
-
type = H5Aget_type(attr_id);
space = H5Aget_space(attr_id);
dump_datatype(type);
dump_dataspace(space);
- if (display_oid){
+
+ if (display_oid)
dump_oid(attr_id);
- }
- if (display_data) dump_data(attr_id, ATTRIBUTE_DATA);
+
+ if (display_data)
+ dump_data(attr_id, ATTRIBUTE_DATA);
+
H5Tclose(type);
H5Sclose(space);
H5Aclose (attr_id);
- end_obj(dump_header_format->attributeend, dump_header_format->attributeblockend);
-
+ end_obj(dump_header_format->attributeend,
+ dump_header_format->attributeblockend);
} else {
- indentation (COL);
+ indentation(COL);
printf("h5dump error: unable to open attribute.\n");
- end_obj(dump_header_format->attributeend, dump_header_format->attributeblockend);
+ end_obj(dump_header_format->attributeend,
+ dump_header_format->attributeblockend);
d_status = 1;
}
switch (statbuf.type) {
case H5G_GROUP:
if (H5Gclose (oid) < 0) {
- d_status = 1;
- return FAIL;
+ d_status = 1;
+ return FAIL;
}
break;
@@ -814,7 +829,6 @@ H5G_stat_t statbuf;
return SUCCEED;
}
-
/*-------------------------------------------------------------------------
* Function: dump all
*
@@ -830,117 +844,119 @@ H5G_stat_t statbuf;
*
*-----------------------------------------------------------------------*/
static herr_t
-dump_all (hid_t group, const char *name, void UNUSED *op_data)
+dump_all(hid_t group, const char *name, void UNUSED *op_data)
{
-hid_t obj;
-char *buf, *tmp;
-H5G_stat_t statbuf;
-int i;
-
+ hid_t obj;
+ char *buf, *tmp;
+ H5G_stat_t statbuf;
+ int i;
H5Gget_objinfo(group, name, FALSE, &statbuf);
-
- tmp = (char *) malloc ((strlen(prefix)+strlen(name)+2) * sizeof(char));
+ tmp = (char *)malloc(strlen(prefix) + strlen(name) + 2);
strcpy(tmp, prefix);
switch (statbuf.type) {
case H5G_LINK:
- indentation (indent);
-
- buf = malloc (statbuf.linklen*sizeof(char));
-
- begin_obj(dump_header_format->softlinkbegin, name, dump_header_format->softlinkblockbegin);
- indentation (indent+COL);
- if (H5Gget_linkval (group, name, statbuf.linklen, buf)>=0)
- printf ("LINKTARGET \"%s\"\n", buf);
- else {
- printf ("h5dump error: unable to get link value.\n");
+ indentation(indent);
+ buf = malloc(statbuf.linklen);
+ begin_obj(dump_header_format->softlinkbegin, name,
+ dump_header_format->softlinkblockbegin);
+ indentation(indent + COL);
+
+ if (H5Gget_linkval(group, name, statbuf.linklen, buf) >= 0) {
+ printf("LINKTARGET \"%s\"\n", buf);
+ } else {
+ printf("h5dump error: unable to get link value.\n");
d_status = 1;
}
- indentation (indent);
- end_obj(dump_header_format->softlinkend, dump_header_format->softlinkblockend);
- free (buf);
+ indentation(indent);
+ end_obj(dump_header_format->softlinkend,
+ dump_header_format->softlinkblockend);
+ free(buf);
break;
case H5G_GROUP:
- if ((obj=H5Gopen (group, name))>=0) {
- strcat(strcat(prefix,"/"), name);
- dump_group (obj, name);
+ if ((obj = H5Gopen (group, name)) >= 0) {
+ strcat(strcat(prefix, "/"), name);
+ dump_group(obj, name);
strcpy(prefix, tmp);
H5Gclose (obj);
} else {
- printf ("h5dump error: unable to dump group %s\n",name);
+ printf("h5dump error: unable to dump group %s\n", name);
d_status = 1;
}
break;
case H5G_DATASET:
-
- if ((obj=H5Dopen (group, name))>=0) {
-
+ if ((obj=H5Dopen (group, name))>=0) {
/* hard link */
H5Gget_objinfo(obj, ".", TRUE, &statbuf);
+
if (statbuf.nlink > 1) {
i = search_obj (dset_table, statbuf.objno);
+
if (i < 0) {
- indentation (indent);
- begin_obj(dump_header_format->datasetbegin, name, dump_header_format->datasetblockbegin);
- indentation (indent+COL);
+ indentation(indent);
+ begin_obj(dump_header_format->datasetbegin, name,
+ dump_header_format->datasetblockbegin);
+ indentation(indent + COL);
printf("h5dump error: internal error\n");
- indentation (indent);
- end_obj(dump_header_format->datasetend, dump_header_format->datasetblockend);
+ indentation(indent);
+ end_obj(dump_header_format->datasetend,
+ dump_header_format->datasetblockend);
d_status = 1;
goto done;
} else if (dset_table->objs[i].displayed) {
- indentation (indent);
- begin_obj(dump_header_format->datasetbegin, name, dump_header_format->datasetblockbegin);
- indentation (indent+COL);
+ indentation(indent);
+ begin_obj(dump_header_format->datasetbegin, name,
+ dump_header_format->datasetblockbegin);
+ indentation(indent + COL);
printf("%s \"%s\"\n", HARDLINK, dset_table->objs[i].objname);
- indentation (indent);
- end_obj(dump_header_format->datasetend, dump_header_format->datasetblockend);
+ indentation(indent);
+ end_obj(dump_header_format->datasetend,
+ dump_header_format->datasetblockend);
goto done;
} else {
dset_table->objs[i].displayed = 1;
- strcat(tmp,"/");
- strcat(tmp,name);
+ strcat(tmp, "/");
+ strcat(tmp, name);
strcpy(dset_table->objs[i].objname, tmp);
}
}
- dump_dataset (obj, name);
- H5Dclose (obj);
+
+ dump_dataset(obj, name);
+ H5Dclose(obj);
} else {
- printf ("h5dump error: unable to dump dataset %s\n",name);
+ printf("h5dump error: unable to dump dataset %s\n",name);
d_status = 1;
}
break;
case H5G_TYPE:
- if ((obj=H5Topen (group, name)) >= 0) {
- dump_named_datatype (obj, name);
+ if ((obj = H5Topen(group, name)) >= 0) {
+ dump_named_datatype(obj, name);
H5Tclose(obj);
} else {
- printf ("h5dump error: unable to dump data type %s\n",name);
+ printf("h5dump error: unable to dump data type %s\n", name);
d_status = 1;
}
+
break;
default:
printf ("h5dump error: unknown object %s\n", name);
d_status = 1;
return FAIL;
-
}
done:
free(tmp);
return SUCCEED;
-
}
-
/*-------------------------------------------------------------------------
* Function: dump_named_datatype
*
@@ -954,40 +970,44 @@ done:
*
*-----------------------------------------------------------------------*/
static void
-dump_named_datatype (hid_t type, const char *name) {
+dump_named_datatype(hid_t type, const char *name)
+{
int nmembers = 1, x,j;
hid_t comptype;
char *compname;
int ndims, perm[H5DUMP_MAX_RANK];
-size_t dims[H5DUMP_MAX_RANK];
-
+ size_t dims[H5DUMP_MAX_RANK];
- indentation (indent);
- begin_obj(dump_header_format->datatypebegin, name, dump_header_format->datatypeblockbegin);
+ indentation(indent);
+ begin_obj(dump_header_format->datatypebegin, name,
+ dump_header_format->datatypeblockbegin);
- if (H5Tget_class(type) == H5T_COMPOUND){
+ if (H5Tget_class(type) == H5T_COMPOUND) {
nmembers = H5Tget_nmembers(type);
- for (x = 0; x < nmembers; x++){
+
+ for (x = 0; x < nmembers; x++) {
comptype = H5Tget_member_type(type,x);
compname = H5Tget_member_name(type,x);
ndims = H5Tget_member_dims(type, x, dims, perm);
- indentation (indent+COL);
+ indentation(indent + COL);
print_datatype(comptype);
- printf(" \"%s\"",compname);
- if (ndims != 1 || dims[0] != 1) {
+ printf(" \"%s\"", compname);
+
+ if (ndims != 1 || dims[0] != 1)
for (j = 0; j < ndims; j++)
printf("[%d]",(int)dims[j]);
- }
+
printf(";\n");
}
- }
- else {
- indentation (indent+COL);
+ } else {
+ indentation(indent + COL);
print_datatype(type);
printf(";\n");
}
- indentation (indent);
- end_obj(dump_header_format->datatypeend, dump_header_format->datatypeblockend);
+
+ indentation(indent);
+ end_obj(dump_header_format->datatypeend,
+ dump_header_format->datatypeblockend);
}
/*-------------------------------------------------------------------------
@@ -1003,75 +1023,67 @@ size_t dims[H5DUMP_MAX_RANK];
*
*-----------------------------------------------------------------------*/
static void
-dump_group (hid_t gid, const char *name) {
-H5G_stat_t statbuf;
-hid_t dset, type;
-char typename[1024], *tmp;
-int i;
+dump_group(hid_t gid, const char *name)
+{
+ H5G_stat_t statbuf;
+ hid_t dset, type;
+ char typename[1024], *tmp;
+ int i;
- tmp = (char *) malloc ((strlen(prefix)+strlen(name)+2) * sizeof(char));
+ tmp = malloc (strlen(prefix) + strlen(name) + 2);
strcpy(tmp, prefix);
-
-
- indentation (indent);
- begin_obj(dump_header_format->groupbegin, name, dump_header_format->groupblockbegin);
+ indentation(indent);
+ begin_obj(dump_header_format->groupbegin, name,
+ dump_header_format->groupblockbegin);
indent += COL;
- if (display_oid) {
+
+ if (display_oid)
dump_oid(gid);
- }
- if (!strcmp(name,"/") && unamedtype) { /* dump unamed type in root group */
+
+ if (!strcmp(name, "/") && unamedtype)
+ /* dump unamed type in root group */
for (i = 0; i < type_table->nobjs; i++)
if (!type_table->objs[i].recorded) {
- dset = H5Dopen (gid, type_table->objs[i].objname);
- type = H5Dget_type (dset);
- sprintf(typename,"#%lu:%lu", type_table->objs[i].objno[0],
- type_table->objs[i].objno[1]);
- dump_named_datatype (type, typename);
+ dset = H5Dopen(gid, type_table->objs[i].objname);
+ type = H5Dget_type(dset);
+ sprintf(typename,"#%lu:%lu",
+ type_table->objs[i].objno[0],
+ type_table->objs[i].objno[1]);
+ dump_named_datatype(type, typename);
H5Tclose(type);
H5Dclose(dset);
}
- }
H5Gget_objinfo(gid, ".", TRUE, &statbuf);
- if (statbuf.nlink > 1) {
+ if (statbuf.nlink > 1) {
i = search_obj (group_table, statbuf.objno);
- if (i < 0) {
- indentation (indent);
+ if (i < 0) {
+ indentation(indent);
printf("h5dump error: internal error\n");
d_status = 1;
-
} else if (group_table->objs[i].displayed) {
-
- indentation (indent);
+ indentation(indent);
printf("%s \"%s\"\n",HARDLINK, group_table->objs[i].objname);
-
} else {
-
strcpy(group_table->objs[i].objname, prefix);
group_table->objs[i].displayed = 1;
- H5Aiterate (gid, NULL, dump_attr, NULL);
- H5Giterate (gid, ".", NULL, dump_all, NULL);
-
+ H5Aiterate(gid, NULL, dump_attr, NULL);
+ H5Giterate(gid, ".", NULL, dump_all, NULL);
}
-
} else {
-
- H5Aiterate (gid, NULL, dump_attr, NULL);
- H5Giterate (gid, ".", NULL, dump_all, NULL);
-
+ H5Aiterate(gid, NULL, dump_attr, NULL);
+ H5Giterate(gid, ".", NULL, dump_all, NULL);
}
indent -= COL;
- indentation (indent);
- end_obj(dump_header_format->groupend, dump_header_format->groupblockend);
-
+ indentation(indent);
+ end_obj(dump_header_format->groupend,
+ dump_header_format->groupblockend);
free(tmp);
-
}
-
/*-------------------------------------------------------------------------
* Function: dump_dataset
*
@@ -1085,73 +1097,78 @@ int i;
*
*-----------------------------------------------------------------------*/
static void
-dump_dataset (hid_t did, const char *name) {
-hid_t type, space;
+dump_dataset(hid_t did, const char *name)
+{
+ hid_t type, space;
indentation (indent);
- begin_obj(dump_header_format->datasetbegin, name, dump_header_format->datasetblockbegin);
-
- type = H5Dget_type (did);
- space = H5Dget_space (did);
+ begin_obj(dump_header_format->datasetbegin, name,
+ dump_header_format->datasetblockbegin);
+ type = H5Dget_type(did);
+ space = H5Dget_space(did);
dump_datatype(type);
dump_dataspace(space);
- if (display_oid){
+
+ if (display_oid)
dump_oid(did);
- }
if (display_data)
- switch (H5Tget_class(type)) {
- case H5T_INTEGER:
- dump_data(did, DATASET_DATA);
- break;
- case H5T_FLOAT:
- dump_data(did, DATASET_DATA);
- break;
- case H5T_TIME:
- indent += COL;
- indentation (indent);
- indent -= COL;
- printf("DATA{ not yet implemented.}\n");
- break;
- case H5T_STRING:
- dump_data(did, DATASET_DATA);
- break;
- case H5T_BITFIELD:
- dump_data(did, DATASET_DATA);
- break;
- case H5T_OPAQUE:
- /* indent += COL;
- indentation (indent);
- indent -= COL;*/
- dump_data(did, DATASET_DATA);
- break;
- case H5T_COMPOUND:
- dump_data(did, DATASET_DATA);
- break;
- case H5T_REFERENCE:
- dump_data(did, DATASET_DATA);
- break;
- case H5T_ENUM:
- dump_data(did,DATASET_DATA);
- break;
-
- default: break;
- }
+ switch (H5Tget_class(type)) {
+ case H5T_INTEGER:
+ dump_data(did, DATASET_DATA);
+ break;
+
+ case H5T_FLOAT:
+ dump_data(did, DATASET_DATA);
+ break;
+
+ case H5T_TIME:
+ indent += COL;
+ indentation(indent);
+ indent -= COL;
+ printf("DATA{ not yet implemented.}\n");
+ break;
+
+ case H5T_STRING:
+ dump_data(did, DATASET_DATA);
+ break;
+
+ case H5T_BITFIELD:
+ dump_data(did, DATASET_DATA);
+ break;
+
+ case H5T_OPAQUE:
+ /* indent += COL;
+ indentation (indent);
+ indent -= COL;*/
+ dump_data(did, DATASET_DATA);
+ break;
+
+ case H5T_COMPOUND:
+ dump_data(did, DATASET_DATA);
+ break;
+
+ case H5T_REFERENCE:
+ dump_data(did, DATASET_DATA);
+ break;
+
+ case H5T_ENUM:
+ dump_data(did,DATASET_DATA);
+ break;
+
+ default:
+ break;
+ }
indent += COL;
- H5Aiterate (did, NULL, dump_attr, NULL);
+ H5Aiterate(did, NULL, dump_attr, NULL);
indent -= COL;
-
H5Tclose(type);
H5Sclose(space);
-
- indentation (indent);
+ indentation(indent);
end_obj(dump_header_format->datasetend, dump_header_format->datasetblockend);
-
}
-
-
#if H5DUMP_DEBUG
/*-------------------------------------------------------------------------
* Function: dump_tables
@@ -1165,12 +1182,13 @@ hid_t type, space;
* Modifications:
*
*-----------------------------------------------------------------------*/
-
static void
-dump_tables(void) {
-int i;
+dump_tables(void)
+{
+ int i;
printf("group_table: # of entries = %d\n", group_table->nobjs);
+
for ( i = 0; i < group_table->nobjs; i++)
printf ("%ul %ul %s %d %d\n", group_table->objs[i].objno[0],
group_table->objs[i].objno[1],
@@ -1179,6 +1197,7 @@ int i;
group_table->objs[i].recorded);
printf("\ndset_table: # of entries = %d\n", dset_table->nobjs);
+
for ( i = 0; i < dset_table->nobjs; i++)
printf ("%ul %ul %s %d %d\n", dset_table->objs[i].objno[0],
dset_table->objs[i].objno[1],
@@ -1187,6 +1206,7 @@ int i;
dset_table->objs[i].recorded);
printf("\ntype_table: # of entries = %d\n", type_table->nobjs);
+
for ( i = 0; i < type_table->nobjs; i++)
printf ("%ul %ul %s %d %d\n", type_table->objs[i].objno[0],
type_table->objs[i].objno[1],
@@ -1194,10 +1214,7 @@ int i;
type_table->objs[i].displayed,
type_table->objs[i].recorded);
}
-
-#endif
-
-
+#endif /* H5DUMP_DEBUG */
/*-------------------------------------------------------------------------
* Function: dump_data
@@ -1213,7 +1230,8 @@ int i;
*-----------------------------------------------------------------------
*/
static void
-dump_data (hid_t obj_id, int obj_data) {
+dump_data(hid_t obj_id, int obj_data)
+{
h5dump_t *outputformat = &dataformat;
int d_status = -1;
void *buf;
@@ -1228,68 +1246,74 @@ dump_data (hid_t obj_id, int obj_data) {
outputformat->line_ncols = nCols;
indent += COL;
- /*the depth will tell us how far we need to indent extra. we use to just
- use indent but with the merging of the tools lib we have to do something different
- for the lib funtions... the normal indentation is 6 so when we dont need any extra
- indentation, depth will be 0.*/
-depth = indent/stdindent+1;
- indentation (indent);
- /* printf("%s %s\n", dump_header_format->databegin, BEGIN);*/
+
+ /*
+ * the depth will tell us how far we need to indent extra. we use to just
+ * use indent but with the merging of the tools lib we have to do
+ * something different for the lib funtions... the normal indentation is 6
+ * so when we don't need any extra indentation, depth will be 0.
+ */
+ depth = indent / stdindent + 1;
+ indentation(indent);
+ /*printf("%s %s\n", dump_header_format->databegin, BEGIN);*/
begin_obj(dump_header_format->databegin, NULL, dump_header_format->datablockbegin);
/* Print all the values. */
- if (obj_data == DATASET_DATA){
+ if (obj_data == DATASET_DATA) {
d_status = h5dump_dset(stdout, outputformat, obj_id, -1,depth);
- }
- else { /* need to call h5dump_mem for the attribute data */
-
+ } else {
+ /* need to call h5dump_mem for the attribute data */
type = H5Aget_type(obj_id);
- /* if (type < 0) {
+
+ /*
+ if (type < 0)
return (d_status);
- }*/
+ */
+
p_type = h5dump_fixtype(type);
H5Tclose(type);
- /* if (p_type < 0) return d_status;*/
+ /*
+ if (p_type < 0)
+ return d_status;
+ */
space = H5Aget_space(obj_id);
-/* if (space < 0) return d_status;
-*/
-
+ /*
+ if (space < 0)
+ return d_status;
+ */
ndims = H5Sget_simple_extent_dims(space, size, NULL);
- for (i=0; i<ndims; i++) {
- nelmts *= size[i];
- }
+ for (i = 0; i < ndims; i++)
+ nelmts *= size[i];
buf = malloc(nelmts * MAX(H5Tget_size(type), H5Tget_size(p_type)));
assert(buf);
- if (H5Aread(obj_id, p_type, buf)>=0) {
+
+ if (H5Aread(obj_id, p_type, buf) >= 0)
d_status = h5dump_mem(stdout, outputformat, p_type, space, buf, depth);
- }
+
free(buf);
H5Tclose(p_type);
H5Sclose(space);
H5Tclose(type);
}
-
if (d_status < 0) {
indentation(indent+COL);
printf("Unable to print data.\n");
d_status = 1;
}
+
indentation(indent);
- /* printf("%s\n", END);*/
+ /*printf("%s\n", END);*/
end_obj(dump_header_format->dataend, dump_header_format->datablockend);
indent -= COL;
}
-
-
-
/*-------------------------------------------------------------------------
* Function: main
*
@@ -1307,7 +1331,6 @@ int
main(int argc, char *argv[])
{
hid_t fid, gid, dsetid, typeid;
-
char *fname = NULL;
int i, index, curr_arg, display_bb=0, display_all=1, newwidth= 0;
int nopts=0, *opts;
@@ -1317,77 +1340,66 @@ main(int argc, char *argv[])
hid_t (*func)(void*);
find_objs_t *info = malloc(sizeof(find_objs_t));
+ if (argc < 2) {
+ usage();
+ exit(1);
+ }
dump_header_format = &standardformat;
/* Disable error reporting */
- H5Eget_auto (&func, &edata);
- H5Eset_auto (NULL, NULL);
+ H5Eget_auto(&func, &edata);
+ H5Eset_auto(NULL, NULL);
- if (argc < 2 ) {
- usage();
- exit(1);
- }
-
- opts = malloc((argc/2) * sizeof (int));
+ opts = malloc((argc / 2) * sizeof(int));
opts[0] = -1;
+
/* parse command line options */
for (curr_arg = 1; curr_arg < argc; curr_arg++)
+ if (argv[curr_arg][0] == '-') {
+ opts[nopts++] = curr_arg;
- if (argv[curr_arg][0] == '-') {
-
- opts[nopts++] = curr_arg;
-
- if (!strcmp(argv[curr_arg],"-h")) {
- usage();
- free(opts);
- exit(0);
- }
- else if (!strcmp(argv[curr_arg],"-V")){
- print_version("h5dump");
+ if (!strcmp(argv[curr_arg],"-h")) {
+ usage();
free(opts);
exit(0);
- }
-
- else if (!strcmp(argv[curr_arg],"-bb"))
-
- display_bb = 1;
-
- else if (!strcmp(argv[curr_arg],"-header"))
-
- display_data=0;
-
- else if (!strcmp(argv[curr_arg],"-v"))
-
- display_oid = 1;
-
- else if (!strcmp(argv[curr_arg],"-w")){
- /*
- this way we know which arg was the -w
- we know it won't be 0 since curr_arg starts at 1
- */
- newwidth = curr_arg;
- }
- else if (!strcmp(argv[curr_arg], "-xml")){
- dump_header_format = &xmlformat;
- }
- else if (strcmp(argv[curr_arg],"-a") &&
+ } else if (!strcmp(argv[curr_arg],"-V")) {
+ print_version("h5dump");
+ free(opts);
+ exit(0);
+ } else if (!strcmp(argv[curr_arg],"-bb")) {
+ display_bb = 1;
+ } else if (!strcmp(argv[curr_arg],"-header")) {
+ display_data=0;
+ } else if (!strcmp(argv[curr_arg],"-v")) {
+ display_oid = 1;
+ } else if (!strcmp(argv[curr_arg],"-w")) {
+ /*
+ * this way we know which arg was the -w we know it won't be 0
+ * since curr_arg starts at 1
+ */
+ newwidth = curr_arg;
+ } else if (!strcmp(argv[curr_arg], "-xml")) {
+ dump_header_format = &xmlformat;
+ } else if (strcmp(argv[curr_arg],"-a") &&
strcmp(argv[curr_arg],"-d") &&
strcmp(argv[curr_arg],"-g") &&
strcmp(argv[curr_arg],"-l") &&
strcmp(argv[curr_arg],"-t")) {
-
- fprintf(stderr, "h5dump error: illegal option %s \n",
- argv[curr_arg]);
- usage();
- free(opts);
- exit(1);
- } else display_all = 0;
- }
+ fprintf(stderr, "h5dump error: illegal option %s \n",
+ argv[curr_arg]);
+ usage();
+ free(opts);
+ exit(1);
+ } else {
+ display_all = 0;
+ }
+ }
/* check names */
if (argc == 2) {
- if (opts[0] == 1) { /* argv[1] is an option */
+ if (opts[0] == 1) {
+ /* argv[1] is an option */
fprintf(stderr, "h5dump error: no <names> or no <file>\n");
usage();
free(opts);
@@ -1395,45 +1407,52 @@ main(int argc, char *argv[])
}
} else {
for (i = 0; i < nopts-1; i++) {
- if (opts[i+1]-opts[i] == 1) {
- if (strcmp(argv[opts[i]], "-bb") &&
+ if (opts[i + 1] - opts[i] == 1) {
+ if (strcmp(argv[opts[i]], "-bb") &&
strcmp(argv[opts[i]], "-header") &&
strcmp(argv[opts[i]], "-xml") &&
strcmp(argv[opts[i]], "-v")) {
- fprintf(stderr,"h5dump error: no <names> after option %s\n",
+ fprintf(stderr,
+ "h5dump error: no <names> after option %s\n",
argv[opts[i]]);
usage();
free(opts);
exit(1);
- }
- }
+ }
+ }
}
- if (argc - opts[nopts-1] == 1) {
- fprintf(stderr,"h5dump error: no <file>\n");
+
+ if (argc - opts[nopts - 1] == 1) {
+ fprintf(stderr,"h5dump error: no <file>\n");
usage();
free(opts);
exit(1);
- }
- if (argc - opts[nopts-1] == 2) {
+ }
+
+ if (argc - opts[nopts - 1] == 2) {
if (strcmp(argv[opts[i]], "-bb") &&
strcmp(argv[opts[i]], "-header") &&
strcmp(argv[opts[i]], "-xml") &&
strcmp(argv[opts[i]], "-v")) {
- fprintf (stderr, "h5dump error: no <file> or no <names> or no <number> after option %s\n", argv[opts[i]]);
+ fprintf(stderr,
+ "h5dump error: no <file> or no <names> "
+ "or no <number> after option %s\n", argv[opts[i]]);
usage();
free(opts);
exit(1);
}
}
- }
-
+ }
- if (argv[argc-1][0] == '\\') fname = &argv[argc-1][1];
- else fname = argv[argc-1];
+ if (argv[argc - 1][0] == '\\')
+ fname = &argv[argc - 1][1];
+ else
+ fname = argv[argc - 1];
fid = h5dump_fopen(fname, NULL, 0);
+
if (fid < 0) {
- fprintf (stderr, "h5dump error: unable to open file %s \n", fname);
+ fprintf(stderr, "h5dump error: unable to open file %s \n", fname);
free(opts);
exit(1);
}
@@ -1444,31 +1463,28 @@ main(int argc, char *argv[])
init_table(&dset_table);
init_prefix(&prefix, prefix_len);
- /*init the find_objs_t*/
+ /* init the find_objs_t */
info->threshold = 0;
info->prefix_len = 1024;
- info->prefix = malloc(sizeof(char)*info->prefix_len);
- *(info->prefix) = '\0';
+ info->prefix = malloc(info->prefix_len);
+ info->prefix[0] = '\0';
info->group_table = group_table;
info->type_table = type_table;
info->dset_table = dset_table;
info->status = d_status;
-
-
/* find all shared objects */
- H5Giterate (fid, "/", NULL, find_objs, (void*)info);
+ H5Giterate(fid, "/", NULL, find_objs, (void*)info);
strcpy(prefix, "");
/* does there exist unamed committed data type */
for ( i = 0; i < type_table->nobjs; i++)
- if (type_table->objs[i].recorded == 0) unamedtype = 1;
-
-
- #ifdef H5DUMP_DEBUG
- dump_tables();
- #endif
+ if (type_table->objs[i].recorded == 0)
+ unamedtype = 1;
+#ifdef H5DUMP_DEBUG
+ dump_tables();
+#endif
if (info->status) {
printf("internal error! \n");
@@ -1476,200 +1492,217 @@ main(int argc, char *argv[])
}
/* start to dump */
- begin_obj(dump_header_format->filebegin, fname, dump_header_format->fileblockbegin);
-
+ begin_obj(dump_header_format->filebegin, fname,
+ dump_header_format->fileblockbegin);
- if (display_bb) dump_bb();
+ if (display_bb)
+ dump_bb();
- if (newwidth) {
+ if (newwidth)
sscanf(argv[newwidth + 1], "%d", &nCols);
- }
if (display_all) {
-
if ((gid = H5Gopen (fid, "/")) < 0 ) {
- fprintf(stdout, "h5dump error: unable to open root group\n");
- d_status = 1;
- } else
- dump_group(gid, "/");
+ fprintf(stdout, "h5dump error: unable to open root group\n");
+ d_status = 1;
+ } else {
+ dump_group(gid, "/");
+ }
if (H5Gclose (gid) < 0) {
fprintf(stdout, "h5dump error: unable to close root group\n");
d_status = 1;
}
-
- } else
-
- for (i = 0; i < nopts; i++) {
- if (!strcmp(argv[opts[i]],"-a")) {
-
- for (curr_arg = opts[i]+1;
- curr_arg < ((i+1)==nopts?(argc-1):opts[i+1]);
- curr_arg++)
+ } else {
+ for (i = 0; i < nopts; i++) {
+ if (!strcmp(argv[opts[i]],"-a")) {
+ for (curr_arg = opts[i] + 1;
+ curr_arg < ((i + 1) == nopts ? (argc - 1) : opts[i + 1]);
+ curr_arg++)
dump_selected_attr (fid, argv[curr_arg]);
-
- } else if (!strcmp(argv[opts[i]],"-d")) {
- for (curr_arg = opts[i]+1;
- curr_arg < ((i+1)==nopts?(argc-1):opts[i+1]);
+ } else if (!strcmp(argv[opts[i]],"-d")) {
+ for (curr_arg = opts[i] + 1;
+ curr_arg < ((i + 1) == nopts ? (argc - 1) : opts[i + 1]);
curr_arg++) {
- if ((dsetid = H5Dopen (fid, argv[curr_arg]))<0) {
- begin_obj (dump_header_format->datasetbegin, argv[curr_arg], dump_header_format->datasetblockbegin);
- indentation (COL);
- fprintf (stdout, "h5dump error: unable to open %s\n",
- argv[curr_arg]);
- end_obj(dump_header_format->datasetend, dump_header_format->datasetblockend);
- d_status = 1;
- } else {
- H5Gget_objinfo(dsetid, ".", TRUE, &statbuf);
- if (statbuf.nlink > 1) {
- index = search_obj (dset_table, statbuf.objno);
- if (index >= 0) {
- if (dset_table->objs[index].displayed) {
- begin_obj(dump_header_format->datasetbegin, argv[curr_arg], dump_header_format->datasetblockbegin);
- indentation (indent+COL);
- printf("%s \"%s\"\n", HARDLINK,
- dset_table->objs[index].objname);
- indentation (indent);
- end_obj(dump_header_format->datasetend, dump_header_format->datasetblockend);
- } else {
- strcpy(dset_table->objs[index].objname, argv[curr_arg]);
- dset_table->objs[index].displayed = 1;
- dump_dataset(dsetid, argv[curr_arg]);
- }
- } else d_status = 1;
- } else
+ if ((dsetid = H5Dopen (fid, argv[curr_arg]))<0) {
+ begin_obj(dump_header_format->datasetbegin, argv[curr_arg],
+ dump_header_format->datasetblockbegin);
+ indentation(COL);
+ fprintf(stdout, "h5dump error: unable to open %s\n",
+ argv[curr_arg]);
+ end_obj(dump_header_format->datasetend,
+ dump_header_format->datasetblockend);
+ d_status = 1;
+ } else {
+ H5Gget_objinfo(dsetid, ".", TRUE, &statbuf);
+
+ if (statbuf.nlink > 1) {
+ index = search_obj (dset_table, statbuf.objno);
+
+ if (index >= 0) {
+ if (dset_table->objs[index].displayed) {
+ begin_obj(dump_header_format->datasetbegin,
+ argv[curr_arg],
+ dump_header_format->datasetblockbegin);
+ indentation(indent + COL);
+ printf("%s \"%s\"\n", HARDLINK,
+ dset_table->objs[index].objname);
+ indentation(indent);
+ end_obj(dump_header_format->datasetend,
+ dump_header_format->datasetblockend);
+ } else {
+ strcpy(dset_table->objs[index].objname,
+ argv[curr_arg]);
+ dset_table->objs[index].displayed = 1;
+ dump_dataset(dsetid, argv[curr_arg]);
+ }
+ } else {
+ d_status = 1;
+ }
+ } else {
dump_dataset(dsetid, argv[curr_arg]);
- if (H5Dclose(dsetid)<1) d_status = 1;
- }
-
- }
-
-
-
- } else if (!strcmp(argv[opts[i]],"-g")) {
-
- for (curr_arg = opts[i]+1;
- curr_arg < ((i+1)==nopts?(argc-1):opts[i+1]);
+ }
+
+ if (H5Dclose(dsetid) < 1)
+ d_status = 1;
+ }
+ }
+ } else if (!strcmp(argv[opts[i]],"-g")) {
+ for (curr_arg = opts[i] + 1;
+ curr_arg < ((i + 1) == nopts ? (argc - 1) : opts[i + 1]);
curr_arg++) {
- if ((gid = H5Gopen (fid, argv[curr_arg])) < 0) {
- begin_obj (dump_header_format->groupbegin, argv[curr_arg], dump_header_format->groupblockbegin);
- indentation (COL);
- fprintf (stdout, "h5dump error: unable to open %s\n",
- argv[curr_arg]);
- end_obj(dump_header_format->groupend, dump_header_format->groupblockend);
- d_status = 1;
- } else {
- H5Gget_objinfo(gid, ".", TRUE, &statbuf);
- strcpy(prefix, argv[curr_arg]);
- dump_group(gid, argv[curr_arg]);
- if (H5Gclose (gid) < 0) d_status = 1;
- }
- }
-
- } else if (!strcmp(argv[opts[i]],"-l")) {
-
- for (curr_arg = opts[i]+1;
- curr_arg < ((i+1)==nopts?(argc-1):opts[i+1]);
+ if ((gid = H5Gopen(fid, argv[curr_arg])) < 0) {
+ begin_obj(dump_header_format->groupbegin, argv[curr_arg],
+ dump_header_format->groupblockbegin);
+ indentation(COL);
+ fprintf(stdout, "h5dump error: unable to open %s\n",
+ argv[curr_arg]);
+ end_obj(dump_header_format->groupend,
+ dump_header_format->groupblockend);
+ d_status = 1;
+ } else {
+ H5Gget_objinfo(gid, ".", TRUE, &statbuf);
+ strcpy(prefix, argv[curr_arg]);
+ dump_group(gid, argv[curr_arg]);
+
+ if (H5Gclose(gid) < 0)
+ d_status = 1;
+ }
+ }
+ } else if (!strcmp(argv[opts[i]],"-l")) {
+ for (curr_arg = opts[i] + 1;
+ curr_arg < ((i + 1) == nopts ? (argc - 1) : opts[i + 1]);
curr_arg++) {
-
-
- if (H5Gget_objinfo(fid, argv[curr_arg], FALSE, &statbuf) < 0) {
- begin_obj(dump_header_format->softlinkbegin, argv[curr_arg], dump_header_format->softlinkblockbegin);
- indentation (COL);
- fprintf(stdout, "h5dump error: unable to get obj info from %s\n", argv[curr_arg]);
- end_obj(dump_header_format->softlinkend, dump_header_format->softlinkblockend);
- d_status = 1;
-
- } else if (statbuf.type == H5G_LINK) {
-
- buf = malloc(statbuf.linklen*sizeof(char));
- begin_obj(dump_header_format->softlinkbegin, argv[curr_arg], dump_header_format->softlinkblockbegin);
- indentation (COL);
- if (H5Gget_linkval (fid, argv[curr_arg], statbuf.linklen, buf)>=0)
- printf ("LINKTARGET \"%s\"\n", buf);
- else {
- fprintf (stdout, "h5dump error: unable to get link value\n");
- d_status = 1;
- }
- end_obj(dump_header_format->softlinkend, dump_header_format->softlinkblockend);
- free(buf);
-
- } else {
- begin_obj(dump_header_format->softlinkbegin, argv[curr_arg], dump_header_format->softlinkblockbegin);
- indentation (COL);
- fprintf(stdout, "h5dump error: %s is not a link\n", argv[curr_arg]);
- end_obj(dump_header_format->softlinkend, dump_header_format->softlinkblockend);
- d_status = 1;
- }
-
- }
-
- } else if (!strcmp(argv[opts[i]],"-t")) {
-
-
- for (curr_arg = opts[i]+1;
- curr_arg < ((i+1)==nopts?(argc-1):opts[i+1]);
+ if (H5Gget_objinfo(fid, argv[curr_arg], FALSE, &statbuf) < 0) {
+ begin_obj(dump_header_format->softlinkbegin,
+ argv[curr_arg],
+ dump_header_format->softlinkblockbegin);
+ indentation(COL);
+ fprintf(stdout,
+ "h5dump error: unable to get obj info from %s\n",
+ argv[curr_arg]);
+ end_obj(dump_header_format->softlinkend,
+ dump_header_format->softlinkblockend);
+ d_status = 1;
+ } else if (statbuf.type == H5G_LINK) {
+ buf = malloc(statbuf.linklen*sizeof(char));
+ begin_obj(dump_header_format->softlinkbegin,
+ argv[curr_arg],
+ dump_header_format->softlinkblockbegin);
+ indentation(COL);
+
+ if (H5Gget_linkval(fid, argv[curr_arg], statbuf.linklen, buf) >= 0) {
+ printf("LINKTARGET \"%s\"\n", buf);
+ } else {
+ fprintf(stdout, "h5dump error: unable to get link value\n");
+ d_status = 1;
+ }
+
+ end_obj(dump_header_format->softlinkend,
+ dump_header_format->softlinkblockend);
+ free(buf);
+ } else {
+ begin_obj(dump_header_format->softlinkbegin,
+ argv[curr_arg],
+ dump_header_format->softlinkblockbegin);
+ indentation(COL);
+ fprintf(stdout, "h5dump error: %s is not a link\n", argv[curr_arg]);
+ end_obj(dump_header_format->softlinkend,
+ dump_header_format->softlinkblockend);
+ d_status = 1;
+ }
+ }
+ } else if (!strcmp(argv[opts[i]],"-t")) {
+ for (curr_arg = opts[i] + 1;
+ curr_arg < ((i + 1) == nopts ? (argc - 1) : opts[i + 1]);
curr_arg++) {
-
- if ((typeid=H5Topen (fid, argv[curr_arg])) < 0) {
-
- /* check if argv[curr_arg] is unamed data type */
- index = 0;
- while (index < type_table->nobjs ) {
- if (!type_table->objs[index].recorded) { /* unamed data type */
- sprintf(name,"#%lu:%lu\n", type_table->objs[index].objno[0],
- type_table->objs[index].objno[1]);
- sprintf(name1,"/#%lu:%lu\n", type_table->objs[index].objno[0],
- type_table->objs[index].objno[1]);
- if (!strncmp(name, argv[curr_arg], strlen(argv[curr_arg])) ||
- !strncmp(name1, argv[curr_arg], strlen(argv[curr_arg]))) {
+ if ((typeid = H5Topen(fid, argv[curr_arg])) < 0) {
+ /* check if argv[curr_arg] is unamed data type */
+ index = 0;
+
+ while (index < type_table->nobjs ) {
+ if (!type_table->objs[index].recorded) { /* unamed data type */
+ sprintf(name, "#%lu:%lu\n",
+ type_table->objs[index].objno[0],
+ type_table->objs[index].objno[1]);
+ sprintf(name1, "/#%lu:%lu\n",
+ type_table->objs[index].objno[0],
+ type_table->objs[index].objno[1]);
+
+ if (!strncmp(name, argv[curr_arg], strlen(argv[curr_arg])) ||
+ !strncmp(name1, argv[curr_arg], strlen(argv[curr_arg])))
break;
- }
- }
- index++;
- }
- if (index == type_table->nobjs) { /* unknown type */
- begin_obj (dump_header_format->datatypebegin, argv[curr_arg], dump_header_format->datatypeblockbegin);
- indentation (COL);
- fprintf (stdout, "h5dump error: unable to open %s\n",
- argv[curr_arg]);
- end_obj(dump_header_format->datatypeend, dump_header_format->datatypeblockend);
- d_status = 1;
- } else {
- dsetid = H5Dopen (fid, type_table->objs[index].objname) ;
- typeid = H5Dget_type (dsetid);
- dump_named_datatype (typeid, argv[curr_arg]);
- H5Tclose(typeid);
- H5Dclose(dsetid);
- }
-
- } else {
- dump_named_datatype (typeid, argv[curr_arg]);
- if (H5Tclose(typeid) < 0) d_status = 1;
- }
- }
- }
- }
+ }
+
+ index++;
+ }
+
+ if (index == type_table->nobjs) {
+ /* unknown type */
+ begin_obj(dump_header_format->datatypebegin, argv[curr_arg],
+ dump_header_format->datatypeblockbegin);
+ indentation(COL);
+ fprintf(stdout, "h5dump error: unable to open %s\n",
+ argv[curr_arg]);
+ end_obj(dump_header_format->datatypeend,
+ dump_header_format->datatypeblockend);
+ d_status = 1;
+ } else {
+ dsetid = H5Dopen(fid, type_table->objs[index].objname);
+ typeid = H5Dget_type(dsetid);
+ dump_named_datatype(typeid, argv[curr_arg]);
+ H5Tclose(typeid);
+ H5Dclose(dsetid);
+ }
+ } else {
+ dump_named_datatype(typeid, argv[curr_arg]);
+
+ if (H5Tclose(typeid) < 0)
+ d_status = 1;
+ }
+ }
+ }
+ }
+ }
end_obj(dump_header_format->fileend, dump_header_format->fileblockend);
done:
-
- H5Eset_auto (func, edata);
+ H5Eset_auto(func, edata);
free(opts);
- if (H5Fclose (fid) < 0) d_status = 1;
-
- free (group_table->objs);
- free (dset_table->objs);
- free (type_table->objs);
- free (prefix);
- free (info->prefix);
- free (info);
- return d_status;
-}
+ if (H5Fclose(fid) < 0)
+ d_status = 1;
+ free(group_table->objs);
+ free(dset_table->objs);
+ free(type_table->objs);
+ free(prefix);
+ free(info->prefix);
+ free(info);
+ return d_status;
+}
/*-------------------------------------------------------------------------
* Function: print_enum
@@ -1685,19 +1718,22 @@ done:
* NOTE: this function was taken from h5ls. should be moved into the toolslib
*
*-----------------------------------------------------------------------*/
-static void print_enum(hid_t type){
- char **name=NULL; /*member names */
- unsigned char *value=NULL; /*value array */
- int nmembs; /*number of members */
- int nchars; /*number of output characters */
- hid_t super; /*enum base integer type */
- hid_t native=-1; /*native integer data type */
- size_t dst_size; /*destination value type size */
- int i; /*miscellaneous counters */
+static void
+print_enum(hid_t type)
+{
+ char **name = NULL; /*member names */
+ unsigned char *value = NULL;/*value array */
+ int nmembs; /*number of members */
+ int nchars; /*number of output characters */
+ hid_t super; /*enum base integer type */
+ hid_t native = -1; /*native integer data type */
+ size_t dst_size; /*destination value type size */
+ int i; /*miscellaneous counters */
size_t j;
nmembs = H5Tget_nmembers(type);
super = H5Tget_super(type);
+
/*
* Determine what data type to use for the native values. To simplify
* things we entertain three possibilities:
@@ -1706,60 +1742,68 @@ static void print_enum(hid_t type){
* 3. raw format
*/
if (H5Tget_size(type)<=sizeof(long_long)) {
- dst_size = sizeof(long_long);
- if (H5T_SGN_NONE==H5Tget_sign(type)) {
- native = H5T_NATIVE_ULLONG;
- } else {
- native = H5T_NATIVE_LLONG;
- }
+ dst_size = sizeof(long_long);
+
+ if (H5T_SGN_NONE==H5Tget_sign(type)) {
+ native = H5T_NATIVE_ULLONG;
+ } else {
+ native = H5T_NATIVE_LLONG;
+ }
} else {
- dst_size = H5Tget_size(type);
+ dst_size = H5Tget_size(type);
}
/* Get the names and raw values of all members */
- name = calloc(nmembs, sizeof(char*));
+ name = calloc(nmembs, sizeof(char *));
value = calloc(nmembs, MAX(H5Tget_size(type), dst_size));
- for (i=0; i<nmembs; i++) {
- name[i] = H5Tget_member_name(type, i);
- H5Tget_member_value(type, i, value+i*H5Tget_size(type));
+
+ for (i = 0; i < nmembs; i++) {
+ name[i] = H5Tget_member_name(type, i);
+ H5Tget_member_value(type, i, value + i * H5Tget_size(type));
}
/* Convert values to native data type */
- if (native>0) H5Tconvert(super, native, nmembs, value, NULL, H5P_DEFAULT);
+ if (native > 0)
+ H5Tconvert(super, native, nmembs, value, NULL, H5P_DEFAULT);
/* Sort members by increasing value */
/*not implemented yet*/
/* Print members */
- for (i=0; i<nmembs; i++) {
- printf("\n%*s", indent+4, "");
- nchars = printf("\"%s\"",name[i]);/*display_string(stdout, name[i], TRUE);*/
- printf("%*s ", MAX(0, 16-nchars), "");
-
- if (native<0) {
- printf("0x");
- for (j=0; j<dst_size; j++) {
- printf("%02x", value[i*dst_size+j]);
- }
- } else if (H5T_SGN_NONE==H5Tget_sign(native)) {
- printf("%"PRINTF_LL_WIDTH"u",
- *((unsigned long_long*)((void*)(value+i*dst_size))));
- } else {
- printf("%"PRINTF_LL_WIDTH"d",
- *((long_long*)((void*)(value+i*dst_size))));
- }
- printf(";");
+ for (i = 0; i < nmembs; i++) {
+ printf("\n%*s", indent + 4, "");
+ nchars = printf("\"%s\"", name[i]);/*display_string(stdout, name[i], TRUE);*/
+ printf("%*s ", MAX(0, 16 - nchars), "");
+
+ if (native < 0) {
+ printf("0x");
+
+ for (j = 0; j < dst_size; j++)
+ printf("%02x", value[i * dst_size + j]);
+ } else if (H5T_SGN_NONE == H5Tget_sign(native)) {
+ printf("%" PRINTF_LL_WIDTH "u",
+ *((unsigned long_long *)((void *)(value + i * dst_size))));
+ } else {
+ printf("%" PRINTF_LL_WIDTH "d",
+ *((long_long *)((void *)(value + i * dst_size))));
+ }
+
+ printf(";");
}
/* Release resources */
- for (i=0; i<nmembs; i++) free(name[i]);
+ for (i = 0; i < nmembs; i++)
+ free(name[i]);
+
free(name);
free(value);
H5Tclose(super);
- if (0==nmembs) printf("\n%*s <empty>", indent+4, "");
- /* printf("\n%*s}", indent, "");*/
- /* return TRUE;*/
+ if (0 == nmembs)
+ printf("\n%*s <empty>", indent+4, "");
+
+ /*printf("\n%*s}", indent, "");*/
+ /*return TRUE;*/
}
/*-------------------------------------------------------------------------
@@ -1775,14 +1819,13 @@ static void print_enum(hid_t type){
*
*-----------------------------------------------------------------------*/
static void
-dump_oid(hid_t oid){
-
-
+dump_oid(hid_t oid)
+{
indent += COL;
- indentation (indent);
+ indentation(indent);
- printf ("%s %s ", OBJID, BEGIN);
+ printf("%s %s ", OBJID, BEGIN);
printf("%d", oid);
- printf (" %s\n", END);
+ printf(" %s\n", END);
indent -= COL;
}
diff --git a/tools/h5dump.h b/tools/h5dump.h
index 083ac39..af7b348 100644
--- a/tools/h5dump.h
+++ b/tools/h5dump.h
@@ -1,16 +1,17 @@
-#ifndef _H5DUMP_H
-#define _H5DUMP_H
+#ifndef H5DUMP_H__
+#define H5DUMP_H__
#include <hdf5.h>
+#define H5DUMP_MAX_RANK H5S_MAX_RANK
+#define begin_obj(obj,name,begin) \
+ if (name) \
+ printf("%s \"%s\" %s\n", (obj), (name), (begin)); \
+ else \
+ printf("%s %s\n", (obj), (begin));
+#define end_obj(obj,end) \
+ printf("%s %s\n", (end), (obj));
-
-#define H5DUMP_MAX_RANK H5S_MAX_RANK
-
-#define begin_obj(obj,name, begin) if (name) printf("%s \"%s\" %s\n", obj, name, begin); else printf("%s %s\n",obj,begin);
-#define end_obj(obj, end) printf("%s %s\n", end,obj);
-
-
-#endif
+#endif /* H5DUMP_H__ */
generated by cgit v0.12 at 2024-12-25 18:13:05 (GMT)