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-rw-r--r--tools/h5copy/h5copy.c154
-rw-r--r--tools/h5dump/h5dump.h1
-rw-r--r--tools/h5dump/h5dump_extern.h1
-rw-r--r--tools/h5repack/h5repack.c63
-rw-r--r--tools/h5repack/h5repack_copy.c530
-rw-r--r--tools/h5repack/h5repack_main.c402
-rw-r--r--tools/h5repack/h5repack_refs.c151
-rw-r--r--tools/h5repack/h5repack_verify.c139
-rw-r--r--tools/lib/h5tools.c1
-rw-r--r--tools/lib/h5tools.h13
10 files changed, 755 insertions, 700 deletions
diff --git a/tools/h5copy/h5copy.c b/tools/h5copy/h5copy.c
index 278cd3e..9947168 100644
--- a/tools/h5copy/h5copy.c
+++ b/tools/h5copy/h5copy.c
@@ -23,7 +23,7 @@
#define PROGRAMNAME "h5copy"
/* command-line options: short and long-named parameters */
-static const char *s_opts = "d:f:hi:o:ps:vV";
+static const char *s_opts = "d:f:hi:o:ps:vVE";
static struct long_options l_opts[] = {
{ "destination", require_arg, 'd' },
{ "flag", require_arg, 'f' },
@@ -34,6 +34,7 @@ static struct long_options l_opts[] = {
{ "source", require_arg, 's' },
{ "verbose", no_arg, 'v' },
{ "version", no_arg, 'V' },
+ { "enable-error-stack", no_arg, 'E' },
{ NULL, 0, '\0' }
};
char *fname_src = NULL;
@@ -89,45 +90,46 @@ leave(int ret)
*-------------------------------------------------------------------------
*/
static void
-usage (void)
+usage (const char *prog)
{
- HDfprintf(stdout, "\
-usage: h5copy [OPTIONS] [OBJECTS...]\n\
- OBJECTS\n\
- -i, --input input file name\n\
- -o, --output output file name\n\
- -s, --source source object name\n\
- -d, --destination destination object name\n\
- OPTIONS\n\
- -h, --help Print a usage message and exit\n\
- -p, --parents No error if existing, make parent groups as needed\n\
- -v, --verbose Print information about OBJECTS and OPTIONS\n\
- -V, --version Print version number and exit\n\
- -f, --flag Flag type\n\n\
- Flag type is one of the following strings:\n\n\
- shallow Copy only immediate members for groups\n\n\
- soft Expand soft links into new objects\n\n\
- ext Expand external links into new objects\n\n\
- ref Copy references and any referenced objects, i.e., objects\n\
- that the references point to.\n\
- Referenced objects are copied in addition to the objects\n\
- specified on the command line and reference datasets are\n\
- populated with correct reference values. Copies of referenced\n\
- datasets outside the copy range specified on the command line\n\
- will normally have a different name from the original.\n\
- (Default:Without this option, reference value(s) in any\n\
- reference datasets are set to NULL and referenced objects are\n\
- not copied unless they are otherwise within the copy range\n\
- specified on the command line.)\n\n\
- noattr Copy object without copying attributes\n\n\
- allflags Switches all flags from the default to the non-default setting\n\n\
- These flag types correspond to the following API symbols\n\n\
- H5O_COPY_SHALLOW_HIERARCHY_FLAG\n\
- H5O_COPY_EXPAND_SOFT_LINK_FLAG\n\
- H5O_COPY_EXPAND_EXT_LINK_FLAG\n\
- H5O_COPY_EXPAND_REFERENCE_FLAG\n\
- H5O_COPY_WITHOUT_ATTR_FLAG\n\
- H5O_COPY_ALL\n");
+ FLUSHSTREAM(rawoutstream);
+ PRINTVALSTREAM(rawoutstream, "\n");
+ PRINTVALSTREAM(rawoutstream, "usage: h5copy [OPTIONS] [OBJECTS...]\n");
+ PRINTVALSTREAM(rawoutstream, " OBJECTS\n");
+ PRINTVALSTREAM(rawoutstream, " -i, --input input file name\n");
+ PRINTVALSTREAM(rawoutstream, " -o, --output output file name\n");
+ PRINTVALSTREAM(rawoutstream, " -s, --source source object name\n");
+ PRINTVALSTREAM(rawoutstream, " -d, --destination destination object name\n");
+ PRINTVALSTREAM(rawoutstream, " OPTIONS\n");
+ PRINTVALSTREAM(rawoutstream, " -h, --help Print a usage message and exit\n");
+ PRINTVALSTREAM(rawoutstream, " -p, --parents No error if existing, make parent groups as needed\n");
+ PRINTVALSTREAM(rawoutstream, " -v, --verbose Print information about OBJECTS and OPTIONS\n");
+ PRINTVALSTREAM(rawoutstream, " -V, --version Print version number and exit\n");
+ PRINTVALSTREAM(rawoutstream, " -f, --flag Flag type\n\n");
+ PRINTVALSTREAM(rawoutstream, " Flag type is one of the following strings:\n\n");
+ PRINTVALSTREAM(rawoutstream, " shallow Copy only immediate members for groups\n\n");
+ PRINTVALSTREAM(rawoutstream, " soft Expand soft links into new objects\n\n");
+ PRINTVALSTREAM(rawoutstream, " ext Expand external links into new objects\n\n");
+ PRINTVALSTREAM(rawoutstream, " ref Copy references and any referenced objects, i.e., objects\n");
+ PRINTVALSTREAM(rawoutstream, " that the references point to.\n");
+ PRINTVALSTREAM(rawoutstream, " Referenced objects are copied in addition to the objects\n");
+ PRINTVALSTREAM(rawoutstream, " specified on the command line and reference datasets are\n");
+ PRINTVALSTREAM(rawoutstream, " populated with correct reference values. Copies of referenced\n");
+ PRINTVALSTREAM(rawoutstream, " datasets outside the copy range specified on the command line\n");
+ PRINTVALSTREAM(rawoutstream, " will normally have a different name from the original.\n");
+ PRINTVALSTREAM(rawoutstream, " (Default:Without this option, reference value(s) in any\n");
+ PRINTVALSTREAM(rawoutstream, " reference datasets are set to NULL and referenced objects are\n");
+ PRINTVALSTREAM(rawoutstream, " not copied unless they are otherwise within the copy range\n");
+ PRINTVALSTREAM(rawoutstream, " specified on the command line.)\n\n");
+ PRINTVALSTREAM(rawoutstream, " noattr Copy object without copying attributes\n\n");
+ PRINTVALSTREAM(rawoutstream, " allflags Switches all flags from the default to the non-default setting\n\n");
+ PRINTVALSTREAM(rawoutstream, " These flag types correspond to the following API symbols\n\n");
+ PRINTVALSTREAM(rawoutstream, " H5O_COPY_SHALLOW_HIERARCHY_FLAG\n");
+ PRINTVALSTREAM(rawoutstream, " H5O_COPY_EXPAND_SOFT_LINK_FLAG\n");
+ PRINTVALSTREAM(rawoutstream, " H5O_COPY_EXPAND_EXT_LINK_FLAG\n");
+ PRINTVALSTREAM(rawoutstream, " H5O_COPY_EXPAND_REFERENCE_FLAG\n");
+ PRINTVALSTREAM(rawoutstream, " H5O_COPY_WITHOUT_ATTR_FLAG\n");
+ PRINTVALSTREAM(rawoutstream, " H5O_COPY_ALL\n");
}
@@ -215,6 +217,11 @@ static int parse_flag(const char* s_flag, unsigned *flag)
int
main (int argc, const char *argv[])
{
+ int ret_value = 0; /*no need to LEAVE() on ERROR: HERR_INIT(int, SUCCEED) */
+ H5E_auto2_t func;
+ H5E_auto2_t tools_func;
+ void *edata;
+ void *tools_edata;
hid_t fid_src = -1;
hid_t fid_dst = -1;
unsigned flag = 0;
@@ -229,16 +236,24 @@ main (int argc, const char *argv[])
h5tools_setprogname(PROGRAMNAME);
h5tools_setstatus(EXIT_SUCCESS);
- /* initialize h5tools lib */
+ /* Disable error reporting */
+ H5Eget_auto2(H5E_DEFAULT, &func, &edata);
+ H5Eset_auto2(H5E_DEFAULT, NULL, NULL);
+
+ /* Initialize h5tools lib */
h5tools_init();
+ /* Disable tools error reporting */
+ H5Eget_auto2(H5tools_ERR_STACK_g, &tools_func, &tools_edata);
+ H5Eset_auto2(H5tools_ERR_STACK_g, NULL, NULL);
+
/* init linkinfo struct */
HDmemset(&linkinfo, 0, sizeof(h5tool_link_info_t));
/* Check for no command line parameters */
- if(argc == 1)
+ if(argc == 1)
{
- usage();
+ usage(h5tools_getprogname());
leave(EXIT_FAILURE);
} /* end if */
@@ -255,14 +270,14 @@ main (int argc, const char *argv[])
/* validate flag */
if (parse_flag(opt_arg,&flag)<0)
{
- usage();
+ usage(h5tools_getprogname());
leave(EXIT_FAILURE);
}
str_flag = HDstrdup(opt_arg);
break;
case 'h':
- usage();
+ usage(h5tools_getprogname());
leave(EXIT_SUCCESS);
break;
@@ -291,8 +306,12 @@ main (int argc, const char *argv[])
verbose = 1;
break;
+ case 'E':
+ enable_error_stack = TRUE;
+ break;
+
default:
- usage();
+ usage(h5tools_getprogname());
leave(EXIT_FAILURE);
}
} /* end of while */
@@ -304,31 +323,36 @@ main (int argc, const char *argv[])
if (fname_src==NULL)
{
error_msg("Input file name missing\n");
- usage();
+ usage(h5tools_getprogname());
leave(EXIT_FAILURE);
}
if (fname_dst==NULL)
{
error_msg("Output file name missing\n");
- usage();
+ usage(h5tools_getprogname());
leave(EXIT_FAILURE);
}
if (oname_src==NULL)
{
error_msg("Source object name missing\n");
- usage();
+ usage(h5tools_getprogname());
leave(EXIT_FAILURE);
}
if (oname_dst==NULL)
{
error_msg("Destination object name missing\n");
- usage();
+ usage(h5tools_getprogname());
leave(EXIT_FAILURE);
}
+ if (enable_error_stack) {
+ H5Eset_auto2(H5E_DEFAULT, func, edata);
+ H5Eset_auto2(H5tools_ERR_STACK_g, tools_func, tools_edata);
+ }
+
/*-------------------------------------------------------------------------
* open output file
*-------------------------------------------------------------------------*/
@@ -393,19 +417,19 @@ main (int argc, const char *argv[])
/* create property to pass copy options */
if ( (ocpl_id = H5Pcreate(H5P_OBJECT_COPY)) < 0)
- goto error;
+ HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pcreate failed");
/* set options for object copy */
if (flag)
{
if ( H5Pset_copy_object(ocpl_id, flag) < 0)
- goto error;
+ HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_copy_object failed");
}
/* Create link creation property list */
if((lcpl_id = H5Pcreate(H5P_LINK_CREATE)) < 0) {
error_msg("Could not create link creation property list\n");
- goto error;
+ HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pcreate failed");
} /* end if */
/* Check for creating intermediate groups */
@@ -413,7 +437,7 @@ main (int argc, const char *argv[])
/* Set the intermediate group creation property */
if(H5Pset_create_intermediate_group(lcpl_id, 1) < 0) {
error_msg("Could not set property for creating parent groups\n");
- goto error;
+ HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pset_create_intermediate_group failed");
} /* end if */
/* Display some output if requested */
@@ -424,7 +448,7 @@ main (int argc, const char *argv[])
{
size_t i, len;
- len = HDstrlen(oname_dst);
+ len = HDstrlen(oname_dst);
/* check if all the parents groups exist. skip root group */
for (i = 1; i < len; i++)
@@ -440,7 +464,7 @@ main (int argc, const char *argv[])
{
error_msg("group <%s> doesn't exist. Use -p to create parent groups.\n", str_ptr);
HDfree(str_ptr);
- goto error;
+ HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Lexists failed");
}
HDfree(str_ptr);
}
@@ -450,17 +474,17 @@ main (int argc, const char *argv[])
/*-------------------------------------------------------------------------
* do the copy
*-------------------------------------------------------------------------*/
-
+
if(verbose)
linkinfo.opt.msg_mode = 1;
-
+
li_ret = H5tools_get_symlink_info(fid_src, oname_src, &linkinfo, 1);
if (li_ret == 0) /* dangling link */
{
- if(H5Lcopy(fid_src, oname_src,
+ if(H5Lcopy(fid_src, oname_src,
fid_dst, oname_dst,
H5P_DEFAULT, H5P_DEFAULT) < 0)
- goto error;
+ HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Lcopy failed");
}
else /* valid link */
{
@@ -470,7 +494,7 @@ main (int argc, const char *argv[])
oname_dst, /* Name of the destination object */
ocpl_id, /* Object copy property list */
lcpl_id)<0) /* Link creation property list */
- goto error;
+ HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Ocopy failed");
}
/* free link info path */
@@ -479,19 +503,19 @@ main (int argc, const char *argv[])
/* close propertis */
if(H5Pclose(ocpl_id)<0)
- goto error;
+ HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pclose failed");
if(H5Pclose(lcpl_id)<0)
- goto error;
+ HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Pclose failed");
/* close files */
if (H5Fclose(fid_src)<0)
- goto error;
+ HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Fclose failed");
if (H5Fclose(fid_dst)<0)
- goto error;
+ HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "H5Fclose failed");
leave(EXIT_SUCCESS);
-error:
+done:
printf("Error in copy...Exiting\n");
/* free link info path */
diff --git a/tools/h5dump/h5dump.h b/tools/h5dump/h5dump.h
index 7cf4efd..8f86567 100644
--- a/tools/h5dump/h5dump.h
+++ b/tools/h5dump/h5dump.h
@@ -74,7 +74,6 @@ int display_fi = FALSE; /*file index */
int display_ai = TRUE; /*array index */
int display_escape = FALSE; /*escape non printable characters */
int display_region = FALSE; /*print region reference data */
-int enable_error_stack= FALSE; /* re-enable error stack */
int disable_compact_subset= FALSE; /* disable compact form of subset notation */
int display_packed_bits = FALSE; /*print 1-8 byte numbers as packed bits*/
int include_attrs = TRUE; /* Display attributes */
diff --git a/tools/h5dump/h5dump_extern.h b/tools/h5dump/h5dump_extern.h
index 62477d0..262cef1 100644
--- a/tools/h5dump/h5dump_extern.h
+++ b/tools/h5dump/h5dump_extern.h
@@ -73,7 +73,6 @@ extern int display_fi; /*file index */
extern int display_ai; /*array index */
extern int display_escape; /*escape non printable characters */
extern int display_region; /*print region reference data */
-extern int enable_error_stack; /* re-enable error stack */
extern int disable_compact_subset; /* disable compact form of subset notation */
extern int display_packed_bits; /*print 1-8 byte numbers as packed bits*/
extern int include_attrs; /* Display attributes */
diff --git a/tools/h5repack/h5repack.c b/tools/h5repack/h5repack.c
index 286d7f0..cf30b2b 100644
--- a/tools/h5repack/h5repack.c
+++ b/tools/h5repack/h5repack.c
@@ -372,7 +372,8 @@ done:
*/
int copy_attr(hid_t loc_in, hid_t loc_out, named_dt_t **named_dt_head_p,
trav_table_t *travt, pack_opt_t *options) {
- hid_t attr_id = -1; /* attr ID */
+ int ret_value = 0; /*no need to LEAVE() on ERROR: HERR_INIT(int, SUCCEED) */
+ hid_t attr_id = -1; /* attr ID */
hid_t attr_out = -1; /* attr ID */
hid_t space_id = -1; /* space ID */
hid_t ftype_id = -1; /* file type ID */
@@ -391,7 +392,7 @@ int copy_attr(hid_t loc_in, hid_t loc_out, named_dt_t **named_dt_head_p,
H5T_class_t type_class = -1;
if (H5Oget_info(loc_in, &oinfo) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Oget_info failed");
/*-------------------------------------------------------------------------
* copy all attributes
@@ -401,36 +402,36 @@ int copy_attr(hid_t loc_in, hid_t loc_out, named_dt_t **named_dt_head_p,
/* open attribute */
if ((attr_id = H5Aopen_by_idx(loc_in, ".", H5_INDEX_CRT_ORDER,
H5_ITER_INC, (hsize_t) u, H5P_DEFAULT, H5P_DEFAULT)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Aopen_by_idx failed");
/* get name */
if (H5Aget_name(attr_id, (size_t) 255, name) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
/* get the file datatype */
if ((ftype_id = H5Aget_type(attr_id)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Aget_type failed");
/* Check if the datatype is committed */
if ((is_named = H5Tcommitted(ftype_id)) < 0)
- goto error;
- if (is_named && travt) {
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tcommitted failed");
+ if (is_named && travt) {
hid_t fidout;
/* Create out file id */
if ((fidout = H5Iget_file_id(loc_out)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Iget_file_id failed");
/* Copy named dt */
if ((wtype_id = copy_named_datatype(ftype_id, fidout,
named_dt_head_p, travt, options)) < 0) {
H5Fclose(fidout);
- goto error;
- } /* end if */
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "copy_named_datatype failed");
+ } /* end if */
if (H5Fclose(fidout) < 0)
- goto error;
- } /* end if */
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Fclose failed");
+ } /* end if */
else {
if (options->use_native == 1)
wtype_id = h5tools_get_native_type(ftype_id);
@@ -440,18 +441,18 @@ int copy_attr(hid_t loc_in, hid_t loc_out, named_dt_t **named_dt_head_p,
/* get the dataspace handle */
if ((space_id = H5Aget_space(attr_id)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Aget_space failed");
/* get dimensions */
if ((rank = H5Sget_simple_extent_dims(space_id, dims, NULL)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sget_simple_extent_dims failed");
nelmts = 1;
for (j = 0; j < rank; j++)
nelmts *= dims[j];
if ((msize = H5Tget_size(wtype_id)) == 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tget_size failed");
/*-------------------------------------------------------------------------
* object references are a special case. We cannot just copy the buffers,
@@ -495,10 +496,10 @@ int copy_attr(hid_t loc_in, hid_t loc_out, named_dt_t **named_dt_head_p,
buf = (void *) HDmalloc((size_t)(nelmts * msize));
if (buf == NULL) {
error_msg("h5repack", "cannot read into memory\n");
- goto error;
- } /* end if */
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "HDmalloc failed");
+ } /* end if */
if (H5Aread(attr_id, wtype_id, buf) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Aread failed");
/*-------------------------------------------------------------------------
* copy
@@ -507,13 +508,13 @@ int copy_attr(hid_t loc_in, hid_t loc_out, named_dt_t **named_dt_head_p,
if ((attr_out = H5Acreate2(loc_out, name, wtype_id, space_id,
H5P_DEFAULT, H5P_DEFAULT)) < 0)
- goto error;
- if (H5Awrite(attr_out, wtype_id, buf) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Acreate2 failed");
+ if (H5Awrite(attr_out, wtype_id, buf) < 0)
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Awrite failed");
/*close*/
if (H5Aclose(attr_out) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Aclose failed");
/* Check if we have VL data and string in the attribute's datatype that must
* be reclaimed */
@@ -532,18 +533,18 @@ int copy_attr(hid_t loc_in, hid_t loc_out, named_dt_t **named_dt_head_p,
*/
if (H5Tclose(ftype_id) < 0)
- goto error;
- if (H5Tclose(wtype_id) < 0)
- goto error;
- if (H5Sclose(space_id) < 0)
- goto error;
- if (H5Aclose(attr_id) < 0)
- goto error;
- } /* u */
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed");
+ if (H5Tclose(wtype_id) < 0)
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed");
+ if (H5Sclose(space_id) < 0)
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sclose failed");
+ if (H5Aclose(attr_id) < 0)
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Aclose failed");
+ } /* u */
return 0;
-error:
+done:
H5E_BEGIN_TRY
{
if (buf) {
diff --git a/tools/h5repack/h5repack_copy.c b/tools/h5repack/h5repack_copy.c
index 1171ab8..9c01b7e 100644
--- a/tools/h5repack/h5repack_copy.c
+++ b/tools/h5repack/h5repack_copy.c
@@ -44,7 +44,7 @@
H5Ewalk2(H5E_DEFAULT, H5E_WALK_DOWNWARD, walk_error_callback, &_err_num); \
H5Eget_msg(_err_num, NULL, _msg, (size_t)80); \
error_msg("%s %s -- %s\n", #_fun, "failed", _msg); \
- goto error; \
+ goto done; \
} \
} H5E_END_TRY; \
}
@@ -98,7 +98,8 @@ static herr_t walk_error_callback(H5_ATTR_UNUSED unsigned n, const H5E_error2_t
*/
int copy_objects(const char* fnamein, const char* fnameout, pack_opt_t *options) {
- hid_t fidin;
+ int ret_value = 0; /*no need to LEAVE() on ERROR: HERR_INIT(int, SUCCEED) */
+ hid_t fidin;
hid_t fidout = -1;
trav_table_t *travt = NULL;
hsize_t ub_size = 0; /* size of user block */
@@ -112,8 +113,8 @@ int copy_objects(const char* fnamein, const char* fnameout, pack_opt_t *options)
if ((fidin = h5tools_fopen(fnamein, H5F_ACC_RDONLY, H5P_DEFAULT, NULL, NULL,
(size_t) 0)) < 0) {
error_msg("<%s>: %s\n", fnamein, H5FOPENERROR);
- goto out;
- }
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
+ }
/* get user block size and file space strategy/threshold */
{
@@ -121,32 +122,32 @@ int copy_objects(const char* fnamein, const char* fnameout, pack_opt_t *options)
if ((fcpl_in = H5Fget_create_plist(fidin)) < 0) {
error_msg("failed to retrieve file creation property list\n");
- goto out;
- }
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
+ }
if (H5Pget_userblock(fcpl_in, &ub_size) < 0) {
error_msg("failed to retrieve userblock size\n");
- goto out;
- }
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
+ }
if (!options->fs_strategy) {
if (H5Pget_file_space(fcpl_in, &options->fs_strategy, NULL) < 0) {
error_msg("failed to retrieve file space strategy\n");
- goto out;
- }
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
+ }
}
if (!options->fs_threshold) {
if (H5Pget_file_space(fcpl_in, NULL, &options->fs_threshold) < 0) {
error_msg("failed to retrieve file space threshold\n");
- goto out;
- }
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
+ }
}
if (H5Pclose(fcpl_in) < 0) {
error_msg("failed to close property list\n");
- goto out;
- }
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
+ }
}
/* Check if we need to create a non-default file creation property list */
@@ -154,14 +155,14 @@ int copy_objects(const char* fnamein, const char* fnameout, pack_opt_t *options)
/* Create file creation property list */
if ((fcpl = H5Pcreate(H5P_FILE_CREATE)) < 0) {
error_msg("fail to create a file creation property list\n");
- goto out;
- }
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
+ }
if (ub_size > 0) {
if (H5Pset_userblock(fcpl, ub_size) < 0) {
error_msg("failed to set non-default userblock size\n");
- goto out;
- }
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
+ }
}
if (options->latest) {
@@ -173,8 +174,8 @@ int copy_objects(const char* fnamein, const char* fnameout, pack_opt_t *options)
(unsigned) options->grp_indexed) < 0) {
error_msg(
"fail to adjust group creation parameters for root group\n");
- goto out;
- }
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
+ }
for (i = 0; i < 5; i++) {
if (options->msg_size[i] > 0) {
@@ -211,8 +212,8 @@ int copy_objects(const char* fnamein, const char* fnameout, pack_opt_t *options)
if (H5Pset_shared_mesg_nindexes(fcpl, nindex) < 0) {
error_msg(
"fail to set the number of shared object header message indexes\n");
- goto out;
- }
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
+ }
/* msg_size[0]=dataspace, 1=datatype, 2=file value, 3=filter pipleline, 4=attribute */
for (i = 0; i < (nindex - 1); i++) {
@@ -220,22 +221,22 @@ int copy_objects(const char* fnamein, const char* fnameout, pack_opt_t *options)
min_mesg_sizes[i]) < 0) {
error_msg(
"fail to configure the specified shared object header message index\n");
- goto out;
- } /* end if */
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
+ } /* end if */
} /* end for */
} /* if (nindex>0) */
/* Create file access property list */
if ((fapl = H5Pcreate(H5P_FILE_ACCESS)) < 0) {
error_msg("Could not create file access property list\n");
- goto out;
- } /* end if */
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
+ } /* end if */
if (H5Pset_libver_bounds(fapl, H5F_LIBVER_LATEST, H5F_LIBVER_LATEST) < 0) {
error_msg(
"Could not set property for using latest version of the format\n");
- goto out;
- } /* end if */
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
+ } /* end if */
} /* end if */
} /* end if */
#if defined (H5REPACK_DEBUG_USER_BLOCK)
@@ -252,101 +253,100 @@ int copy_objects(const char* fnamein, const char* fnameout, pack_opt_t *options)
/* create a file creation property list */
if ((fcpl = H5Pcreate(H5P_FILE_CREATE)) < 0) {
error_msg("fail to create a file creation property list\n");
- goto out;
- }
- }
-
- /* set user block size */
- if (H5Pset_userblock(fcpl, options->ublock_size) < 0) {
- error_msg("failed to set userblock size\n");
- goto out;
- }
- }
-
- /*-------------------------------------------------------------------------
- * set alignment options
- *-------------------------------------------------------------------------
- */
- if (options->alignment > 0) {
- /* either use the FAPL already created or create a new one */
- if (fapl == H5P_DEFAULT) {
- /* create a file access property list */
- if ((fapl = H5Pcreate(H5P_FILE_ACCESS)) < 0) {
- error_msg("Could not create file access property list\n");
- goto out;
- }
- }
-
- if (H5Pset_alignment(fapl, options->threshold, options->alignment) < 0) {
- error_msg("failed to set alignment\n");
- goto out;
- }
- }
-
- /*-------------------------------------------------------------------------
- * set metadata block size option
- *-------------------------------------------------------------------------
- */
- if (options->meta_block_size > 0) {
- /* either use the FAPL already created or create a new one */
- if (fapl == H5P_DEFAULT) {
- /* create a file access property list */
- if ((fapl = H5Pcreate(H5P_FILE_ACCESS)) < 0) {
- error_msg("Could not create file access property list\n");
- goto out;
- }
- }
-
- if (H5Pset_meta_block_size(fapl, options->meta_block_size) < 0) {
- error_msg("failed to set metadata block size\n");
- goto out;
- }
- }
-
- /*-------------------------------------------------------------------------
- * set free-space strategy options
- *-------------------------------------------------------------------------
- */
-
- /* either use the FCPL already created or create a new one */
- if (fcpl == H5P_DEFAULT) {
- /* create a file creation property list */
- if ((fcpl = H5Pcreate(H5P_FILE_CREATE)) < 0) {
- error_msg("fail to create a file creation property list\n");
- goto out;
- }
- }
-
- /* set file space strategy and free space threshold */
- if (H5Pset_file_space(fcpl, options->fs_strategy, options->fs_threshold) < 0) {
- error_msg("failed to set file space strategy & threshold \n");
- goto out;
- }
-
- /*-------------------------------------------------------------------------
- * create the output file
- *-------------------------------------------------------------------------
- */
- if (options->verbose)
- printf("Making file <%s>...\n", fnameout);
-
- if ((fidout = H5Fcreate(fnameout, H5F_ACC_TRUNC, fcpl, fapl)) < 0) {
- error_msg("<%s>: Could not create file\n", fnameout);
- goto out;
- }
-
- /*-------------------------------------------------------------------------
- * write a new user block if requested
- *-------------------------------------------------------------------------
- */
- if (options->ublock_size > 0) {
- if (copy_user_block(options->ublock_filename, fnameout,
- options->ublock_size) < 0) {
- error_msg("Could not copy user block. Exiting...\n");
- goto out;
-
- }
- }
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
+ }
+ }
+
+ /* set user block size */
+ if (H5Pset_userblock(fcpl, options->ublock_size) < 0) {
+ error_msg("failed to set userblock size\n");
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
+ }
+ }
+
+ /*-------------------------------------------------------------------------
+ * set alignment options
+ *-------------------------------------------------------------------------
+ */
+ if (options->alignment > 0) {
+ /* either use the FAPL already created or create a new one */
+ if (fapl == H5P_DEFAULT) {
+ /* create a file access property list */
+ if ((fapl = H5Pcreate(H5P_FILE_ACCESS)) < 0) {
+ error_msg("Could not create file access property list\n");
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
+ }
+ }
+
+ if (H5Pset_alignment(fapl, options->threshold, options->alignment) < 0) {
+ error_msg("failed to set alignment\n");
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
+ }
+ }
+
+ /*-------------------------------------------------------------------------
+ * set metadata block size option
+ *-------------------------------------------------------------------------
+ */
+ if (options->meta_block_size > 0) {
+ /* either use the FAPL already created or create a new one */
+ if (fapl == H5P_DEFAULT) {
+ /* create a file access property list */
+ if ((fapl = H5Pcreate(H5P_FILE_ACCESS)) < 0) {
+ error_msg("Could not create file access property list\n");
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
+ }
+ }
+
+ if (H5Pset_meta_block_size(fapl, options->meta_block_size) < 0) {
+ error_msg("failed to set metadata block size\n");
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
+ }
+ }
+
+ /*-------------------------------------------------------------------------
+ * set free-space strategy options
+ *-------------------------------------------------------------------------
+ */
+
+ /* either use the FCPL already created or create a new one */
+ if (fcpl == H5P_DEFAULT) {
+ /* create a file creation property list */
+ if ((fcpl = H5Pcreate(H5P_FILE_CREATE)) < 0) {
+ error_msg("fail to create a file creation property list\n");
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
+ }
+ }
+
+ /* set file space strategy and free space threshold */
+ if (H5Pset_file_space(fcpl, options->fs_strategy, options->fs_threshold) < 0) {
+ error_msg("failed to set file space strategy & threshold \n");
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
+ }
+
+ /*-------------------------------------------------------------------------
+ * create the output file
+ *-------------------------------------------------------------------------
+ */
+ if (options->verbose)
+ printf("Making file <%s>...\n", fnameout);
+
+ if ((fidout = H5Fcreate(fnameout, H5F_ACC_TRUNC, fcpl, fapl)) < 0) {
+ error_msg("<%s>: Could not create file\n", fnameout);
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
+ }
+
+ /*-------------------------------------------------------------------------
+ * write a new user block if requested
+ *-------------------------------------------------------------------------
+ */
+ if (options->ublock_size > 0) {
+ if (copy_user_block(options->ublock_filename, fnameout,
+ options->ublock_size) < 0) {
+ error_msg("Could not copy user block. Exiting...\n");
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
+ }
+ }
/*-------------------------------------------------------------------------
* get list of objects
@@ -358,7 +358,7 @@ int copy_objects(const char* fnamein, const char* fnameout, pack_opt_t *options)
/* get the list of objects in the file */
if (h5trav_gettable(fidin, travt) < 0)
- goto out;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
/*-------------------------------------------------------------------------
* do the copy
@@ -366,8 +366,8 @@ int copy_objects(const char* fnamein, const char* fnameout, pack_opt_t *options)
*/
if (do_copy_objects(fidin, fidout, travt, options) < 0) {
error_msg("<%s>: Could not copy data to: %s\n", fnamein, fnameout);
- goto out;
- } /* end if */
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
+ } /* end if */
/*-------------------------------------------------------------------------
* do the copy of referenced objects
@@ -377,8 +377,8 @@ int copy_objects(const char* fnamein, const char* fnameout, pack_opt_t *options)
if (do_copy_refobjs(fidin, fidout, travt, options) < 0) {
printf("h5repack: <%s>: Could not copy data to: %s\n", fnamein,
fnameout);
- goto out;
- }
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
+ }
/*-------------------------------------------------------------------------
* close
@@ -406,7 +406,7 @@ int copy_objects(const char* fnamein, const char* fnameout, pack_opt_t *options)
if (ub_size > 0 && options->ublock_size == 0) {
if (copy_user_block(fnamein, fnameout, ub_size) < 0) {
error_msg("Could not copy user block. Exiting...\n");
- goto out;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
}
}
@@ -418,7 +418,7 @@ int copy_objects(const char* fnamein, const char* fnameout, pack_opt_t *options)
*-------------------------------------------------------------------------
*/
-out:
+done:
H5E_BEGIN_TRY
{
H5Pclose(fapl);
@@ -470,8 +470,9 @@ out:
*-----------------------------------------*/
int Get_hyperslab(hid_t dcpl_id, int rank_dset, hsize_t dims_dset[],
- size_t size_datum, hsize_t dims_hslab[], hsize_t * hslab_nbytes_p) {
- int status = 0;
+ size_t size_datum, hsize_t dims_hslab[], hsize_t * hslab_nbytes_p) {
+ int ret_value = 0; /*no need to LEAVE() on ERROR: HERR_INIT(int, SUCCEED) */
+ int status = 0;
int k;
H5D_layout_t dset_layout;
int rank_chunk;
@@ -495,8 +496,8 @@ int Get_hyperslab(hid_t dcpl_id, int rank_dset, hsize_t dims_dset[],
rank_chunk = H5Pget_chunk(dcpl_id, rank_dset, dims_chunk);
if (rank_chunk < 0) {
status = -1;
- goto out;
- }
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
+ }
for (k = rank_dset; k > 0; --k)
size_chunk *= dims_chunk[k - 1];
@@ -560,8 +561,8 @@ int Get_hyperslab(hid_t dcpl_id, int rank_dset, hsize_t dims_dset[],
if (hslab_nbytes <= 0) {
status = -1;
- goto out;
- }
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
+ }
}
}
}
@@ -586,15 +587,15 @@ int Get_hyperslab(hid_t dcpl_id, int rank_dset, hsize_t dims_dset[],
if (hslab_nbytes <= 0) {
status = -1;
- goto out;
- }
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
+ }
}
}
/* pass out the hyperslab size*/
*hslab_nbytes_p = hslab_nbytes;
-out:
+done:
return status;
}
@@ -695,7 +696,8 @@ out:
int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt,
pack_opt_t *options) /* repack options */
{
- hid_t grp_in = -1; /* group ID */
+ int ret_value = 0; /*no need to LEAVE() on ERROR: HERR_INIT(int, SUCCEED) */
+ hid_t grp_in = -1; /* group ID */
hid_t grp_out = -1; /* group ID */
hid_t dset_in = -1; /* read dataset ID */
hid_t dset_out = -1; /* write dataset ID */
@@ -765,22 +767,22 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt,
/* open input group */
if ((grp_in = H5Gopen2(fidin, travt->objs[i].name, H5P_DEFAULT))
< 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Gopen2 failed");
/* get input group creation property list */
if ((gcpl_in = H5Gget_create_plist(grp_in)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Gget_create_plist failed");
/* query and set the group creation properties */
if (H5Pget_link_creation_order(gcpl_in, &crt_order_flags) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pget_link_creation_order failed");
/* set up group creation property list */
if ((gcpl_out = H5Pcreate(H5P_GROUP_CREATE)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pcreate failed");
if (H5Pset_link_creation_order(gcpl_out, crt_order_flags) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pset_link_creation_order failed");
/*-------------------------------------------------------------------------
* the root is a special case, we get an ID for the root group
@@ -789,20 +791,20 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt,
*/
if (HDstrcmp(travt->objs[i].name, "/") == 0) {
if ((grp_out = H5Gopen2(fidout, "/", H5P_DEFAULT)) < 0)
- goto error;
- }
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Gopen2 failed");
+ }
else {
if (options->grp_compact > 0 || options->grp_indexed > 0) {
if (H5Pset_link_phase_change(gcpl_out,
(unsigned) options->grp_compact,
(unsigned) options->grp_indexed) < 0)
- goto error;
- }
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pset_link_phase_change failed");
+ }
if ((grp_out = H5Gcreate2(fidout, travt->objs[i].name,
H5P_DEFAULT, gcpl_out, H5P_DEFAULT)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Gcreate2 failed");
}
@@ -811,16 +813,16 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt,
*-------------------------------------------------------------------------
*/
if (copy_attr(grp_in, grp_out, &named_dt_head, travt, options) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "copy_attr failed");
- if (H5Pclose(gcpl_out) < 0)
- goto error;
- if (H5Pclose(gcpl_in) < 0)
- goto error;
- if (H5Gclose(grp_out) < 0)
- goto error;
- if (H5Gclose(grp_in) < 0)
- goto error;
+ if (H5Pclose(gcpl_out) < 0)
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
+ if (H5Pclose(gcpl_in) < 0)
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
+ if (H5Gclose(grp_out) < 0)
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Gclose failed");
+ if (H5Gclose(grp_in) < 0)
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Gclose failed");
break;
@@ -864,24 +866,24 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt,
/* early detection of references */
if ((dset_in = H5Dopen2(fidin, travt->objs[i].name, H5P_DEFAULT))
< 0)
- goto error;
- if ((ftype_id = H5Dget_type(dset_in)) < 0)
- goto error;
- if (H5T_REFERENCE == H5Tget_class(ftype_id))
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dopen2 failed");
+ if ((ftype_id = H5Dget_type(dset_in)) < 0)
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dget_type failed");
+ if (H5T_REFERENCE == H5Tget_class(ftype_id))
is_ref = 1;
/* Check if the datatype is committed */
if ((is_named = H5Tcommitted(ftype_id)) < 0)
- goto error;
- if (is_named)
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tcommitted failed");
+ if (is_named)
if ((wtype_id = copy_named_datatype(ftype_id, fidout,
&named_dt_head, travt, options)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "copy_named_datatype failed");
if (H5Tclose(ftype_id) < 0)
- goto error;
- if (H5Dclose(dset_in) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed");
+ if (H5Dclose(dset_in) < 0)
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dclose failed");
/*-------------------------------------------------------------------------
* check if we should use H5Ocopy or not
@@ -895,23 +897,23 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt,
int j;
if ((dset_in = H5Dopen2(fidin, travt->objs[i].name, H5P_DEFAULT)) < 0)
- goto error;
- if ((f_space_id = H5Dget_space(dset_in)) < 0)
- goto error;
- if ((ftype_id = H5Dget_type(dset_in)) < 0)
- goto error;
- if ((dcpl_in = H5Dget_create_plist(dset_in)) < 0)
- goto error;
- if ((dcpl_out = H5Pcopy(dcpl_in)) < 0)
- goto error;
- if ((rank = H5Sget_simple_extent_ndims(f_space_id)) < 0)
- goto error;
- HDmemset(dims, 0, sizeof dims);
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dopen2 failed");
+ if ((f_space_id = H5Dget_space(dset_in)) < 0)
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dget_space failed");
+ if ((ftype_id = H5Dget_type(dset_in)) < 0)
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dget_type failed");
+ if ((dcpl_in = H5Dget_create_plist(dset_in)) < 0)
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dget_create_plist failed");
+ if ((dcpl_out = H5Pcopy(dcpl_in)) < 0)
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pcopy failed");
+ if ((rank = H5Sget_simple_extent_ndims(f_space_id)) < 0)
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sget_simple_extent_ndims failed");
+ HDmemset(dims, 0, sizeof dims);
if (H5Sget_simple_extent_dims(f_space_id, dims, NULL) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sget_simple_extent_dims failed");
if (H5Dget_space_status(dset_in, &space_status) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dget_space_status failed");
nelmts = 1;
for (j = 0; j < rank; j++)
@@ -926,7 +928,7 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt,
} /* end if */
if ((msize = H5Tget_size(wtype_id)) == 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tget_size failed");
/* size of current dset */
size_dset = nelmts * msize;
@@ -965,8 +967,8 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt,
if (apply_s) {
if (apply_filters(travt->objs[i].name, rank, dims,
msize, dcpl_out, options, &has_filter) < 0)
- goto error;
- }
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "apply_filters failed");
+ }
/* only if layout change requested for entire file or
* individual obj */
@@ -1009,16 +1011,14 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt,
* modified dcpl; in that case use the original instead
*-------------------------------------------------------------------------
*/
- H5E_BEGIN_TRY
- {
- dset_out = H5Dcreate2(fidout,
+ dset_out = H5Dcreate2(fidout,
travt->objs[i].name, wtype_id,
f_space_id, H5P_DEFAULT, dcpl_out,
H5P_DEFAULT);
- }H5E_END_TRY;
if (dset_out == FAIL) {
- if (options->verbose)
+ HERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dcreate2 failed");
+ if (options->verbose)
printf(
" warning: could not create dataset <%s>. Applying original settings\n",
travt->objs[i].name);
@@ -1026,8 +1026,8 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt,
if ((dset_out = H5Dcreate2(fidout,
travt->objs[i].name, wtype_id, f_space_id,
H5P_DEFAULT, dcpl_in, H5P_DEFAULT)) < 0)
- goto error;
- apply_f = 0;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dcreate2 failed");
+ apply_f = 0;
}
/*-------------------------------------------------------------------------
@@ -1053,8 +1053,8 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt,
if (TRUE == H5Tdetect_class(wtype_id, H5T_VLEN))
if (H5Dvlen_reclaim(wtype_id, f_space_id,
H5P_DEFAULT, buf) < 0)
- goto error;
- }
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dvlen_reclaim failed");
+ }
else { /* possibly not enough memory, read/write by hyperslabs */
size_t p_type_nbytes = msize; /*size of memory type */
hsize_t p_nelmts = nelmts; /*total elements */
@@ -1096,7 +1096,7 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt,
if (Get_hyperslab(dcpl_tmp, rank, dims,
p_type_nbytes, hslab_dims,
&hslab_nbytes) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "Get_hyperslab failed");
hslab_buf = HDmalloc((size_t)hslab_nbytes);
@@ -1126,12 +1126,12 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt,
if (H5Sselect_hyperslab(f_space_id,
H5S_SELECT_SET, hs_sel_offset,
NULL, hs_sel_count, NULL) < 0)
- goto error;
- if (H5Sselect_hyperslab(hslab_space,
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sselect_hyperslab failed");
+ if (H5Sselect_hyperslab(hslab_space,
H5S_SELECT_SET, zero, NULL,
&hs_select_nelmts, NULL) < 0)
- goto error;
- }
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sselect_hyperslab failed");
+ }
else {
H5Sselect_all(f_space_id);
H5Sselect_all(hslab_space);
@@ -1219,10 +1219,10 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt,
*/
if (copy_attr(dset_in, dset_out, &named_dt_head, travt,
options) < 0)
- goto error;
- /*close */
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "copy_attr failed");
+ /*close */
if (H5Dclose(dset_out) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dclose failed");
}/*!H5T_REFERENCE*/
}/*h5tools_canreadf*/
@@ -1232,17 +1232,17 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt,
*-------------------------------------------------------------------------
*/
if (H5Tclose(ftype_id) < 0)
- goto error;
- if (H5Tclose(wtype_id) < 0)
- goto error;
- if (H5Pclose(dcpl_in) < 0)
- goto error;
- if (H5Pclose(dcpl_out) < 0)
- goto error;
- if (H5Sclose(f_space_id) < 0)
- goto error;
- if (H5Dclose(dset_in) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed");
+ if (H5Tclose(wtype_id) < 0)
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed");
+ if (H5Pclose(dcpl_in) < 0)
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
+ if (H5Pclose(dcpl_out) < 0)
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
+ if (H5Sclose(f_space_id) < 0)
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sclose failed");
+ if (H5Dclose(dset_in) < 0)
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dclose failed");
}
/*-------------------------------------------------------------------------
@@ -1254,11 +1254,11 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt,
/* create property to pass copy options */
if ((pid = H5Pcreate(H5P_OBJECT_COPY)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pcreate failed");
/* set options for object copy */
if (H5Pset_copy_object(pid, H5O_COPY_WITHOUT_ATTR_FLAG) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pset_copy_object failed");
/*-------------------------------------------------------------------------
* do the copy
@@ -1271,11 +1271,11 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt,
travt->objs[i].name, /* Name of the destination object */
pid, /* Properties which apply to the copy */
H5P_DEFAULT) < 0) /* Properties which apply to the new hard link */
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Ocopy failed");
/* close property */
if (H5Pclose(pid) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
/*-------------------------------------------------------------------------
* copy attrs manually
@@ -1283,17 +1283,15 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt,
*/
if ((dset_in = H5Dopen2(fidin, travt->objs[i].name, H5P_DEFAULT))
< 0)
- goto error;
- if ((dset_out = H5Dopen2(fidout, travt->objs[i].name,
- H5P_DEFAULT)) < 0)
- goto error;
- if (copy_attr(dset_in, dset_out, &named_dt_head, travt, options)
- < 0)
- goto error;
- if (H5Dclose(dset_in) < 0)
- goto error;
- if (H5Dclose(dset_out) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dopen2 failed");
+ if ((dset_out = H5Dopen2(fidout, travt->objs[i].name, H5P_DEFAULT)) < 0)
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dopen2 failed");
+ if (copy_attr(dset_in, dset_out, &named_dt_head, travt, options) < 0)
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "copy_attr failed");
+ if (H5Dclose(dset_in) < 0)
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dclose failed");
+ if (H5Dclose(dset_out) < 0)
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dclose failed");
if (options->verbose)
printf(FORMAT_OBJ, "dset", travt->objs[i].name);
@@ -1311,32 +1309,30 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt,
if (options->verbose)
printf(FORMAT_OBJ, "type", travt->objs[i].name);
- if ((type_in = H5Topen2(fidin, travt->objs[i].name, H5P_DEFAULT))
- < 0)
- goto error;
+ if ((type_in = H5Topen2(fidin, travt->objs[i].name, H5P_DEFAULT)) < 0)
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Topen2 failed");
/* Copy the datatype anonymously */
if ((type_out = copy_named_datatype(type_in, fidout, &named_dt_head,
travt, options)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "copy_named_datatype failed");
/* Link in to group structure */
if (H5Lcreate_hard(type_out, ".", fidout, travt->objs[i].name,
H5P_DEFAULT, H5P_DEFAULT) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Lcreate_hard failed");
/*-------------------------------------------------------------------------
* copy attrs
*-------------------------------------------------------------------------
*/
- if (copy_attr(type_in, type_out, &named_dt_head, travt, options)
- < 0)
- goto error;
+ if (copy_attr(type_in, type_out, &named_dt_head, travt, options) < 0)
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "copy_attr failed");
if (H5Tclose(type_in) < 0)
- goto error;
- if (H5Tclose(type_out) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed");
+ if (H5Tclose(type_out) < 0)
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed");
break;
@@ -1356,8 +1352,8 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt,
printf(FORMAT_OBJ, "link", travt->objs[i].name);
if (H5Lcopy(fidin, travt->objs[i].name, fidout, travt->objs[i].name,
- H5P_DEFAULT, H5P_DEFAULT) < 0)
- goto error;
+ H5P_DEFAULT, H5P_DEFAULT) < 0)
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Lcopy failed");
if (options->verbose)
printf(FORMAT_OBJ, "link", travt->objs[i].name);
@@ -1366,8 +1362,8 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt,
break;
default:
- goto error;
- } /* switch */
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "Object type not found");
+ } /* switch */
/* free */
if (buf != NULL) {
@@ -1382,7 +1378,7 @@ int do_copy_objects(hid_t fidin, hid_t fidout, trav_table_t *travt,
return 0;
-error:
+done:
H5E_BEGIN_TRY
{
H5Gclose(grp_in);
@@ -1526,8 +1522,9 @@ static void print_dataset_info(hid_t dcpl_id, char *objname, double ratio,
*-------------------------------------------------------------------------
*/
static int copy_user_block(const char *infile, const char *outfile,
- hsize_t size) {
- int infid = -1, outfid = -1; /* File descriptors */
+ hsize_t size) {
+ int ret_value = 0; /*no need to LEAVE() on ERROR: HERR_INIT(int, SUCCEED) */
+ int infid = -1, outfid = -1; /* File descriptors */
int status = 0; /* Return value */
/* User block must be any power of 2 equal to 512 or greater (512, 1024, 2048, etc.) */
@@ -1536,12 +1533,12 @@ static int copy_user_block(const char *infile, const char *outfile,
/* Open files */
if ((infid = HDopen(infile, O_RDONLY, 0)) < 0) {
status = -1;
- goto done;
- }
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "HDopen failed");
+ }
if ((outfid = HDopen(outfile, O_WRONLY, 0644)) < 0) {
status = -1;
- goto done;
- }
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "HDopen failed");
+ }
/* Copy the userblock from the input file to the output file */
while (size > 0) {
@@ -1556,8 +1553,8 @@ static int copy_user_block(const char *infile, const char *outfile,
nread = HDread(infid, rbuf, (size_t)size);
if (nread < 0) {
status = -1;
- goto done;
- } /* end if */
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "HDread failed");
+ } /* end if */
/* Write buffer to destination file */
/* (compensating for interrupted writes & checking for errors, etc.) */
@@ -1571,8 +1568,8 @@ static int copy_user_block(const char *infile, const char *outfile,
} while (-1 == nwritten && EINTR == errno);
if (-1 == nwritten) { /* error */
status = -1;
- goto done;
- } /* end if */
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "HDwrite failed");
+ } /* end if */
HDassert(nwritten > 0);
HDassert(nwritten <= nbytes);
@@ -1612,7 +1609,8 @@ done:
static
void print_user_block(const char *filename, hid_t fid)
{
- int fh; /* file handle */
+ int ret_value = 0; /*no need to LEAVE() on ERROR: HERR_INIT(int, SUCCEED) */
+ int fh; /* file handle */
hsize_t ub_size; /* user block size */
hsize_t size; /* size read */
hid_t fcpl; /* file creation property list ID for HDF5 file */
@@ -1621,23 +1619,23 @@ void print_user_block(const char *filename, hid_t fid)
/* get user block size */
if(( fcpl = H5Fget_create_plist(fid)) < 0) {
error_msg("failed to retrieve file creation property list\n");
- goto done;
- }
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Fget_create_plist failed");
+ }
if(H5Pget_userblock(fcpl, &ub_size) < 0) {
error_msg("failed to retrieve userblock size\n");
- goto done;
- }
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pget_userblock failed");
+ }
if(H5Pclose(fcpl) < 0) {
error_msg("failed to close property list\n");
- goto done;
- }
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
+ }
/* open file */
if((fh = HDopen(filename, O_RDONLY, 0)) < 0) {
- goto done;
- }
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "HDopen failed");
+ }
size = ub_size;
@@ -1660,8 +1658,8 @@ void print_user_block(const char *filename, hid_t fid)
printf("\n");
if(nread < 0) {
- goto done;
- }
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "nread < 0");
+ }
/* update size of userblock left to transfer */
size -= nread;
diff --git a/tools/h5repack/h5repack_main.c b/tools/h5repack/h5repack_main.c
index c03b7a7..7745860 100644
--- a/tools/h5repack/h5repack_main.c
+++ b/tools/h5repack/h5repack_main.c
@@ -33,30 +33,31 @@ const char *outfile = NULL;
* Command-line options: The user can specify short or long-named
* parameters.
*/
-static const char *s_opts = "hVvf:l:m:e:nLc:d:s:u:b:M:t:a:i:o:S:T:";
+static const char *s_opts = "hVvf:l:m:e:nLc:d:s:u:b:M:t:a:i:o:S:T:E";
static struct long_options l_opts[] = {
- { "help", no_arg, 'h' },
- { "version", no_arg, 'V' },
- { "verbose", no_arg, 'v' },
- { "filter", require_arg, 'f' },
- { "layout", require_arg, 'l' },
- { "minimum", require_arg, 'm' },
- { "file", require_arg, 'e' },
- { "native", no_arg, 'n' },
- { "latest", no_arg, 'L' },
- { "compact", require_arg, 'c' },
- { "indexed", require_arg, 'd' },
- { "ssize", require_arg, 's' },
- { "ublock", require_arg, 'u' },
- { "block", require_arg, 'b' },
- { "metadata_block_size", require_arg, 'M' },
- { "threshold", require_arg, 't' },
- { "alignment", require_arg, 'a' },
- { "infile", require_arg, 'i' }, /* -i for backward compability */
- { "outfile", require_arg, 'o' }, /* -o for backward compability */
- { "fs_strategy", require_arg, 'S' },
- { "fs_threshold", require_arg, 'T' },
- { NULL, 0, '\0' }
+ { "help", no_arg, 'h' },
+ { "version", no_arg, 'V' },
+ { "verbose", no_arg, 'v' },
+ { "filter", require_arg, 'f' },
+ { "layout", require_arg, 'l' },
+ { "minimum", require_arg, 'm' },
+ { "file", require_arg, 'e' },
+ { "native", no_arg, 'n' },
+ { "latest", no_arg, 'L' },
+ { "compact", require_arg, 'c' },
+ { "indexed", require_arg, 'd' },
+ { "ssize", require_arg, 's' },
+ { "ublock", require_arg, 'u' },
+ { "block", require_arg, 'b' },
+ { "metadata_block_size", require_arg, 'M' },
+ { "threshold", require_arg, 't' },
+ { "alignment", require_arg, 'a' },
+ { "infile", require_arg, 'i' }, /* -i for backward compability */
+ { "outfile", require_arg, 'o' }, /* -o for backward compability */
+ { "fs_strategy", require_arg, 'S' },
+ { "fs_threshold", require_arg, 'T' },
+ { "enable-error-stack", no_arg, 'E' },
+ { NULL, 0, '\0' }
};
/*-------------------------------------------------------------------------
@@ -69,128 +70,132 @@ static struct long_options l_opts[] = {
*-------------------------------------------------------------------------
*/
static void usage(const char *prog) {
- printf("usage: %s [OPTIONS] file1 file2\n", prog);
- printf(" file1 Input HDF5 File\n");
- printf(" file2 Output HDF5 File\n");
- printf(" OPTIONS\n");
- printf(" -h, --help Print a usage message and exit\n");
- printf(" -v, --verbose Verbose mode, print object information\n");
- printf(" -V, --version Print version number and exit\n");
- printf(" -n, --native Use a native HDF5 type when repacking\n");
- printf(" -L, --latest Use latest version of file format\n");
- printf(" -c L1, --compact=L1 Maximum number of links in header messages\n");
- printf(" -d L2, --indexed=L2 Minimum number of links in the indexed format\n");
- printf(" -s S[:F], --ssize=S[:F] Shared object header message minimum size\n");
- printf(" -m M, --minimum=M Do not apply the filter to datasets smaller than M\n");
- printf(" -e E, --file=E Name of file E with the -f and -l options\n");
- printf(" -u U, --ublock=U Name of file U with user block data to be added\n");
- printf(" -b B, --block=B Size of user block to be added\n");
- printf(" -M A, --metadata_block_size=A Metadata block size for H5Pset_meta_block_size\n");
- printf(" -t T, --threshold=T Threshold value for H5Pset_alignment\n");
- printf(" -a A, --alignment=A Alignment value for H5Pset_alignment\n");
- printf(" -f FILT, --filter=FILT Filter type\n");
- printf(" -l LAYT, --layout=LAYT Layout type\n");
- printf(" -S FS_STRGY, --fs_strategy=FS_STRGY File space management strategy\n");
- printf(" -T FS_THRD, --fs_threshold=FS_THRD Free-space section threshold\n");
- printf("\n");
- printf(" M - is an integer greater than 1, size of dataset in bytes (default is 0) \n");
- printf(" E - is a filename.\n");
- printf(" S - is an integer\n");
- printf(" U - is a filename.\n");
- printf(" T - is an integer\n");
- printf(" A - is an integer greater than zero\n");
- printf(" B - is the user block size, any value that is 512 or greater and is\n");
- printf(" a power of 2 (1024 default)\n");
- printf(" F - is the shared object header message type, any of <dspace|dtype|fill|\n");
- printf(" pline|attr>. If F is not specified, S applies to all messages\n");
- printf("\n");
- printf(" FS_STRGY is the file space management strategy to use for the output file.\n");
- printf(" It is a string as listed below:\n");
- printf(" ALL_PERSIST - Use persistent free-space managers, aggregators and virtual file driver\n");
- printf(" for file space allocation\n");
- printf(" ALL - Use non-persistent free-space managers, aggregators and virtual file driver\n");
- printf(" for file space allocation\n");
- printf(" AGGR_VFD - Use aggregators and virtual file driver for file space allocation\n");
- printf(" VFD - Use virtual file driver for file space allocation\n");
- printf("\n");
- printf(" FS_THRD is the free-space section threshold to use for the output file.\n");
- printf(" It is the minimum size (in bytes) of free-space sections to be tracked\n");
- printf(" by the the library's free-space managers.\n");
- printf("\n");
- printf(" FILT - is a string with the format:\n");
- printf("\n");
- printf(" <list of objects>:<name of filter>=<filter parameters>\n");
- printf("\n");
- printf(" <list of objects> is a comma separated list of object names, meaning apply\n");
- printf(" compression only to those objects. If no names are specified, the filter\n");
- printf(" is applied to all objects\n");
- printf(" <name of filter> can be:\n");
- printf(" GZIP, to apply the HDF5 GZIP filter (GZIP compression)\n");
- printf(" SZIP, to apply the HDF5 SZIP filter (SZIP compression)\n");
- printf(" SHUF, to apply the HDF5 shuffle filter\n");
- printf(" FLET, to apply the HDF5 checksum filter\n");
- printf(" NBIT, to apply the HDF5 NBIT filter (NBIT compression)\n");
- printf(" SOFF, to apply the HDF5 Scale/Offset filter\n");
- printf(" UD, to apply a user defined filter\n");
- printf(" NONE, to remove all filters\n");
- printf(" <filter parameters> is optional filter parameter information\n");
- printf(" GZIP=<deflation level> from 1-9\n");
- printf(" SZIP=<pixels per block,coding> pixels per block is a even number in\n");
- printf(" 2-32 and coding method is either EC or NN\n");
- printf(" SHUF (no parameter)\n");
- printf(" FLET (no parameter)\n");
- printf(" NBIT (no parameter)\n");
- printf(" SOFF=<scale_factor,scale_type> scale_factor is an integer and scale_type\n");
- printf(" is either IN or DS\n");
- printf(" UD=<filter_number,cd_value_count,value_1[,value_2,...,value_N]>\n");
- printf(" required values for filter_number,cd_value_count,value_1\n");
- printf(" optional values for value_2 to value_N\n");
- printf(" NONE (no parameter)\n");
- printf("\n");
- printf(" LAYT - is a string with the format:\n");
- printf("\n");
- printf(" <list of objects>:<layout type>=<layout parameters>\n");
- printf("\n");
- printf(" <list of objects> is a comma separated list of object names, meaning that\n");
- printf(" layout information is supplied for those objects. If no names are\n");
- printf(" specified, the layout type is applied to all objects\n");
- printf(" <layout type> can be:\n");
- printf(" CHUNK, to apply chunking layout\n");
- printf(" COMPA, to apply compact layout\n");
- printf(" CONTI, to apply contiguous layout\n");
- printf(" <layout parameters> is optional layout information\n");
- printf(" CHUNK=DIM[xDIM...xDIM], the chunk size of each dimension\n");
- printf(" COMPA (no parameter)\n");
- printf(" CONTI (no parameter)\n");
- printf("\n");
- printf("Examples of use:\n");
- printf("\n");
- printf("1) h5repack -v -f GZIP=1 file1 file2\n");
- printf("\n");
- printf(" GZIP compression with level 1 to all objects\n");
- printf("\n");
- printf("2) h5repack -v -f dset1:SZIP=8,NN file1 file2\n");
- printf("\n");
- printf(" SZIP compression with 8 pixels per block and NN coding method to object dset1\n");
- printf("\n");
- printf("3) h5repack -v -l dset1,dset2:CHUNK=20x10 -f dset3,dset4,dset5:NONE file1 file2\n");
- printf("\n");
- printf(" Chunked layout, with a layout size of 20x10, to objects dset1 and dset2\n");
- printf(" and remove filters to objects dset3, dset4, dset5\n");
- printf("\n");
- printf("4) h5repack -L -c 10 -s 20:dtype file1 file2 \n");
- printf("\n");
- printf(" Using latest file format with maximum compact group size of 10 and\n");
- printf(" and minimum shared datatype size of 20\n");
- printf("\n");
- printf("5) h5repack -f SHUF -f GZIP=1 file1 file2 \n");
- printf("\n");
- printf(" Add both filters SHUF and GZIP in this order to all datasets\n");
- printf("\n");
- printf("6) h5repack -f UD=307,1,9 file1 file2 \n");
- printf("\n");
- printf(" Add bzip2 filter to all datasets\n");
- printf("\n");
+ FLUSHSTREAM(rawoutstream);
+ PRINTSTREAM(rawoutstream, "usage: %s [OPTIONS] file1 file2\n", prog);
+ PRINTVALSTREAM(rawoutstream, " file1 Input HDF5 File\n");
+ PRINTVALSTREAM(rawoutstream, " file2 Output HDF5 File\n");
+ PRINTVALSTREAM(rawoutstream, " OPTIONS\n");
+ PRINTVALSTREAM(rawoutstream, " -h, --help Print a usage message and exit\n");
+ PRINTVALSTREAM(rawoutstream, " -v, --verbose Verbose mode, print object information\n");
+ PRINTVALSTREAM(rawoutstream, " -V, --version Print version number and exit\n");
+ PRINTVALSTREAM(rawoutstream, " -n, --native Use a native HDF5 type when repacking\n");
+ PRINTVALSTREAM(rawoutstream, " -L, --latest Use latest version of file format\n");
+ PRINTVALSTREAM(rawoutstream, " -c L1, --compact=L1 Maximum number of links in header messages\n");
+ PRINTVALSTREAM(rawoutstream, " -d L2, --indexed=L2 Minimum number of links in the indexed format\n");
+ PRINTVALSTREAM(rawoutstream, " -s S[:F], --ssize=S[:F] Shared object header message minimum size\n");
+ PRINTVALSTREAM(rawoutstream, " -m M, --minimum=M Do not apply the filter to datasets smaller than M\n");
+ PRINTVALSTREAM(rawoutstream, " -e E, --file=E Name of file E with the -f and -l options\n");
+ PRINTVALSTREAM(rawoutstream, " -u U, --ublock=U Name of file U with user block data to be added\n");
+ PRINTVALSTREAM(rawoutstream, " -b B, --block=B Size of user block to be added\n");
+ PRINTVALSTREAM(rawoutstream, " -M A, --metadata_block_size=A Metadata block size for H5Pset_meta_block_size\n");
+ PRINTVALSTREAM(rawoutstream, " -t T, --threshold=T Threshold value for H5Pset_alignment\n");
+ PRINTVALSTREAM(rawoutstream, " -a A, --alignment=A Alignment value for H5Pset_alignment\n");
+ PRINTVALSTREAM(rawoutstream, " -f FILT, --filter=FILT Filter type\n");
+ PRINTVALSTREAM(rawoutstream, " -l LAYT, --layout=LAYT Layout type\n");
+ PRINTVALSTREAM(rawoutstream, " -S FS_STRGY, --fs_strategy=FS_STRGY File space management strategy\n");
+ PRINTVALSTREAM(rawoutstream, " -T FS_THRD, --fs_threshold=FS_THRD Free-space section threshold\n");
+ PRINTVALSTREAM(rawoutstream, "\n");
+ PRINTVALSTREAM(rawoutstream, " M - is an integer greater than 1, size of dataset in bytes (default is 0) \n");
+ PRINTVALSTREAM(rawoutstream, " E - is a filename.\n");
+ PRINTVALSTREAM(rawoutstream, " S - is an integer\n");
+ PRINTVALSTREAM(rawoutstream, " U - is a filename.\n");
+ PRINTVALSTREAM(rawoutstream, " T - is an integer\n");
+ PRINTVALSTREAM(rawoutstream, " A - is an integer greater than zero\n");
+ PRINTVALSTREAM(rawoutstream, " B - is the user block size, any value that is 512 or greater and is\n");
+ PRINTVALSTREAM(rawoutstream, " a power of 2 (1024 default)\n");
+ PRINTVALSTREAM(rawoutstream, " F - is the shared object header message type, any of <dspace|dtype|fill|\n");
+ PRINTVALSTREAM(rawoutstream, " pline|attr>. If F is not specified, S applies to all messages\n");
+ PRINTVALSTREAM(rawoutstream, "\n");
+ PRINTVALSTREAM(rawoutstream, " --enable-error-stack Prints messages from the HDF5 error stack as they\n");
+ PRINTVALSTREAM(rawoutstream, " occur.\n");
+ PRINTVALSTREAM(rawoutstream, "\n");
+ PRINTVALSTREAM(rawoutstream, " FS_STRGY is the file space management strategy to use for the output file.\n");
+ PRINTVALSTREAM(rawoutstream, " It is a string as listed below:\n");
+ PRINTVALSTREAM(rawoutstream, " ALL_PERSIST - Use persistent free-space managers, aggregators and virtual file driver\n");
+ PRINTVALSTREAM(rawoutstream, " for file space allocation\n");
+ PRINTVALSTREAM(rawoutstream, " ALL - Use non-persistent free-space managers, aggregators and virtual file driver\n");
+ PRINTVALSTREAM(rawoutstream, " for file space allocation\n");
+ PRINTVALSTREAM(rawoutstream, " AGGR_VFD - Use aggregators and virtual file driver for file space allocation\n");
+ PRINTVALSTREAM(rawoutstream, " VFD - Use virtual file driver for file space allocation\n");
+ PRINTVALSTREAM(rawoutstream, "\n");
+ PRINTVALSTREAM(rawoutstream, " FS_THRD is the free-space section threshold to use for the output file.\n");
+ PRINTVALSTREAM(rawoutstream, " It is the minimum size (in bytes) of free-space sections to be tracked\n");
+ PRINTVALSTREAM(rawoutstream, " by the the library's free-space managers.\n");
+ PRINTVALSTREAM(rawoutstream, "\n");
+ PRINTVALSTREAM(rawoutstream, " FILT - is a string with the format:\n");
+ PRINTVALSTREAM(rawoutstream, "\n");
+ PRINTVALSTREAM(rawoutstream, " <list of objects>:<name of filter>=<filter parameters>\n");
+ PRINTVALSTREAM(rawoutstream, "\n");
+ PRINTVALSTREAM(rawoutstream, " <list of objects> is a comma separated list of object names, meaning apply\n");
+ PRINTVALSTREAM(rawoutstream, " compression only to those objects. If no names are specified, the filter\n");
+ PRINTVALSTREAM(rawoutstream, " is applied to all objects\n");
+ PRINTVALSTREAM(rawoutstream, " <name of filter> can be:\n");
+ PRINTVALSTREAM(rawoutstream, " GZIP, to apply the HDF5 GZIP filter (GZIP compression)\n");
+ PRINTVALSTREAM(rawoutstream, " SZIP, to apply the HDF5 SZIP filter (SZIP compression)\n");
+ PRINTVALSTREAM(rawoutstream, " SHUF, to apply the HDF5 shuffle filter\n");
+ PRINTVALSTREAM(rawoutstream, " FLET, to apply the HDF5 checksum filter\n");
+ PRINTVALSTREAM(rawoutstream, " NBIT, to apply the HDF5 NBIT filter (NBIT compression)\n");
+ PRINTVALSTREAM(rawoutstream, " SOFF, to apply the HDF5 Scale/Offset filter\n");
+ PRINTVALSTREAM(rawoutstream, " UD, to apply a user defined filter\n");
+ PRINTVALSTREAM(rawoutstream, " NONE, to remove all filters\n");
+ PRINTVALSTREAM(rawoutstream, " <filter parameters> is optional filter parameter information\n");
+ PRINTVALSTREAM(rawoutstream, " GZIP=<deflation level> from 1-9\n");
+ PRINTVALSTREAM(rawoutstream, " SZIP=<pixels per block,coding> pixels per block is a even number in\n");
+ PRINTVALSTREAM(rawoutstream, " 2-32 and coding method is either EC or NN\n");
+ PRINTVALSTREAM(rawoutstream, " SHUF (no parameter)\n");
+ PRINTVALSTREAM(rawoutstream, " FLET (no parameter)\n");
+ PRINTVALSTREAM(rawoutstream, " NBIT (no parameter)\n");
+ PRINTVALSTREAM(rawoutstream, " SOFF=<scale_factor,scale_type> scale_factor is an integer and scale_type\n");
+ PRINTVALSTREAM(rawoutstream, " is either IN or DS\n");
+ PRINTVALSTREAM(rawoutstream, " UD=<filter_number,cd_value_count,value_1[,value_2,...,value_N]>\n");
+ PRINTVALSTREAM(rawoutstream, " required values for filter_number,cd_value_count,value_1\n");
+ PRINTVALSTREAM(rawoutstream, " optional values for value_2 to value_N\n");
+ PRINTVALSTREAM(rawoutstream, " NONE (no parameter)\n");
+ PRINTVALSTREAM(rawoutstream, "\n");
+ PRINTVALSTREAM(rawoutstream, " LAYT - is a string with the format:\n");
+ PRINTVALSTREAM(rawoutstream, "\n");
+ PRINTVALSTREAM(rawoutstream, " <list of objects>:<layout type>=<layout parameters>\n");
+ PRINTVALSTREAM(rawoutstream, "\n");
+ PRINTVALSTREAM(rawoutstream, " <list of objects> is a comma separated list of object names, meaning that\n");
+ PRINTVALSTREAM(rawoutstream, " layout information is supplied for those objects. If no names are\n");
+ PRINTVALSTREAM(rawoutstream, " specified, the layout type is applied to all objects\n");
+ PRINTVALSTREAM(rawoutstream, " <layout type> can be:\n");
+ PRINTVALSTREAM(rawoutstream, " CHUNK, to apply chunking layout\n");
+ PRINTVALSTREAM(rawoutstream, " COMPA, to apply compact layout\n");
+ PRINTVALSTREAM(rawoutstream, " CONTI, to apply contiguous layout\n");
+ PRINTVALSTREAM(rawoutstream, " <layout parameters> is optional layout information\n");
+ PRINTVALSTREAM(rawoutstream, " CHUNK=DIM[xDIM...xDIM], the chunk size of each dimension\n");
+ PRINTVALSTREAM(rawoutstream, " COMPA (no parameter)\n");
+ PRINTVALSTREAM(rawoutstream, " CONTI (no parameter)\n");
+ PRINTVALSTREAM(rawoutstream, "\n");
+ PRINTVALSTREAM(rawoutstream, "Examples of use:\n");
+ PRINTVALSTREAM(rawoutstream, "\n");
+ PRINTVALSTREAM(rawoutstream, "1) h5repack -v -f GZIP=1 file1 file2\n");
+ PRINTVALSTREAM(rawoutstream, "\n");
+ PRINTVALSTREAM(rawoutstream, " GZIP compression with level 1 to all objects\n");
+ PRINTVALSTREAM(rawoutstream, "\n");
+ PRINTVALSTREAM(rawoutstream, "2) h5repack -v -f dset1:SZIP=8,NN file1 file2\n");
+ PRINTVALSTREAM(rawoutstream, "\n");
+ PRINTVALSTREAM(rawoutstream, " SZIP compression with 8 pixels per block and NN coding method to object dset1\n");
+ PRINTVALSTREAM(rawoutstream, "\n");
+ PRINTVALSTREAM(rawoutstream, "3) h5repack -v -l dset1,dset2:CHUNK=20x10 -f dset3,dset4,dset5:NONE file1 file2\n");
+ PRINTVALSTREAM(rawoutstream, "\n");
+ PRINTVALSTREAM(rawoutstream, " Chunked layout, with a layout size of 20x10, to objects dset1 and dset2\n");
+ PRINTVALSTREAM(rawoutstream, " and remove filters to objects dset3, dset4, dset5\n");
+ PRINTVALSTREAM(rawoutstream, "\n");
+ PRINTVALSTREAM(rawoutstream, "4) h5repack -L -c 10 -s 20:dtype file1 file2 \n");
+ PRINTVALSTREAM(rawoutstream, "\n");
+ PRINTVALSTREAM(rawoutstream, " Using latest file format with maximum compact group size of 10 and\n");
+ PRINTVALSTREAM(rawoutstream, " and minimum shared datatype size of 20\n");
+ PRINTVALSTREAM(rawoutstream, "\n");
+ PRINTVALSTREAM(rawoutstream, "5) h5repack -f SHUF -f GZIP=1 file1 file2 \n");
+ PRINTVALSTREAM(rawoutstream, "\n");
+ PRINTVALSTREAM(rawoutstream, " Add both filters SHUF and GZIP in this order to all datasets\n");
+ PRINTVALSTREAM(rawoutstream, "\n");
+ PRINTVALSTREAM(rawoutstream, "6) h5repack -f UD=307,1,9 file1 file2 \n");
+ PRINTVALSTREAM(rawoutstream, "\n");
+ PRINTVALSTREAM(rawoutstream, " Add bzip2 filter to all datasets\n");
+ PRINTVALSTREAM(rawoutstream, "\n");
}
/*-------------------------------------------------------------------------
@@ -525,13 +530,17 @@ int parse_command_line(int argc, const char **argv, pack_opt_t* options) {
options->fs_threshold = (hsize_t) HDatol( opt_arg );
break;
- default:
- break;
- } /* switch */
+ case 'E':
+ enable_error_stack = TRUE;
+ break;
+
+ default:
+ break;
+ } /* switch */
- } /* while */
+ } /* while */
- if (has_i_o == 0) {
+ if (has_i_o == 0) {
/* check for file names to be processed */
if (argc <= opt_ind || argv[opt_ind + 1] == NULL) {
error_msg("missing file names\n");
@@ -563,50 +572,67 @@ done:
*-------------------------------------------------------------------------
*/
int main(int argc, const char **argv) {
+ H5E_auto2_t func;
+ H5E_auto2_t tools_func;
+ void *edata;
+ void *tools_edata;
pack_opt_t options; /*the global options */
h5tools_setprogname(PROGRAMNAME);
h5tools_setstatus(EXIT_SUCCESS);
- /* Initialize h5tools lib */
- h5tools_init();
-
- /* update hyperslab buffer size from H5TOOLS_BUFSIZE env if exist */
- if (h5tools_getenv_update_hyperslab_bufsize() < 0) {
- h5tools_setstatus(EXIT_FAILURE);
- goto done;
- }
-
- /* initialize options */
- h5repack_init(&options, 0, FALSE, H5F_FILE_SPACE_DEFAULT, (hsize_t) 0);
-
- if (parse_command_line(argc, argv, &options) < 0)
- goto done;
-
- /* get file names if they were not yet got */
- if (has_i_o == 0) {
-
- if (argv[opt_ind] != NULL && argv[opt_ind + 1] != NULL) {
- infile = argv[opt_ind];
- outfile = argv[opt_ind + 1];
-
- if ( HDstrcmp( infile, outfile ) == 0) {
- error_msg("file names cannot be the same\n");
- usage(h5tools_getprogname());
- h5tools_setstatus(EXIT_FAILURE);
- goto done;
- }
- }
- else {
- error_msg("file names missing\n");
- usage(h5tools_getprogname());
- h5tools_setstatus(EXIT_FAILURE);
- goto done;
- }
- }
-
- /* pack it */
+ /* Disable error reporting */
+ H5Eget_auto2(H5E_DEFAULT, &func, &edata);
+ H5Eset_auto2(H5E_DEFAULT, NULL, NULL);
+
+ /* Initialize h5tools lib */
+ h5tools_init();
+
+ /* Disable tools error reporting */
+ H5Eget_auto2(H5tools_ERR_STACK_g, &tools_func, &tools_edata);
+ H5Eset_auto2(H5tools_ERR_STACK_g, NULL, NULL);
+
+ /* update hyperslab buffer size from H5TOOLS_BUFSIZE env if exist */
+ if (h5tools_getenv_update_hyperslab_bufsize() < 0) {
+ h5tools_setstatus(EXIT_FAILURE);
+ goto done;
+ }
+
+ /* initialize options */
+ h5repack_init(&options, 0, FALSE, H5F_FILE_SPACE_DEFAULT, (hsize_t) 0);
+
+ if (parse_command_line(argc, argv, &options) < 0)
+ goto done;
+
+ /* get file names if they were not yet got */
+ if (has_i_o == 0) {
+
+ if (argv[opt_ind] != NULL && argv[opt_ind + 1] != NULL) {
+ infile = argv[opt_ind];
+ outfile = argv[opt_ind + 1];
+
+ if ( HDstrcmp( infile, outfile ) == 0) {
+ error_msg("file names cannot be the same\n");
+ usage(h5tools_getprogname());
+ h5tools_setstatus(EXIT_FAILURE);
+ goto done;
+ }
+ }
+ else {
+ error_msg("file names missing\n");
+ usage(h5tools_getprogname());
+ h5tools_setstatus(EXIT_FAILURE);
+ goto done;
+ }
+ }
+
+ if (enable_error_stack) {
+ H5Eset_auto2(H5E_DEFAULT, func, edata);
+ H5Eset_auto2(H5tools_ERR_STACK_g, tools_func, tools_edata);
+ }
+
+ /* pack it */
h5tools_setstatus(h5repack(infile, outfile, &options));
done:
diff --git a/tools/h5repack/h5repack_refs.c b/tools/h5repack/h5repack_refs.c
index 3f99704..b2755c2 100644
--- a/tools/h5repack/h5repack_refs.c
+++ b/tools/h5repack/h5repack_refs.c
@@ -50,6 +50,7 @@ int do_copy_refobjs(hid_t fidin,
trav_table_t *travt,
pack_opt_t *options) /* repack options */
{
+ int ret_value = 0; /*no need to LEAVE() on ERROR: HERR_INIT(int, SUCCEED) */
hid_t grp_in = (-1); /* read group ID */
hid_t grp_out = (-1); /* write group ID */
hid_t dset_in = (-1); /* read dataset ID */
@@ -85,18 +86,18 @@ int do_copy_refobjs(hid_t fidin,
*-------------------------------------------------------------------------
*/
if((grp_out = H5Gopen2(fidout, travt->objs[i].name, H5P_DEFAULT)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Gopen2 failed");
if((grp_in = H5Gopen2(fidin, travt->objs[i].name, H5P_DEFAULT)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Gopen2 failed");
if(copy_refs_attr(grp_in, grp_out, options, travt, fidout) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "copy_refs_attr failed");
if(H5Gclose(grp_out) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Gclose failed");
if(H5Gclose(grp_in) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Gclose failed");
/*-------------------------------------------------------------------------
* check for hard links
@@ -113,26 +114,26 @@ int do_copy_refobjs(hid_t fidin,
*/
case H5TRAV_TYPE_DATASET:
if((dset_in = H5Dopen2(fidin, travt->objs[i].name, H5P_DEFAULT)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dopen2 failed");
if((space_id = H5Dget_space(dset_in)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dget_space failed");
if((ftype_id = H5Dget_type(dset_in)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dget_type failed");
if((dcpl_id = H5Dget_create_plist(dset_in)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dget_create_plist failed");
if((rank = H5Sget_simple_extent_ndims(space_id)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sget_simple_extent_ndims failed");
if(H5Sget_simple_extent_dims(space_id, dims, NULL) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sget_simple_extent_dims failed");
nelmts = 1;
for(k = 0; k < rank; k++)
nelmts *= dims[k];
if((mtype_id = h5tools_get_native_type(ftype_id)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "h5tools_get_native_type failed");
if((msize = H5Tget_size(mtype_id)) == 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tget_size failed");
/*-------------------------------------------------------------------------
* check if the dataset creation property list has filters that
@@ -168,15 +169,15 @@ int do_copy_refobjs(hid_t fidin,
buf = (hobj_ref_t *)HDmalloc((unsigned)(nelmts * msize));
if(buf==NULL) {
printf("cannot read into memory\n" );
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "HDmalloc failed");
} /* end if */
if(H5Dread(dset_in, mtype_id, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dread failed");
refbuf = (hobj_ref_t*) HDcalloc((unsigned)nelmts, msize);
if(refbuf == NULL){
printf("cannot allocate memory\n" );
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "HDcalloc failed");
} /* end if */
for(u = 0; u < nelmts; u++) {
H5E_BEGIN_TRY {
@@ -190,7 +191,7 @@ int do_copy_refobjs(hid_t fidin,
if((refname = MapIdToName(refobj_id, travt)) != NULL) {
/* create the reference, -1 parameter for objects */
if(H5Rcreate(&refbuf[u], fidout, refname, H5R_OBJECT, (hid_t)-1) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Rcreate failed");
if(options->verbose)
{
printf(FORMAT_OBJ,"dset",travt->objs[i].name );
@@ -208,10 +209,10 @@ int do_copy_refobjs(hid_t fidin,
*-------------------------------------------------------------------------
*/
if((dset_out = H5Dcreate2(fidout, travt->objs[i].name, mtype_id, space_id, H5P_DEFAULT, dcpl_id, H5P_DEFAULT)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dcreate2 failed");
if(nelmts)
if(H5Dwrite(dset_out, mtype_id, H5S_ALL, H5S_ALL, H5P_DEFAULT, refbuf) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dwrite failed");
if(buf)
HDfree(buf);
@@ -222,7 +223,7 @@ int do_copy_refobjs(hid_t fidin,
* copy attrs
*----------------------------------------------------*/
if(copy_attr(dset_in, dset_out, &named_dt_head, travt, options) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "copy_attr failed");
} /*H5T_STD_REF_OBJ*/
/*-------------------------------------------------------------------------
@@ -245,10 +246,10 @@ int do_copy_refobjs(hid_t fidin,
buf = (hdset_reg_ref_t *)HDmalloc((unsigned)(nelmts * msize));
if(buf == NULL) {
printf("cannot read into memory\n");
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "HDmalloc failed");
} /* end if */
if(H5Dread(dset_in, mtype_id, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dread failed");
/*-------------------------------------------------------------------------
* create output
@@ -257,7 +258,7 @@ int do_copy_refobjs(hid_t fidin,
refbuf = (hdset_reg_ref_t *)HDcalloc(sizeof(hdset_reg_ref_t), (size_t)nelmts); /*init to zero */
if(refbuf == NULL) {
printf("cannot allocate memory\n");
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "HDcalloc failed");
} /* end if */
for(u = 0; u < nelmts; u++) {
@@ -273,13 +274,13 @@ int do_copy_refobjs(hid_t fidin,
hid_t region_id; /* region id of the referenced dataset */
if((region_id = H5Rget_region(dset_in, H5R_DATASET_REGION, &buf[u])) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Rget_region failed");
/* create the reference, we need the space_id */
if(H5Rcreate(&refbuf[u], fidout, refname, H5R_DATASET_REGION, region_id) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Rcreate failed");
if(H5Sclose(region_id) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sclose failed");
if(options->verbose)
{
@@ -300,10 +301,10 @@ int do_copy_refobjs(hid_t fidin,
*-------------------------------------------------------------------------
*/
if((dset_out = H5Dcreate2(fidout, travt->objs[i].name, mtype_id, space_id, H5P_DEFAULT, dcpl_id, H5P_DEFAULT)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dcreate2 failed");
if(nelmts)
if(H5Dwrite(dset_out, mtype_id, H5S_ALL, H5S_ALL, H5P_DEFAULT, refbuf) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dwrite failed");
if(buf)
HDfree(buf);
@@ -314,7 +315,7 @@ int do_copy_refobjs(hid_t fidin,
* copy attrs
*----------------------------------------------------*/
if(copy_attr(dset_in, dset_out, &named_dt_head, travt, options) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "copy_attr failed");
} /* H5T_STD_REF_DSETREG */
/*-------------------------------------------------------------------------
* not references, open previously created object in 1st traversal
@@ -322,7 +323,7 @@ int do_copy_refobjs(hid_t fidin,
*/
else {
if((dset_out = H5Dopen2(fidout, travt->objs[i].name, H5P_DEFAULT)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dopen2 failed");
} /* end else */
HDassert(dset_out != FAIL);
@@ -332,7 +333,7 @@ int do_copy_refobjs(hid_t fidin,
*-------------------------------------------------------------------------
*/
if(copy_refs_attr(dset_in, dset_out, options, travt, fidout) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "copy_refs_attr failed");
/*-------------------------------------------------------------------------
* check for hard links
@@ -343,7 +344,7 @@ int do_copy_refobjs(hid_t fidin,
H5Lcreate_hard(fidout, travt->objs[i].name, H5L_SAME_LOC, travt->objs[i].links[j].new_name, H5P_DEFAULT, H5P_DEFAULT);
if(H5Dclose(dset_out) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dclose failed");
} /*can_read*/
/*-------------------------------------------------------------------------
@@ -351,15 +352,15 @@ int do_copy_refobjs(hid_t fidin,
*-------------------------------------------------------------------------
*/
if(H5Tclose(ftype_id) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed");
if(H5Tclose(mtype_id) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed");
if(H5Pclose(dcpl_id) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
if(H5Sclose(space_id) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sclose failed");
if(H5Dclose(dset_in) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dclose failed");
break;
/*-------------------------------------------------------------------------
@@ -368,9 +369,9 @@ int do_copy_refobjs(hid_t fidin,
*/
case H5TRAV_TYPE_NAMED_DATATYPE:
if((type_in = H5Topen2(fidin, travt->objs[i].name, H5P_DEFAULT)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Topen2 failed");
if(H5Tclose(type_in) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed");
break;
/*-------------------------------------------------------------------------
@@ -383,7 +384,7 @@ int do_copy_refobjs(hid_t fidin,
case H5TRAV_TYPE_UNKNOWN:
case H5TRAV_TYPE_UDLINK:
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5TRAV invalid type");
default:
break;
@@ -398,7 +399,7 @@ int do_copy_refobjs(hid_t fidin,
return 0;
-error:
+done:
H5E_BEGIN_TRY {
H5Gclose(grp_in);
H5Gclose(grp_out);
@@ -450,6 +451,7 @@ static int copy_refs_attr(hid_t loc_in,
hid_t fidout /* for saving references */
)
{
+ int ret_value = 0; /*no need to LEAVE() on ERROR: HERR_INIT(int, SUCCEED) */
hid_t attr_id = -1; /* attr ID */
hid_t attr_out = -1; /* attr ID */
hid_t space_id = -1; /* space ID */
@@ -473,26 +475,26 @@ static int copy_refs_attr(hid_t loc_in,
if(H5Oget_info(loc_in, &oinfo) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Oget_info failed");
for(u = 0; u < (unsigned)oinfo.num_attrs; u++) {
is_ref = is_ref_vlen = is_ref_array = is_ref_comp = 0;
/* open attribute */
if((attr_id = H5Aopen_by_idx(loc_in, ".", H5_INDEX_CRT_ORDER, H5_ITER_INC, (hsize_t)u, H5P_DEFAULT, H5P_DEFAULT)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Aopen_by_idx failed");
/* get the file datatype */
if((ftype_id = H5Aget_type(attr_id)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Aget_type failed");
type_class = H5Tget_class(ftype_id);
if((mtype_id = h5tools_get_native_type(ftype_id)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "h5tools_get_native_type failed");
if((msize = H5Tget_size(mtype_id)) == 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tget_size failed");
is_ref = (type_class == H5T_REFERENCE);
@@ -516,7 +518,7 @@ static int copy_refs_attr(hid_t loc_in,
int nmembers = H5Tget_nmembers(ftype_id) ;
if (nmembers < 1)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tget_nmembers failed");
ref_comp_index = (int *)HDmalloc(nmembers*sizeof (int));
ref_comp_size = (size_t *)HDmalloc(nmembers*sizeof(ref_comp_size));
@@ -560,15 +562,15 @@ static int copy_refs_attr(hid_t loc_in,
/* get name */
if(H5Aget_name(attr_id, 255, name) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Aget_name failed");
/* get the dataspace handle */
if((space_id = H5Aget_space(attr_id)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Aget_space failed");
/* get dimensions */
if((rank = H5Sget_simple_extent_dims(space_id, dims, NULL)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sget_simple_extent_dims failed");
/*-------------------------------------------------------------------------
@@ -597,7 +599,7 @@ static int copy_refs_attr(hid_t loc_in,
}
if((attr_out = H5Acreate2(loc_out, name, ftype_id, space_id, H5P_DEFAULT, H5P_DEFAULT)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Acreate2 failed");
if (nelmts>0) {
/* handle object references */
@@ -605,15 +607,15 @@ static int copy_refs_attr(hid_t loc_in,
buf = (hobj_ref_t *)HDmalloc((unsigned)(nelmts * msize));
if(buf == NULL) {
printf("cannot read into memory\n");
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "HDmalloc failed");
} /* end if */
if(H5Aread(attr_id, mtype_id, buf) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Aread failed");
refbuf = (hobj_ref_t *)HDcalloc((unsigned)nelmts, msize);
if(refbuf == NULL) {
printf("cannot allocate memory\n");
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "HDcalloc failed");
} /* end if */
for(i = 0; i < (unsigned)nelmts; i++) {
@@ -629,10 +631,10 @@ static int copy_refs_attr(hid_t loc_in,
if(buf == NULL) {
printf( "cannot read into memory\n" );
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "HDmalloc failed");
} /* end if */
if(H5Aread(attr_id, mtype_id, buf) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Aread failed");
/*-------------------------------------------------------------------------
* create output
@@ -641,7 +643,7 @@ static int copy_refs_attr(hid_t loc_in,
refbuf = (hdset_reg_ref_t *)HDcalloc(sizeof(hdset_reg_ref_t), (size_t)nelmts); /*init to zero */
if(refbuf == NULL) {
printf( "cannot allocate memory\n" );
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "HDcalloc failed");
} /* end if */
for(i = 0; i < (unsigned)nelmts; i++) {
@@ -659,11 +661,11 @@ static int copy_refs_attr(hid_t loc_in,
if(buf == NULL) {
printf( "cannot read into memory\n" );
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "HDmalloc failed");
} /* end if */
if(H5Aread(attr_id, mtype_id, buf) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Aread failed");
if (H5R_OBJ_REF_BUF_SIZE==msize) {
hobj_ref_t ref_out;
@@ -700,11 +702,11 @@ static int copy_refs_attr(hid_t loc_in,
if(buf == NULL)
{
printf( "cannot read into memory\n" );
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "HDmalloc failed");
} /* end if */
if(H5Aread(attr_id, mtype_id, buf) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Aread failed");
for (i=0; i<(unsigned)nelmts; i++) {
for (j=0; j<(unsigned)ref_comp_field_n; j++) {
@@ -727,7 +729,7 @@ static int copy_refs_attr(hid_t loc_in,
} /* else if (is_ref_comp) */
if(H5Awrite(attr_out, mtype_id, refbuf) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Awrite failed");
if (is_ref_vlen && buf)
H5Dvlen_reclaim (mtype_id, space_id, H5P_DEFAULT, buf);
@@ -757,25 +759,25 @@ static int copy_refs_attr(hid_t loc_in,
}
if(H5Aclose(attr_out) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Aclose failed");
/*-------------------------------------------------------------------------
* close
*-------------------------------------------------------------------------
*/
if(H5Tclose(ftype_id) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed");
if(H5Tclose(mtype_id) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed");
if(H5Sclose(space_id) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sclose failed");
if(H5Aclose(attr_id) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Aclose failed");
} /* for(u = 0; u < (unsigned)oinfo.num_attrs; u++) */
return 0;
-error:
+done:
if(refbuf)
HDfree(refbuf);
if(buf)
@@ -845,28 +847,29 @@ out:
static herr_t update_ref_value(hid_t obj_id, H5R_type_t ref_type, void *ref_in,
hid_t fid_out, void *ref_out, trav_table_t *travt)
{
- herr_t ret = -1;
+ int ret_value = 0; /*no need to LEAVE() on ERROR: HERR_INIT(int, SUCCEED) */
+ herr_t ret = -1;
const char* ref_obj_name;
hid_t space_id=-1, ref_obj_id=-1;
ref_obj_id = H5Rdereference2(obj_id, H5P_DEFAULT, ref_type, ref_in);
if (ref_obj_id<0)
- goto done;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Rdereference2 failed");
ref_obj_name = MapIdToName(ref_obj_id, travt);
if (ref_obj_name == NULL)
- goto done;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "MapIdToName failed");
if (ref_type == H5R_DATASET_REGION) {
space_id = H5Rget_region(obj_id, H5R_DATASET_REGION, ref_in);
if (space_id < 0)
- goto done;
- }
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Rget_region failed");
+ }
ret = H5Rcreate(ref_out, fid_out, ref_obj_name, ref_type, space_id);
if (ret < 0)
- goto done;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Rcreate failed");
ret = 0;
diff --git a/tools/h5repack/h5repack_verify.c b/tools/h5repack/h5repack_verify.c
index 52423f1..9565ce3 100644
--- a/tools/h5repack/h5repack_verify.c
+++ b/tools/h5repack/h5repack_verify.c
@@ -51,6 +51,7 @@ static int verify_filters(hid_t pid, hid_t tid, int nfilters, filter_info_t *fil
int
h5repack_verify(const char *in_fname, const char *out_fname, pack_opt_t *options)
{
+ int ret_value = 0; /*no need to LEAVE() on ERROR: HERR_INIT(int, SUCCEED) */
hid_t fidin = -1; /* file ID for input file*/
hid_t fidout = -1; /* file ID for output file*/
hid_t did = -1; /* dataset ID */
@@ -79,13 +80,13 @@ h5repack_verify(const char *in_fname, const char *out_fname, pack_opt_t *options
*-------------------------------------------------------------------------
*/
if((did = H5Dopen2(fidout, name, H5P_DEFAULT)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dopen2 failed");
if((sid = H5Dget_space(did)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dget_space failed");
if((pid = H5Dget_create_plist(did)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dget_create_plist failed");
if((tid = H5Dget_type(did)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dget_type failed");
/*-------------------------------------------------------------------------
* filter check
@@ -107,13 +108,13 @@ h5repack_verify(const char *in_fname, const char *out_fname, pack_opt_t *options
*-------------------------------------------------------------------------
*/
if(H5Pclose(pid) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
if (H5Sclose(sid) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sclose failed");
if (H5Dclose(did) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dclose failed");
if (H5Tclose(tid) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed");
}
@@ -131,7 +132,7 @@ h5repack_verify(const char *in_fname, const char *out_fname, pack_opt_t *options
/* get the list of objects in the file */
if(h5trav_gettable(fidout, travt) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "h5trav_gettable failed");
for(i = 0; i < travt->nobjs; i++)
{
@@ -145,13 +146,13 @@ h5repack_verify(const char *in_fname, const char *out_fname, pack_opt_t *options
*-------------------------------------------------------------------------
*/
if((did = H5Dopen2(fidout, name, H5P_DEFAULT)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dopen2 failed");
if((sid = H5Dget_space(did)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dget_space failed");
if((pid = H5Dget_create_plist(did)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dget_create_plist failed");
if((tid = H5Dget_type(did)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dget_type failed");
/*-------------------------------------------------------------------------
* filter check
@@ -184,13 +185,13 @@ h5repack_verify(const char *in_fname, const char *out_fname, pack_opt_t *options
*-------------------------------------------------------------------------
*/
if (H5Pclose(pid) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
if (H5Sclose(sid) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sclose failed");
if (H5Dclose(did) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dclose failed");
if (H5Tclose(tid) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed");
} /* if */
} /* i */
@@ -207,31 +208,31 @@ h5repack_verify(const char *in_fname, const char *out_fname, pack_opt_t *options
/* open the input file */
if((fidin = H5Fopen(in_fname, H5F_ACC_RDONLY, H5P_DEFAULT)) < 0 )
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Fopen failed");
/* Get file creation property list for input file */
if((fcpl_in = H5Fget_create_plist(fidin)) < 0) {
- error_msg("failed to retrieve file creation property list\n");
- goto error;
+ error_msg("failed to retrieve file creation property list\n");
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Fget_create_plist failed");
}
/* Get file space management info for input file */
if(H5Pget_file_space(fcpl_in, &in_strat, &in_thresh) < 0) {
- error_msg("failed to retrieve file space strategy & threshold\n");
- goto error;
+ error_msg("failed to retrieve file space strategy & threshold\n");
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pget_file_space failed");
}
/* Output file is already opened */
/* Get file creation property list for output file */
if((fcpl_out = H5Fget_create_plist(fidout)) < 0) {
- error_msg("failed to retrieve file creation property list\n");
- goto error;
+ error_msg("failed to retrieve file creation property list\n");
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Fget_create_plist failed");
}
/* Get file space management info for output file */
if(H5Pget_file_space(fcpl_out, &out_strat, &out_thresh) < 0) {
- error_msg("failed to retrieve file space strategy & threshold\n");
- goto error;
+ error_msg("failed to retrieve file space strategy & threshold\n");
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pget_file_space failed");
}
/*
@@ -243,12 +244,13 @@ h5repack_verify(const char *in_fname, const char *out_fname, pack_opt_t *options
* as what is set via the strategy option
*/
if(!options->fs_strategy && out_strat != in_strat) {
- error_msg("file space strategy not set as unexpected\n");
- goto error;
+ error_msg("file space strategy not set as unexpected\n");
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "file space strategy not set as unexpected");
- } else if(options->fs_strategy && out_strat!= options->fs_strategy) {
- error_msg("file space strategy not set as unexpectec\n");
- goto error;
+ }
+ else if(options->fs_strategy && out_strat!= options->fs_strategy) {
+ error_msg("file space strategy not set as unexpected\n");
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "file space strategy not set as unexpected");
}
/*
@@ -260,27 +262,27 @@ h5repack_verify(const char *in_fname, const char *out_fname, pack_opt_t *options
* as what is set via the threshold option.
*/
if(!options->fs_threshold && out_thresh != in_thresh) {
- error_msg("free space threshold not set as unexpected\n");
- goto error;
-
- } else if(options->fs_threshold && out_thresh != options->fs_threshold) {
- error_msg("free space threshold not set as unexpectec\n");
- goto error;
+ error_msg("free space threshold not set as unexpected\n");
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "free space threshold not set as unexpected");
+ }
+ else if(options->fs_threshold && out_thresh != options->fs_threshold) {
+ error_msg("free space threshold not set as unexpected\n");
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "free space threshold not set as unexpected");
}
/* Closing */
if (H5Pclose(fcpl_in) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
if (H5Pclose(fcpl_out) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
if (H5Fclose(fidin) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Fclose failed");
if (H5Fclose(fidout) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Fclose failed");
return ok;
-error:
+done:
H5E_BEGIN_TRY {
H5Pclose(fcpl_in);
H5Pclose(fcpl_out);
@@ -370,6 +372,7 @@ int verify_layout(hid_t pid,
int h5repack_cmp_pl(const char *fname1,
const char *fname2)
{
+ int ret_value = 0; /*no need to LEAVE() on ERROR: HERR_INIT(int, SUCCEED) */
hid_t fid1=-1; /* file ID */
hid_t fid2=-1; /* file ID */
hid_t dset1=-1; /* dataset ID */
@@ -414,7 +417,7 @@ int h5repack_cmp_pl(const char *fname1,
*/
trav_table_init(&trav);
if(h5trav_gettable(fid1, trav) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "h5trav_gettable failed");
/*-------------------------------------------------------------------------
* traverse the suppplied object list
@@ -427,31 +430,30 @@ int h5repack_cmp_pl(const char *fname1,
{
if ((gid = H5Gopen2(fid1, trav->objs[i].name, H5P_DEFAULT)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Gopen2 failed");
if ((gcplid = H5Gget_create_plist(gid)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Gget_create_plist failed");
if (H5Pget_link_creation_order(gcplid, &crt_order_flag1) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pget_link_creation_order failed");
if (H5Pclose(gcplid) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
if (H5Gclose(gid) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Gclose failed");
if ((gid = H5Gopen2(fid2, trav->objs[i].name, H5P_DEFAULT)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Gopen2 failed");
if ((gcplid = H5Gget_create_plist(gid)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Gget_create_plist failed");
if (H5Pget_link_creation_order(gcplid, &crt_order_flag2) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pget_link_creation_order failed");
if (H5Pclose(gcplid) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
if (H5Gclose(gid) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Gclose failed");
- if ( crt_order_flag1 != crt_order_flag2 )
- {
+ if (crt_order_flag1 != crt_order_flag2) {
error_msg("property lists for <%s> are different\n",trav->objs[i].name);
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "property lists failed");
}
}
@@ -461,25 +463,24 @@ int h5repack_cmp_pl(const char *fname1,
else if(trav->objs[i].type == H5TRAV_TYPE_DATASET)
{
if((dset1 = H5Dopen2(fid1, trav->objs[i].name, H5P_DEFAULT)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dopen2 failed");
if((dset2 = H5Dopen2(fid2, trav->objs[i].name, H5P_DEFAULT)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dopen2 failed");
if((dcpl1 = H5Dget_create_plist(dset1)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dget_create_plist failed");
if((dcpl2 = H5Dget_create_plist(dset2)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dget_create_plist failed");
/*-------------------------------------------------------------------------
* compare the property lists
*-------------------------------------------------------------------------
*/
if((ret = H5Pequal(dcpl1, dcpl2)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pequal failed");
- if(ret == 0)
- {
+ if(ret == 0) {
error_msg("property lists for <%s> are different\n",trav->objs[i].name);
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "property lists failed");
}
/*-------------------------------------------------------------------------
@@ -487,13 +488,13 @@ int h5repack_cmp_pl(const char *fname1,
*-------------------------------------------------------------------------
*/
if(H5Pclose(dcpl1) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
if(H5Pclose(dcpl2) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
if(H5Dclose(dset1) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dclose failed");
if(H5Dclose(dset2) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dclose failed");
} /*if*/
} /*i*/
@@ -518,7 +519,7 @@ int h5repack_cmp_pl(const char *fname1,
*-------------------------------------------------------------------------
*/
-error:
+done:
H5E_BEGIN_TRY
{
H5Pclose(dcpl1);
diff --git a/tools/lib/h5tools.c b/tools/lib/h5tools.c
index 19d71bb..22c611f 100644
--- a/tools/lib/h5tools.c
+++ b/tools/lib/h5tools.c
@@ -51,6 +51,7 @@ int packed_bits_num; /* number of packed bits to display */
int packed_data_offset; /* offset of packed bits to display */
int packed_data_length; /* lengtht of packed bits to display */
unsigned long long packed_data_mask; /* mask in which packed bits to display */
+int enable_error_stack= FALSE; /* re-enable error stack */
/* module-scoped variables */
static int h5tools_init_g; /* if h5tools lib has been initialized */
diff --git a/tools/lib/h5tools.h b/tools/lib/h5tools.h
index cec3b9d..ca2b39a 100644
--- a/tools/lib/h5tools.h
+++ b/tools/lib/h5tools.h
@@ -561,6 +561,9 @@ H5TOOLS_DLLVAR int oid_output; /* oid output */
H5TOOLS_DLLVAR int data_output; /* data output */
H5TOOLS_DLLVAR int attr_data_output; /* attribute data output */
+/* things to display or which are set via command line parameters */
+H5TOOLS_DLLVAR int enable_error_stack; /* re-enable error stack */
+
/* Strings for output */
#define H5_TOOLS_GROUP "GROUP"
#define H5_TOOLS_DATASET "DATASET"
@@ -569,11 +572,11 @@ H5TOOLS_DLLVAR int attr_data_output; /* attribute data output */
/* Definitions of useful routines */
H5TOOLS_DLL void h5tools_init(void);
H5TOOLS_DLL void h5tools_close(void);
-H5TOOLS_DLL int h5tools_set_data_output_file(const char *fname, int is_bin);
-H5TOOLS_DLL int h5tools_set_attr_output_file(const char *fname, int is_bin);
-H5TOOLS_DLL int h5tools_set_input_file(const char *fname, int is_bin);
-H5TOOLS_DLL int h5tools_set_output_file(const char *fname, int is_bin);
-H5TOOLS_DLL int h5tools_set_error_file(const char *fname, int is_bin);
+H5TOOLS_DLL int h5tools_set_data_output_file(const char *fname, int is_bin);
+H5TOOLS_DLL int h5tools_set_attr_output_file(const char *fname, int is_bin);
+H5TOOLS_DLL int h5tools_set_input_file(const char *fname, int is_bin);
+H5TOOLS_DLL int h5tools_set_output_file(const char *fname, int is_bin);
+H5TOOLS_DLL int h5tools_set_error_file(const char *fname, int is_bin);
H5TOOLS_DLL hid_t h5tools_fopen(const char *fname, unsigned flags, hid_t fapl,
const char *driver, char *drivername, size_t drivername_len);
H5TOOLS_DLL hid_t h5tools_get_native_type(hid_t type);