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-rw-r--r--tools/h5copy/testh5copy.sh.in10
-rw-r--r--tools/h5dump/CMakeLists.txt29
-rw-r--r--tools/h5dump/testh5dump.sh.in69
-rw-r--r--tools/misc/h5cc.in19
-rw-r--r--[-rwxr-xr-x]tools/misc/h5perf_gentest.c0
-rw-r--r--tools/misc/h5redeploy.in96
6 files changed, 171 insertions, 52 deletions
diff --git a/tools/h5copy/testh5copy.sh.in b/tools/h5copy/testh5copy.sh.in
index d30d8d8..bec3bfc 100644
--- a/tools/h5copy/testh5copy.sh.in
+++ b/tools/h5copy/testh5copy.sh.in
@@ -513,7 +513,7 @@ COPY_REFERENCES()
TESTFILE="$TESTDIR/h5copy_ref.h5"
echo "Test copying object and region references"
- TOOLTEST_F -f ref -i $TESTFILE -o $TESTDIR/region_ref.out.h5 -v -s / -d /COPY
+ TOOLTEST -f ref -i $TESTFILE -o $TESTDIR/region_ref.out.h5 -v -s / -d /COPY
}
# Copy external links.
@@ -529,25 +529,25 @@ COPY_EXT_LINKS()
TOOLTEST -v -i $TESTFILE -o $TESTDIR/ext_link.out.h5 -s /group_ext/extlink_dset -d /copy1_dset
echo "Test copying external link directly with -f ext"
- TOOLTEST_F -f ext -i $TESTFILE -o $TESTDIR/ext_link_f.out.h5 -v -s /group_ext/extlink_dset -d /copy2_dset
+ TOOLTEST -f ext -i $TESTFILE -o $TESTDIR/ext_link_f.out.h5 -v -s /group_ext/extlink_dset -d /copy2_dset
echo "Test copying dangling external link (no obj) directly without -f ext"
TOOLTEST -v -i $TESTFILE -o $TESTDIR/ext_dangle_noobj.out.h5 -s /group_ext/extlink_notyet1 -d /copy_dangle1_1
echo "Test copying dangling external link (no obj) directly with -f ext"
- TOOLTEST_F -f ext -i $TESTFILE -o $TESTDIR/ext_dangle_noobj_f.out.h5 -v -s /group_ext/extlink_notyet1 -d /copy_dangle1_2
+ TOOLTEST -f ext -i $TESTFILE -o $TESTDIR/ext_dangle_noobj_f.out.h5 -v -s /group_ext/extlink_notyet1 -d /copy_dangle1_2
echo "Test copying dangling external link (no file) directly without -f ext"
TOOLTEST -v -i $TESTFILE -o $TESTDIR/ext_dangle_nofile.out.h5 -s /group_ext/extlink_notyet2 -d /copy_dangle2_1
echo "Test copying dangling external link (no file) directly with -f ext"
- TOOLTEST_F -f ext -i $TESTFILE -o $TESTDIR/ext_dangle_nofile_f.out.h5 -v -s /group_ext/extlink_notyet2 -d /copy_dangle2_2
+ TOOLTEST -f ext -i $TESTFILE -o $TESTDIR/ext_dangle_nofile_f.out.h5 -v -s /group_ext/extlink_notyet2 -d /copy_dangle2_2
echo "Test copying a group contains external links without -f ext"
TOOLTEST -v -i $TESTFILE -o $TESTDIR/ext_link_group.out.h5 -s /group_ext -d /copy1_group
echo "Test copying a group contains external links with -f ext"
- TOOLTEST_F -f ext -i $TESTFILE -o $TESTDIR/ext_link_group_f.out.h5 -v -s /group_ext -d /copy2_group
+ TOOLTEST -f ext -i $TESTFILE -o $TESTDIR/ext_link_group_f.out.h5 -v -s /group_ext -d /copy2_group
}
# Test misc.
diff --git a/tools/h5dump/CMakeLists.txt b/tools/h5dump/CMakeLists.txt
index 3f39ae3..c7ebe63 100644
--- a/tools/h5dump/CMakeLists.txt
+++ b/tools/h5dump/CMakeLists.txt
@@ -906,6 +906,33 @@ IF (BUILD_TESTING)
ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
ENDMACRO (ADD_H5ERR_MASK_TEST file)
+ MACRO (ADD_H5ERR_MASK_ENV_TEST resultfile resultcode envvar envval)
+ IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
+ ADD_TEST (
+ NAME H5DUMP-${resultfile}-clear-objects
+ COMMAND ${CMAKE_COMMAND}
+ -E remove ${resultfile}.out ${resultfile}.out.err
+ )
+ SET_TESTS_PROPERTIES (H5DUMP-${resultfile}-clear-objects PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std")
+ ADD_TEST (
+ NAME H5DUMP-${resultfile}
+ COMMAND "${CMAKE_COMMAND}"
+ -D "TEST_PROGRAM=$<TARGET_FILE:h5dump>"
+ -D "TEST_ARGS:STRING=${ARGN}"
+ -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/testfiles/std"
+ -D "TEST_OUTPUT=${resultfile}.out"
+ -D "TEST_EXPECT=${resultcode}"
+ -D "TEST_REFERENCE=${resultfile}.ddl"
+ -D "TEST_ERRREF=${resultfile}.err"
+ -D "TEST_MASK_ERROR=true"
+ -D "TEST_ENV_VAR:STRING=${envvar}"
+ -D "TEST_ENV_VALUE:STRING=${envval}"
+ -P "${HDF5_RESOURCES_DIR}/runTest.cmake"
+ )
+ SET_TESTS_PROPERTIES (H5DUMP-${resultfile} PROPERTIES DEPENDS "H5DUMP-${resultfile}-clear-objects")
+ ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
+ ENDMACRO (ADD_H5ERR_MASK_ENV_TEST)
+
MACRO (ADD_H5_TEST_IMPORT conffile resultfile testfile resultcode)
# If using memchecker add tests without using scripts
IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
@@ -1655,7 +1682,7 @@ IF (BUILD_TESTING)
ADD_H5ERR_MASK_TEST (textlink 0 --enable-error-stack textlink.h5)
# test for error stack display (BZ2048)
- ADD_H5ERR_MASK_TEST (filter_fail 1 --enable-error-stack filter_fail.h5)
+ ADD_H5ERR_MASK_ENV_TEST (filter_fail 1 "HDF5_PLUGIN_PRELOAD" "::" --enable-error-stack filter_fail.h5)
# test for -o -y for dataset with attributes
ADD_H5_TEST_EXPORT (tall-6 tall.h5 0 --enable-error-stack -d /g1/g1.1/dset1.1.1 -y -o)
diff --git a/tools/h5dump/testh5dump.sh.in b/tools/h5dump/testh5dump.sh.in
index 238eee9..ceefc08 100644
--- a/tools/h5dump/testh5dump.sh.in
+++ b/tools/h5dump/testh5dump.sh.in
@@ -38,6 +38,9 @@ DIRNAME='dirname'
LS='ls'
AWK='awk'
+# Skip plugin module to test missing filter
+ENVCMD="env HDF5_PLUGIN_PRELOAD=::"
+
nerrors=0
verbose=yes
@@ -721,6 +724,70 @@ TOOLTEST4() {
}
+# same as TOOLTEST4 but disables plugin filter loading
+# silences extra error output on some platforms
+# ADD_H5ERR_MASK_TEST
+TOOLTEST5() {
+
+ expect="$TESTDIR/$1"
+ expect_err="$TESTDIR/`basename $1 .ddl`.err"
+ actual="$TESTDIR/`basename $1 .ddl`.out"
+ actual_err="$TESTDIR/`basename $1 .ddl`.oerr"
+ actual_ext="$TESTDIR/`basename $1 .ddl`.ext"
+ actual_sav=${actual}-sav
+ actual_err_sav=${actual_err}-sav
+ shift
+
+ # Run test.
+ TESTING $DUMPER $@
+ (
+ cd $TESTDIR
+ $ENVCMD $RUNSERIAL $DUMPER_BIN "$@"
+ ) >$actual 2>$actual_err
+
+ # save actual and actual_err in case they are needed later.
+ cp $actual $actual_sav
+ STDOUT_FILTER $actual
+ cp $actual_err $actual_err_sav
+ STDERR_FILTER $actual_err
+
+ # Extract file name, line number, version and thread IDs because they may be different
+ sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \
+ -e 's/line [0-9]*/line (number)/' \
+ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \
+ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \
+ -e 's/H5Eget_auto[1-2]*/H5Eget_auto(1 or 2)/' \
+ -e 's/H5Eset_auto[1-2]*/H5Eset_auto(1 or 2)/' \
+ $actual_err > $actual_ext
+ #cat $actual_ext >> $actual
+
+ if [ ! -f $expect ]; then
+ # Create the expect file if it doesn't yet exist.
+ echo " CREATED"
+ cp $actual $expect
+ elif $CMP $expect $actual; then
+ if $CMP $expect_err $actual_ext; then
+ echo " PASSED"
+ else
+ echo "*FAILED*"
+ echo " Expected result (*.err) differs from actual result (*.oerr)"
+ nerrors="`expr $nerrors + 1`"
+ test yes = "$verbose" && $DIFF $expect_err $actual_ext |sed 's/^/ /'
+ fi
+ else
+ echo "*FAILED*"
+ echo " Expected result (*.ddl) differs from actual result (*.out)"
+ nerrors="`expr $nerrors + 1`"
+ test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /'
+ fi
+
+ # Clean up output file
+ if test -z "$HDF5_NOCLEANUP"; then
+ rm -f $actual $actual_err $actual_sav $actual_err_sav
+ fi
+
+}
+
# Print a "SKIP" message
SKIP() {
TESTING $DUMPER $@
@@ -1128,7 +1195,7 @@ TOOLTEST4 textlinkfar.ddl --enable-error-stack textlinkfar.h5
TOOLTEST4 textlink.ddl --enable-error-stack textlink.h5
# test for error stack display (BZ2048)
-TOOLTEST4 filter_fail.ddl --enable-error-stack filter_fail.h5
+TOOLTEST5 filter_fail.ddl --enable-error-stack filter_fail.h5
# test for -o -y for dataset with attributes
TOOLTEST2 tall-6.exp --enable-error-stack -y -o tall-6.txt -d /g1/g1.1/dset1.1.1 tall.h5
diff --git a/tools/misc/h5cc.in b/tools/misc/h5cc.in
index fe11c26..f62c66f 100644
--- a/tools/misc/h5cc.in
+++ b/tools/misc/h5cc.in
@@ -132,8 +132,9 @@ usage() {
echo " subdirectories [default: $prefix]"
echo " -show Show the commands without executing them"
echo " -showconfig Show the HDF5 library configuration summary"
- echo " -shlib Compile with shared HDF5 libraries"
- echo " -noshlib Compile with static HDF5 libraries [default]"
+ echo " -shlib Compile with shared HDF5 libraries [default when built with"
+ echo " disable-static]"
+ echo " -noshlib Compile with static HDF5 libraries [default when static available]"
echo " "
echo " <compile line> - the normal compile line options for your compiler."
echo " $prog_name uses the same compiler you used to compile"
@@ -350,20 +351,6 @@ if test "x$do_link" = "xyes"; then
if test -n "$flag"; then
shared_link="${flag}${libdir}"
- # Any libraries in LDFLAGS or H5BLD_LDFLAGS also should have rpaths embedded
- # in the executables created by h5cc (reduces need for LD_LIBRARY_PATH).
- if test -n "$LDFLAGS"; then
- for entry in $LDFLAGS; do
- extdir=`echo $entry | sed '/^-L/ s/^-L//'`
- shared_link="${shared_link} ${flag}${extdir}"
- done
- fi
- if test -n "$H5BLD_LDFLAGS"; then
- for entry in $H5BLD_LDFLAGS; do
- extdir=`echo $entry | sed '/^-L/ s/^-L//'`
- shared_link="${shared_link} ${flag}${extdir}"
- done
- fi
fi
if test "x$USE_SHARED_LIB" != "xyes"; then
diff --git a/tools/misc/h5perf_gentest.c b/tools/misc/h5perf_gentest.c
index 6a080d0..6a080d0 100755..100644
--- a/tools/misc/h5perf_gentest.c
+++ b/tools/misc/h5perf_gentest.c
diff --git a/tools/misc/h5redeploy.in b/tools/misc/h5redeploy.in
index ae79b70..6b6ef87 100644
--- a/tools/misc/h5redeploy.in
+++ b/tools/misc/h5redeploy.in
@@ -14,9 +14,10 @@
# access to either file, you may request a copy from help@hdfgroup.org.
#
-## Update HDF5 compiler tools after the HDF5 software has been installed
-## in a new location.
-## For help page, use "h5redeploy -help"
+## Update HDF5 compiler tools after the HDF5 software has been installed ##
+## in a new location. ##
+## For help page, use "h5redeploy -help" ##
+## ##
# Constants definitions
EXIT_SUCCESS=0
@@ -29,14 +30,20 @@ usage() {
# A wonderfully informative "usage" message.
echo "usage: $prog_name [OPTIONS]"
echo " OPTIONS:"
- echo " -help|help This help message"
- echo " -echo Show all the shell commands executed"
- echo " -force No prompt, just do it"
- echo " -prefix=DIR New directory to find HDF5 lib/ and include/"
- echo " subdirectories [default: current directory]"
- echo " -tool=TOOL Tool to update. TOOL must be in the current"
- echo " directory and writable. [default: $h5tools]"
- echo " -show Show the commands without executing them"
+ echo " -help|help This help message"
+ echo " -echo Show all the shell commands executed"
+ echo " -force No prompt, just do it"
+ echo " -prefix=DIR New directory to find HDF5 lib/ and include/"
+ echo " subdirectories [default: current directory]"
+ echo " -exec-prefix=DIR New directory to find HDF5 lib/"
+ echo " subdirectory [default: <prefix>]"
+ echo " -libdir=DIR New directory for the HDF5 lib directory"
+ echo " [default: <exec-prefix>/lib]"
+ echo " -includedir=DIR New directory for the HDF5 header files"
+ echo " [default: <prefix>/include]"
+ echo " -tool=TOOL Tool to update. TOOL must be in the current"
+ echo " directory and writable. [default: $h5tools]"
+ echo " -show Show the commands without executing them"
echo " "
exit $EXIT_FAILURE
}
@@ -70,17 +77,38 @@ ERROR()
# Main
#
+############################################################################
+## Installation directories: ##
+## prefix architecture-independent files. ##
+## exec_prefix architecture-dependent files, default is <prefix>. ##
+## libdir libraries, default is <exec_prefix>/lib. ##
+## includedir header files, default is <prefix/include>. ##
+## Not used here: ##
+## bindir executables, <exec_prefix/bin>. ##
+############################################################################
# Initialization
h5tools="h5cc h5pcc h5fc h5pfc h5c++" # possible hdf5 tools
foundtools= # tools found and will be modified
fmode= # force mode, default is off
-prefix=`(cd ..;pwd)`
+prefix=
+exec_prefix=
+libdir=
+includedir=
# Parse options
for arg in $@ ; do
case "$arg" in
-prefix=*)
- prefix="`expr "$arg" : '-prefix=\(.*\)'`"
+ prefix="`echo $arg | cut -f2 -d=`"
+ ;;
+ -exec-prefix=*)
+ exec_prefix="`echo $arg | cut -f2 -d=`"
+ ;;
+ -libdir=*)
+ libdir="`echo $arg | cut -f2 -d=`"
+ ;;
+ -includedir=*)
+ includedir="`echo $arg | cut -f2 -d=`"
;;
-echo)
set -x
@@ -89,7 +117,7 @@ for arg in $@ ; do
SHOW="echo"
;;
-tool=*)
- h5tools="`expr "$arg" : '-tool=\(.*\)'`"
+ h5tools="`echo $arg | cut -f2 -d=`"
;;
-help|help)
usage
@@ -105,10 +133,18 @@ for arg in $@ ; do
esac
done
-# Sanity checks
-if [ ! -d $prefix ]; then
- ERROR "prefix($prefix) is not an existing directory"
- exit $EXIT_FAILURE
+# Set to default value, one above where i am, if not given by user
+if [ -z "$prefix" ]; then
+ prefix=`(cd ..;pwd)`
+fi
+if [ -z "$exec_prefix" ]; then
+ exec_prefix='${prefix}' # use single quotes to prevent expansion of $
+fi
+if [ -z "$libdir" ]; then
+ libdir='${exec_prefix}'/lib # use single quotes to prevent expansion of $
+fi
+if [ -z "$includedir" ]; then
+ includedir='${prefix}'/include # use single quotes to prevent expansion of $
fi
for x in $h5tools; do
@@ -144,10 +180,19 @@ fi
CMDFILE=/tmp/h5redeploy.$$
touch $CMDFILE
chmod 0600 $CMDFILE
-echo "/^prefix/c" >> $CMDFILE
-echo prefix=\""$prefix"\" >> $CMDFILE
-echo . >> $CMDFILE
-(echo w; echo q) >> $CMDFILE
+echo "/^prefix=/c" >> $CMDFILE
+echo prefix=\""$prefix"\" >> $CMDFILE
+echo . >> $CMDFILE
+echo "/^exec_prefix=/c" >> $CMDFILE
+echo exec_prefix=\""$exec_prefix"\" >> $CMDFILE
+echo . >> $CMDFILE
+echo "/^libdir=/c" >> $CMDFILE
+echo libdir=\""$libdir"\" >> $CMDFILE
+echo . >> $CMDFILE
+echo "/^includedir=/c" >> $CMDFILE
+echo includedir=\""$includedir"\" >> $CMDFILE
+echo . >> $CMDFILE
+(echo w; echo q) >> $CMDFILE
# Update them
@@ -171,10 +216,3 @@ done
# Cleanup
rm -f $CMDFILE
exit $EXIT_SUCCESS
-
-# Some possible future features to add
-# CCBASE - Name of the alternative C compiler
-# CLINKERBASE - Name of the alternative linker
-# LDFLAGS - Path to different libraries your application will link with
-# (this path should include the path to the zlib library)
-# LIBS - Libraries your application will link with