diff options
Diffstat (limited to 'tools')
| -rw-r--r-- | tools/h5diff/testh5diff.sh.in | 72 | ||||
| -rw-r--r-- | tools/h5ls/h5ls.c | 2 | ||||
| -rw-r--r-- | tools/h5repack/h5repack.sh.in | 26 | ||||
| -rw-r--r-- | tools/lib/h5tools_dump.c | 45 | ||||
| -rw-r--r-- | tools/lib/h5tools_error.h | 2 | ||||
| -rw-r--r-- | tools/lib/h5tools_str.c | 29 |
6 files changed, 86 insertions, 90 deletions
diff --git a/tools/h5diff/testh5diff.sh.in b/tools/h5diff/testh5diff.sh.in index 07fa7ba..fec6035 100644 --- a/tools/h5diff/testh5diff.sh.in +++ b/tools/h5diff/testh5diff.sh.in @@ -385,23 +385,23 @@ CLEAN_TESTFILES_AND_TESTDIR() while [ $# -gt 0 ]; do case "$1" in -p) # reset the tool name and bin to run ph5diff tests - TESTNAME=ph5diff - H5DIFF=ph5diff # The tool name - H5DIFF_BIN=`pwd`/$H5DIFF - pmode=yes - shift - ;; + TESTNAME=ph5diff + H5DIFF=ph5diff # The tool name + H5DIFF_BIN=`pwd`/$H5DIFF + pmode=yes + shift + ;; -h) # print help page - echo "$0 [-p] [-h]" - echo " -p run ph5diff tests" - echo " -h print help page" - shift - exit 0 - ;; + echo "$0 [-p] [-h]" + echo " -p run ph5diff tests" + echo " -h print help page" + shift + exit 0 + ;; *) # unknown option echo "$0: Unknown option ($1)" - exit 1 - ;; + exit 1 + ;; esac done @@ -452,11 +452,11 @@ TOOLTEST() { # Run test. TESTING $H5DIFF $@ ( - #echo "#############################" - #echo "Expected output for '$H5DIFF $@'" - #echo "#############################" - cd $TESTDIR - eval $RUNCMD $H5DIFF_BIN "$@" + #echo "#############################" + #echo "Expected output for '$H5DIFF $@'" + #echo "#############################" + cd $TESTDIR + eval $RUNCMD $H5DIFF_BIN "$@" ) >$actual 2>$actual_err EXIT_CODE=$? # save actual and actual_err in case they are needed later. @@ -485,7 +485,7 @@ TOOLTEST() { nerrors="`expr $nerrors + 1`" test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' else - # parallel mode output are often of different ordering from serial + # parallel mode output are often of different ordering from serial # output. If the sorted expected and actual files compare the same, # it is safe to assume the actual output match the expected file. expect_sorted=expect_sorted @@ -496,22 +496,22 @@ TOOLTEST() { # is done by serial mode. grep -v "EXIT CODE:" $expect_sorted > $expect_sorted.noexit mv $expect_sorted.noexit $expect_sorted - if $CMP $expect_sorted $actual_sorted; then - echo " PASSED" - else - echo "*FAILED*" - nerrors="`expr $nerrors + 1`" - if test yes = "$verbose"; then - echo "====Expected result ($expect_sorted) differs from actual result ($actual_sorted)" - $DIFF $expect_sorted $actual_sorted |sed 's/^/ /' - echo "====The actual output ($actual_sav)" - sed 's/^/ /' < $actual_sav - echo "====The actual stderr ($actual_err_sav)" - sed 's/^/ /' < $actual_err_sav - echo "====End of actual stderr ($actual_err_sav)" - echo "" - fi - fi + if $CMP $expect_sorted $actual_sorted; then + echo " PASSED" + else + echo "*FAILED*" + nerrors="`expr $nerrors + 1`" + if test yes = "$verbose"; then + echo "====Expected result ($expect_sorted) differs from actual result ($actual_sorted)" + $DIFF $expect_sorted $actual_sorted |sed 's/^/ /' + echo "====The actual output ($actual_sav)" + sed 's/^/ /' < $actual_sav + echo "====The actual stderr ($actual_err_sav)" + sed 's/^/ /' < $actual_err_sav + echo "====End of actual stderr ($actual_err_sav)" + echo "" + fi + fi fi # Clean up output file diff --git a/tools/h5ls/h5ls.c b/tools/h5ls/h5ls.c index f291958..cce5f3d 100644 --- a/tools/h5ls/h5ls.c +++ b/tools/h5ls/h5ls.c @@ -1759,7 +1759,6 @@ dataset_list2(hid_t dset, const char H5_ATTR_UNUSED *name) size_t cd_nelmts; /* filter client number of values */ size_t cd_num; /* filter client data counter */ char f_name[256]; /* filter/file name */ - char dset_name[256]; /* filter/file name */ char s[64]; /* temporary string buffer */ off_t f_offset; /* offset in external file */ hsize_t f_size; /* bytes used in external file */ @@ -1850,6 +1849,7 @@ dataset_list2(hid_t dset, const char H5_ATTR_UNUSED *name) case H5D_VIRTUAL: { + char dset_name[256]; /* Dataset name */ size_t vmaps; H5Pget_virtual_count(dcpl, &vmaps); diff --git a/tools/h5repack/h5repack.sh.in b/tools/h5repack/h5repack.sh.in index 478ca36..24298d0 100644 --- a/tools/h5repack/h5repack.sh.in +++ b/tools/h5repack/h5repack.sh.in @@ -171,7 +171,7 @@ COPY_TESTFILES_TO_TESTDIR() INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` INODE_DDIR=`$LS -i -d $TESTDIR | $AWK -F' ' '{print $1}'` if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then - $CP -f $tstfile $TESTDIR + $CP -f $tstfile $TESTDIR if [ $? -ne 0 ]; then echo "Error: FAILED to copy $tstfile ." @@ -469,11 +469,11 @@ TOOLTEST1() ) RET=$? if [ $RET != 0 ] ; then - echo "*FAILED*" - nerrors="`expr $nerrors + 1`" + echo "*FAILED*" + nerrors="`expr $nerrors + 1`" else - echo " PASSED" - DIFFTEST $infile $outfile + echo " PASSED" + DIFFTEST $infile $outfile fi rm -f $outfile } @@ -500,11 +500,11 @@ TOOLTESTV() ) >$actual 2>$actual_err RET=$? if [ $RET != 0 ] ; then - echo "*FAILED*" - nerrors="`expr $nerrors + 1`" + echo "*FAILED*" + nerrors="`expr $nerrors + 1`" else - echo " PASSED" - DIFFTEST $infile $outfile + echo " PASSED" + DIFFTEST $infile $outfile fi # display output compare @@ -634,11 +634,11 @@ TOOLTEST_META() # verify sizes. MESSAGE "Verify the sizes of both output files ($size1 vs $size2)" if [ $size1 -lt $size2 ]; then - # pass - echo " PASSED" + # pass + echo " PASSED" else - #fail - echo "*FAILED*" + #fail + echo "*FAILED*" nerrors="`expr $nerrors + 1`" fi diff --git a/tools/lib/h5tools_dump.c b/tools/lib/h5tools_dump.c index 7928dfb..0d39981 100644 --- a/tools/lib/h5tools_dump.c +++ b/tools/lib/h5tools_dump.c @@ -225,13 +225,12 @@ void h5tools_print_dims(h5tools_str_t *buffer, hsize_t *s, int dims); void h5tools_dump_subsetting_header(FILE *stream, const h5tool_format_t *info, h5tools_context_t *ctx, struct subset_t *sset, int dims); -void h5tools_print_virtual_selection(hid_t vspace, hid_t dcpl_id, size_t index, +static void h5tools_print_virtual_selection(hid_t vspace, FILE *stream, const h5tool_format_t *info, h5tools_context_t *ctx/*in,out*/, h5tools_str_t *buffer/*string into which to render */, hsize_t *curr_pos/*total data element position*/, - size_t ncols, hsize_t region_elmt_counter/*element counter*/, - hsize_t elmt_counter); + size_t ncols); void h5tools_dump_init(void) @@ -820,10 +819,11 @@ h5tools_print_region_data_points(hid_t region_space, hid_t region_id, HDassert(cur_ctx); HDassert(buffer); HDassert(ptdata); + HDassert(ndims > 0); HDmemset(&ctx, 0, sizeof(ctx)); /* Allocate space for the dimension array */ - if((dims1 = (hsize_t *) HDmalloc(sizeof(hsize_t) * ndims)) == NULL) + if((dims1 = (hsize_t *) HDmalloc(sizeof(hsize_t) * (size_t)ndims)) == NULL) HGOTO_ERROR(FAIL, H5E_tools_min_id_g, "Could not allocate buffer for dims"); dims1[0] = npoints; @@ -2871,19 +2871,18 @@ h5tools_dump_oid(FILE *stream, const h5tool_format_t *info, * Return: void *------------------------------------------------------------------------- */ -void -h5tools_print_virtual_selection(hid_t vspace, hid_t dcpl_id, size_t index, +static void +h5tools_print_virtual_selection(hid_t vspace, FILE *stream, const h5tool_format_t *info, h5tools_context_t *ctx/*in,out*/, h5tools_str_t *buffer/*string into which to render */, hsize_t *curr_pos/*total data element position*/, - size_t ncols, hsize_t region_elmt_counter/*element counter*/, - hsize_t elmt_counter) + size_t ncols) { switch(H5Sget_select_type(vspace)) { case H5S_SEL_NONE: /* Nothing selected */ ctx->need_prefix = TRUE; - h5tools_simple_prefix(stream, info, ctx, curr_pos, 0); + h5tools_simple_prefix(stream, info, ctx, *curr_pos, 0); h5tools_str_reset(buffer); h5tools_str_append(buffer, "%s", VDS_NONE); @@ -2896,7 +2895,7 @@ h5tools_print_virtual_selection(hid_t vspace, hid_t dcpl_id, size_t index, break; case H5S_SEL_HYPERSLABS: /* "New-style" hyperslab selection defined */ ctx->need_prefix = TRUE; - h5tools_simple_prefix(stream, info, ctx, curr_pos, 0); + h5tools_simple_prefix(stream, info, ctx, *curr_pos, 0); h5tools_str_reset(buffer); if (H5Sis_regular_hyperslab(vspace)) { @@ -2911,7 +2910,7 @@ h5tools_print_virtual_selection(hid_t vspace, hid_t dcpl_id, size_t index, h5tools_render_element(stream, info, ctx, buffer, curr_pos, (size_t) ncols, (hsize_t) 0, (hsize_t) 0); ctx->indent_level++; ctx->need_prefix = TRUE; - h5tools_simple_prefix(stream, info, ctx, curr_pos, 0); + h5tools_simple_prefix(stream, info, ctx, *curr_pos, 0); h5tools_str_reset(buffer); h5tools_str_dump_space_blocks(buffer, vspace, info); @@ -2919,14 +2918,14 @@ h5tools_print_virtual_selection(hid_t vspace, hid_t dcpl_id, size_t index, } h5tools_render_element(stream, info, ctx, buffer, curr_pos, (size_t) ncols, (hsize_t) 0, (hsize_t) 0); ctx->need_prefix = TRUE; - h5tools_simple_prefix(stream, info, ctx, curr_pos, 0); + h5tools_simple_prefix(stream, info, ctx, *curr_pos, 0); h5tools_str_reset(buffer); h5tools_str_append(buffer, "%s", h5tools_dump_header_format->virtualselectionblockend); break; case H5S_SEL_ALL: /* Entire extent selected */ ctx->need_prefix = TRUE; - h5tools_simple_prefix(stream, info, ctx, curr_pos, 0); + h5tools_simple_prefix(stream, info, ctx, *curr_pos, 0); h5tools_str_reset(buffer); h5tools_str_append(buffer, "%s", VDS_ALL); @@ -2997,7 +2996,6 @@ h5tools_dump_dcpl(FILE *stream, const h5tool_format_t *info, off_t offset; /* offset of external file */ char f_name[256]; /* filter name */ char name[256]; /* external or virtual file name */ - char dsetname[256]; /* virtual datset name */ hsize_t chsize[64]; /* chunk size in elements */ hsize_t size; /* size of external file */ hsize_t storage_size; @@ -3190,6 +3188,7 @@ h5tools_dump_dcpl(FILE *stream, const h5tool_format_t *info, case H5D_VIRTUAL: { + char dsetname[256]; /* virtual datset name */ size_t vmaps; H5Pget_virtual_count(dcpl_id, &vmaps); @@ -3221,7 +3220,7 @@ h5tools_dump_dcpl(FILE *stream, const h5tool_format_t *info, ctx->indent_level++; - h5tools_print_virtual_selection(virtual_vspace, dcpl_id, next, stream, info, ctx, &buffer, &curr_pos, (size_t) ncols, (hsize_t) 0, (hsize_t) 0); + h5tools_print_virtual_selection(virtual_vspace, stream, info, ctx, &buffer, &curr_pos, (size_t) ncols); ctx->indent_level--; @@ -3242,8 +3241,12 @@ h5tools_dump_dcpl(FILE *stream, const h5tool_format_t *info, ctx->indent_level++; ssize_out = H5Pget_virtual_filename(dcpl_id, next, NULL, 0); + HDassert(ssize_out > 0); + HDassert((size_t)ssize_out < sizeof(name)); H5Pget_virtual_filename(dcpl_id, next, name, sizeof(name)); ssize_out = H5Pget_virtual_dsetname(dcpl_id, next, NULL, 0); + HDassert(ssize_out > 0); + HDassert((size_t)ssize_out < sizeof(name)); H5Pget_virtual_dsetname(dcpl_id, next, dsetname, sizeof(dsetname)); ctx->need_prefix = TRUE; @@ -3264,7 +3267,7 @@ h5tools_dump_dcpl(FILE *stream, const h5tool_format_t *info, h5tools_str_append(&buffer, "%s", h5tools_dump_header_format->virtualdatasetnameend); h5tools_render_element(stream, info, ctx, &buffer, &curr_pos, (size_t) ncols, (hsize_t) 0, (hsize_t) 0); - h5tools_print_virtual_selection(virtual_srcspace, dcpl_id, next, stream, info, ctx, &buffer, &curr_pos, (size_t) ncols, (hsize_t) 0, (hsize_t) 0); + h5tools_print_virtual_selection(virtual_srcspace, stream, info, ctx, &buffer, &curr_pos, (size_t) ncols); ctx->indent_level--; @@ -3324,8 +3327,8 @@ h5tools_dump_dcpl(FILE *stream, const h5tool_format_t *info, filtn = H5Pget_filter2(dcpl_id, (unsigned)i, &filt_flags, &cd_nelmts, cd_values, sizeof(f_name), f_name, NULL); - if (filtn < 0) - continue; /* nothing to print for invalid filter */ + if(filtn < 0) + continue; /* nothing to print for invalid filter */ ctx->need_prefix = TRUE; h5tools_simple_prefix(stream, info, ctx, curr_pos, 0); @@ -3417,12 +3420,6 @@ h5tools_dump_dcpl(FILE *stream, const h5tool_format_t *info, h5tools_render_element(stream, info, ctx, &buffer, &curr_pos, (size_t)ncols, (hsize_t)0, (hsize_t)0); break; default: - /* filters do not have to be available for showing registered filter info. - see HDFFV-8346 for details. --xcao@hdfgroup.org - if(H5Zfilter_avail(filtn)) - h5tools_str_append(&buffer, "%s %s", "USER_REGISTERED_FILTER", BEGIN); - else - */ h5tools_str_append(&buffer, "%s %s", "USER_DEFINED_FILTER", BEGIN); h5tools_render_element(stream, info, ctx, &buffer, &curr_pos, (size_t)ncols, (hsize_t)0, (hsize_t)0); diff --git a/tools/lib/h5tools_error.h b/tools/lib/h5tools_error.h index ae549fd..749157e 100644 --- a/tools/lib/h5tools_error.h +++ b/tools/lib/h5tools_error.h @@ -98,7 +98,7 @@ H5TOOLS_DLLVAR hid_t H5E_tools_min_id_g; * to the `catch_except' label, if we're not already past it. */ #define H5E_THROW(fail_value, min_id, str) { \ - HERROR(H5E_tools_g, min_id, str); \ + H5Epush2(H5tools_ERR_STACK_g, __FILE__, FUNC, __LINE__, H5tools_ERR_CLS_g, H5E_tools_g, min_id, str); \ H5_LEAVE(fail_value) \ } diff --git a/tools/lib/h5tools_str.c b/tools/lib/h5tools_str.c index c10f33b..bdb82a4 100644 --- a/tools/lib/h5tools_str.c +++ b/tools/lib/h5tools_str.c @@ -1456,23 +1456,22 @@ h5tools_str_is_zero(const void *_mem, size_t size) char * h5tools_str_replace ( const char *string, const char *substr, const char *replacement ) { - char *tok = NULL; - char *newstr = NULL; - char *oldstr = NULL; - char *head = NULL; - - if ( substr == NULL || replacement == NULL ) - return HDstrdup (string); - - newstr = HDstrdup (string); - head = newstr; - while ( (tok = HDstrstr ( head, substr ))){ - oldstr = newstr; - newstr = (char *)HDmalloc( HDstrlen( oldstr ) - HDstrlen( substr ) + HDstrlen( replacement ) + 1 ); + char *tok = NULL; + char *newstr = NULL; + char *oldstr = NULL; + char *head = NULL; + + if ( substr == NULL || replacement == NULL ) + return HDstrdup (string); + newstr = HDstrdup (string); + head = newstr; + while ( (tok = HDstrstr ( head, substr ))){ + oldstr = newstr; + newstr = (char *)HDmalloc( HDstrlen( oldstr ) - HDstrlen( substr ) + HDstrlen( replacement ) + 1 ); if ( newstr == NULL ){ - HDfree (oldstr); - return NULL; + HDfree (oldstr); + return NULL; } HDmemcpy ( newstr, oldstr, tok - oldstr ); HDmemcpy ( newstr + (tok - oldstr), replacement, HDstrlen ( replacement ) ); |