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* Hdf5 1 10 11 (#3555)Larry Knox2023-09-201-1/+1
| | | | | | | | | | | * Initial preparation of hdf5-1_10_11 release branch for HDF5 1.10.11 release: Updated configure.ac for release: switched configure default to production mode and disabled maintainer mode. Set HDF5_GENERATE_HEADERS to OFF in src/CMakeLists.txt. Generated release files including Makefile.ins with autogen.sh, autoconf 2.71 and automake 1.16.2 Incremented version to 1.10.11-2. * Update branch name in main.yml.
* sync cmake and examples changes (#3438)Allen Byrne2023-08-281-25/+25
| | | | | | | | | | | * sync cmake and examples changes * Add java lib changes * Update jave log files * Update java logger version * More logger version changes
* Misc normalization with develop (#3436)Dana Robinson2023-08-262-16/+76
| | | Mostly .github and config directories
* Merge changes from develop (#3239)Allen Byrne2023-07-183-41/+92
| | | | | | | * Merge changes from develop * Store name for last snapshot * Merge bbrelease into release
* Hdf5 1 10 release action (#3200)Allen Byrne2023-06-305-127/+239
| | | | * Update actions for release option, fix branch for daily build * Scheduled workflows run on latest commit on the develop
* Add missing space in zip command (#3170)Allen Byrne2023-06-221-1/+1
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* Update github files/workflow from develop (#3156)Allen Byrne2023-06-193-5/+32
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* Various merges from develop (#3135)Allen Byrne2023-06-193-36/+72
| | | | | | | | | * Merges from develop/1.14 * Fix doxygen warnings * Fix spelling * Fix doxygen ref * Add braces * Fix format * Remove unused file
* Update actions and change defaults of compression (fix vars) (#3044)Allen Byrne2023-06-068-16/+164
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* Add DT workflows and update windows preset (#2967)Allen Byrne2023-05-213-0/+350
| | | | | * Add DT workflows and update windows preset * Stagger check time
* Update action uses version (#2942)Allen Byrne2023-05-121-1/+1
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* Bring 'default' API value over from develop (#2588)Dana Robinson2023-03-181-1/+1
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* Minor merges to 1.10 (#2579)Larry Knox2023-03-181-0/+9
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * Elaborate how cd_values get stored (#2522) * Enclose MESG in do...while loop (#2576) Enclose MSG macro in a do...while loop * Add a clang-format comment about permissions (#2577) * Check for overflow when calculating on-disk attribute data size (#2459) * Remove duplicate code Signed-off-by: Egbert Eich <eich@suse.com> * Add test case for CVE-2021-37501 Bogus sizes in this test case causes the on-disk data size calculation in H5O__attr_decode() to overflow so that the calculated size becomes 0. This causes the read to overflow and h5dump to segfault. This test case was crafted, the test file was not directly generated by HDF5. Test case from: https://github.com/ST4RF4LL/Something_Found/blob/main/HDF5_v1.13.0_h5dump_heap_overflow.md --------- Co-authored-by: Mark (he/his) C. Miller <miller86@llnl.gov> Co-authored-by: glennsong09 <43005495+glennsong09@users.noreply.github.com> Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com> Co-authored-by: Egbert Eich <eich@suse.com>
* Add Glenn Song to the CODEOWNERS file (#2551) (#2557)Larry Knox2023-03-152-4/+4
| | | | | | | | | | | | | | * Add Glenn Song to the CODEOWNERS file (#2551) Also removes Ray Lu * Rename clang-format fix action (#2550) The clang-format fix and check actions have the same name. This also makes some small changes to the action's text fields. --------- Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
* Add concurrency option to cancel in-progress jobs (#2539) (#2556)Larry Knox2023-03-141-1/+6
| | | Co-authored-by: Scot Breitenfeld <brtnfld@hdfgroup.org>
* Fix 1.10 new codespell issues (#2521) (#2525)Larry Knox2023-03-091-2/+2
| | | | | | | | | | | | | * Fix new codespell issues (#2521) * Fix new codespell issues * Have codespell ignore ./config/sanitizer/sanitizers.cmake * Fix typo in genparser --------- Co-authored-by: Mark Kittisopikul <mkitti@users.noreply.github.com>
* 1.10 Add fetchcontent for compression libs and fix cmake config #2487 (#2494)Allen Byrne2023-02-222-2/+8
| | | | | * Add fetchcontent for compression libs and fix cmake config #2487 * Add CI test for FetchContent
* 1.10: Add spelling check to CI and fix errors. (#2442)Allen Byrne2023-02-162-1/+16
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * Update CI and support files to match latest from 1.14 * Correct spelling * More spelling corrections * spelling fixes in testpar * Fix spelling errors in tools * More tools spelling fixes * Spelling fixes for rest of tools and some src * Fix spelling errors in src files, pt 2 * Fix spelling in src pt3 * Fix spelling errors pt4 * Fix spelling errors pt5 * Spelling fix pt6 * fix spelling error examples * fix spelling in tests * fix spelling errors in test pt2 * Fix spelling errors in test pt3 * fix spelling in test pt4 * Fix spelling errors in hl * fix spelling errors in c++ * Spelling fixes for fortran * spelling fixes for bin and java * Add relative path * Change spelling action to use a file for list of ignore words * Fix spelling ignore list * remove unused file
* 1.10 h5repack should only print if verbose (#2275)Allen Byrne2023-02-132-2/+2
| | | | | --------- Co-authored-by: Larry Knox <lrknox@hdfgroup.org>
* Add szip/libaec to GitHub CI and fix warnings (#2438) (#2450)Dana Robinson2023-02-121-2/+10
| | | | | | | | szip (or libaec) is currently not tested in CI. This adds szip to the the Autotools GitHub CI actions on Linux when building with the Autotools. This PR also cleans up a few warnings that remained in the szip- related code so the -Werror check will pass.
* Bring `make install` GitHub action from develop (#2449)Dana Robinson2023-02-121-0/+14
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* Drop non-1.10 branches in main.yml (#2445)Dana Robinson2023-02-121-1/+1
| | | | | There's no reason to list develop, etc. in the list of branches where this flavor of main.yml applies. Those branches have their own main.yml files.
* 1.10: Brings the updated CI in from develop (#2312)Dana Robinson2022-12-162-391/+332
| | | | | | | | | | | | | | * Brings the updated CI in from develop Does not include the -Werror checks, changes 1.14 API to 1.12 where needed. * Fixes an API compatibility issue in the mirror VFD test * Committing clang-format changes * Removed pr-check.yml Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* 1.10 clang 13 format #1933 (#1940)Allen Byrne2022-07-292-8/+8
| | | | | * clang 13 format #1933 * Correct workflow
* Brings over minor changes in root, bin/, and release_docs (#1699)Dana Robinson2022-04-281-2/+9
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* Brings release timeline and github action changes from develop (#1597)Dana Robinson2022-04-061-0/+3
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* Brings MANIFEST removal from develop (#1596)Dana Robinson2022-04-062-2/+0
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* 1.10 change windows os from 2016 to latest (#1243)Allen Byrne2021-12-042-8/+8
| | | | | | | * change windows os from 2016 to latest * Upgrade the VS version used. * specify windows VS version
* Hdf5 1 10 merge fortran cmake changes from dev (#696)Allen Byrne2021-05-292-2/+2
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * HDFFV-10865 - merge from dev, HDFArray perf fix. * Remove duplicate setting * Whitespace changes after clang format * Undo version 11 clang format changes * Merge CMake changes from develop * test testing script merge from develop * Update supported platforms * PR#3 merge from develop * Merge gcc 10 diagnostics option from develop * Merge #318 OSX changes from develop * Merge small changes from develop * Minor non-space formatting changes * #386 copyright corrections for java folder * Merges from develop #358 patches from vtk #361 fix header guard spelling * Merge updates #358 patches from vtk #361 fix header guard spelling * format fix * Fix missing underscore and make H5public.h closer to dev * Merges from develop #340 clang -Wformat-security warnings #360 Fixed uninitialized warnings header guard underscore cleanup JNI cleanup * format alignment * Add missing test ref file * Merge #380 from develop * Finish java merges from develop * Fix java issues with tests and javadoc * Correct use of attribute access plist * Remove debug code * Remove unused variable * Change file access to read only for java tests * Split clang format operations. * More javadoc comments * Remove pre-split setting * format source * Change windows TS to use older VS. * Mostly all javadoc fixes, one argument rename. * synch file * Merge of long double fix and compiler flags * HDFFV-11229 merge changes from develop * HDFFV-11229 correct test script * HDFFV-11229 update autotools test script for two ref files * HDFFV-11229 merge dev changes for long double display in tools * Committing clang-format changes * minor whitespace * remove unneeded macro * Committing clang-format changes * Add "option" command for clang options * Rework CMake add_custom to use the BYPRODUCTS argument Update pkgconfig scripts for parallel builds. Fix install COPYING file reference. Remove unused round defines. Change CMake default setting of BUILD_CPP to off. * Fortran target depends * Remove incorrect source attribute * Revert define removal * printf specifiers and VS2015 min changes * Committing clang-format changes * Add time struct * TRILAB-227 and tools debug merges from develop * Merge various changes from dev * Issue #669 remove version from pkgcfg filename * remove version from h5cc script * doxygen changes merged from develop * Committing clang-format changes * Merge CMake fortran ninja changes from dev * Enable fortran to gcc yaml Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* 1.10 Change GITHUB actions Windows TS os (#459)Allen Byrne2021-03-102-4/+4
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * HDFFV-10865 - merge from dev, HDFArray perf fix. * Remove duplicate setting * Whitespace changes after clang format * Undo version 11 clang format changes * Merge CMake changes from develop * test testing script merge from develop * Update supported platforms * PR#3 merge from develop * Merge gcc 10 diagnostics option from develop * Merge #318 OSX changes from develop * Merge small changes from develop * Minor non-space formatting changes * #386 copyright corrections for java folder * Merges from develop #358 patches from vtk #361 fix header guard spelling * Merge updates #358 patches from vtk #361 fix header guard spelling * format fix * Fix missing underscore and make H5public.h closer to dev * Merges from develop #340 clang -Wformat-security warnings #360 Fixed uninitialized warnings header guard underscore cleanup JNI cleanup * format alignment * Add missing test ref file * Merge #380 from develop * Finish java merges from develop * Fix java issues with tests and javadoc * Correct use of attribute access plist * Remove debug code * Remove unused variable * Change file access to read only for java tests * Split clang format operations. * More javadoc comments * Remove pre-split setting * format source * Change windows TS to use older VS.
* 1 10 Fix java data export functions (#450)Allen Byrne2021-03-102-1/+27
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * HDFFV-10865 - merge from dev, HDFArray perf fix. * Remove duplicate setting * Whitespace changes after clang format * Undo version 11 clang format changes * Merge CMake changes from develop * test testing script merge from develop * Update supported platforms * PR#3 merge from develop * Merge gcc 10 diagnostics option from develop * Merge #318 OSX changes from develop * Merge small changes from develop * Minor non-space formatting changes * #386 copyright corrections for java folder * Merges from develop #358 patches from vtk #361 fix header guard spelling * Merge updates #358 patches from vtk #361 fix header guard spelling * format fix * Fix missing underscore and make H5public.h closer to dev * Merges from develop #340 clang -Wformat-security warnings #360 Fixed uninitialized warnings header guard underscore cleanup JNI cleanup * format alignment * Add missing test ref file * Merge #380 from develop * Finish java merges from develop * Fix java issues with tests and javadoc * Correct use of attribute access plist * Remove debug code * Remove unused variable * Change file access to read only for java tests * Split clang format operations. * More javadoc comments * Remove pre-split setting * format source
* 1 10 Whitespace changes after clang-format run (#287)Allen Byrne2021-01-293-9/+166
| | | | | | | | | * HDFFV-10865 - merge from dev, HDFArray perf fix. * Remove duplicate setting * Whitespace changes after clang format * Undo version 11 clang format changes
* hdf5 1 10 merge changes from dev (#107)Allen Byrne2020-11-202-0/+2
| | | | | * Merge changes from 1.12/dev * Add chkmanifest
* Merge from developAllen Byrne2020-10-073-7/+7
| | | | | | github updates bin scripts updates parser changes remove obsolete file
* Add option to github actionsAllen Byrne2020-10-012-2/+9
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* Merge of clang-format changes from developAllen Byrne2020-09-303-4/+208
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* Examples DESTDIR and github actionAllen Byrne2020-07-211-2/+2
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* disable pr action and enable fail fastAllen Byrne2020-05-081-3/+3
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* Add github actions file and cleanup javaAllen Byrne2020-05-061-0/+80
generated by cgit v0.12 at 2024-07-17 07:44:34 (GMT)