| Commit message (Collapse) | Author | Age | Files | Lines |
| |
|
|
|
|
|
|
|
|
|
|
|
|
| |
Description: A new exception handler for datatype conversion(set through
H5Pset_type_conv_cb) to replace the old overflow callback function(set
through H5Tset_overflow). This new handler can deal with overflow, precision
loss and fraction truncate during datatype conversion.
Platforms tested: h5committest
Misc. update: release_docs
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
Undo the mysterous changes.
Description:
Somehow something changed this file during snapshot release.
Undo the change.
Platforms tested:
No test since it is a simple editing.
Misc. update:
|
|
|
|
| |
Correct typo in H5Pcreate() information
|
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
Code cleanup
Description:
Reduce warnings w/PC-Lint in various ways
Platforms tested:
PC-Lint
too minor to require h5committest
Misc. update:
|
|
|
|
|
|
|
|
|
|
|
| |
Code cleanup
Description:
Reduce # of warnings with PC-Lint
Platforms tested:
PC-LINT
Too minor to require h5committest
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
bug fix
Description:
szip dll path was wrong at debug version
Since h5dump --xml thlink.h5 and h5dump --xml tmany.h5 failed for debugging due to
string allocation violation in h5dump.c; we turned off these two tests
for debug testing.
Solution:
Add a temporary batch file called dumptstdebug.bat for the time being.
Platforms tested:
windows 2000 VS 6.0.
Misc. update:
|
|
|
|
|
|
|
|
|
|
|
| |
Code cleanup
Description:
Run lint on module
Platforms tested:
PC-Lint
Too minor to require h5committest
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
bug fix
Description:
h5repack and h5repacktst are not included in all dependencies.
unresolved externals in h5repack and h5repacktst.
Solution:
Added all dependencies on h5repack and h5repacktst.
Added h5repack and h5repacktst dependencies on toolslib.
h5repack and h5repacktst settings/Link/Object/library modules: added zlib.lib szib.lib.
Platforms tested:
Windows XP MS VS 6.0
Misc. update:
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
Code optimization
Description:
Instead of dynamicly allocating various arrays for various pieces of
information about a selection or selection iterator, just use fixed size
array of size H5S_MAX_RANK (as the rest of the library does).
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.9 (sleipnir)
h5committest
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
Code optimization
Description:
Make calculation of "all" selection sequence length information more
efficient.
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.9 (sleipnir)
h5comittest
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
Purpose: Maintenance
Description: h5dwrite/read_f and h5awrite_read_f functions were overloaded
with dims argument being of type INTEGER and INTEGER(HSIZE_T).
We promised to remove overloading in 1.4 release. It was
removed from documentation but not from the source code.
Solution: Finish code cleanup.
Platforms tested: Solaris 2.7 32 and 64 bit, and copper with --enable-
parallel. Windows are broken, so Kent and Xuan
will test it with their changes later.
Misc. update:
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
Windows update including project update, H5Tinit.c update.
Description:
H5detect.c has been changed in UNIX, H5Tinit.c needs to be updated.
Several test files have been re-arranged.
Solution:
Fix them
Platforms tested:
windows xp
Misc. update:
|
|
|
|
|
|
|
|
|
|
|
|
| |
Code optimization
Description:
Avoid clearing the error stack unless necessary.
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.9 (sleipnir)
too minor to require h5committest
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
Bug fix.
Description:
The data verification code didn't work. Also numerous minor bugs.
Solution:
Re-wrote data write and verification code. In particular, I
modified the verification code so it actually verifies data.
In the future, this test should be modified so it exercises
object deletes and chunk I/O.
Platforms tested:
h5committested
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
Checkpoint checkin of FP bug fixes. FP is still quite
buggy, but I must go deal with other matters.
Description:
Fixed two major bugs:
1) H5FPserver.c was clobbering meta data in its care.
2) H5FPserver.c was allocating the same space multiple
times, causing both data and meta data corruption.
Also made minor fixes, added debugging code, and familiarized
myself with the FP code.
All development work with FP enabled was done on Eirene.
On this platform, FP now passes its test reliably with
up to 9 processes. At 10 processes it seg faults every
time. I haven't looked into this issue.
There are also several known locking bugs which have to
be fixed. However, they are of sufficiently low probability
that I didn't bother with them on this pass.
FP has not been tested with deletions -- this should be
done.
Also, need to test FP chunked I/O.
Solution:
1) Modified cache in H5FPserver.c to merge changes correctly.
Found and fixed a bug in H5TB.c in passing.
2) Multiple space allocation was caused by a race condition
with set eoa requests.
Most of these eoa requests appeared to be superfluous, so
I deleted them.
Those issued during the superblock read seemed necessary,
so I inserted a barrier at the end of the superblock read,
to prevent races with allocations.
Platforms tested:
h5committested
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
bug fix
Description:
the "all" project did not include h5repack
Solution:
Platforms tested:
Misc. update:
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
Description:
Fixed bug in H5TB_less(). It was returning the next largest node,
instead of the next smallest as advertised.
Added comments warning that H5TB_rem()s will occasionally delete a
node other than the one provided in its argument list.
Solution:
It was sufficient t invert two comparisons in H5TB_less().
Platforms tested:
h5committested
|
|
|
|
|
|
|
|
|
|
|
| |
Bug fix.
Description:
LOGFILE was showing both hostname and srcdirname when srcdirname is used.
Fixed it.
Platforms tested:
Tested in LANL QSC.
|
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
Code cleanup
Description:
Clean up lots of warnings based on those reported from the SGI compilers
as well as gcc.
Platforms tested:
SGI O3900, IRIX64 6.5 (Cheryl's SGI machine)
FreeBSD 4.9 (sleipnir) w/ & w/o parallel
h5committest
|
|
|
|
|
|
|
|
|
|
|
|
| |
Code cleanup
Description:
Regenerated with older version of dataspace information, since these files
don't contain null dataspaces.
Platforms tested:
FreeBSD 4.9 (sleipnir)
h5committest
|
|
|
|
|
|
|
|
|
|
|
| |
Code cleanup
Description:
Added more tests
Platforms tested:
FreeBSD 4.9 (sleipnir)
h5committest
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
Code cleanup
Description:
Update null dataspace changes to try to write older version of dataspace
information whenever possible.
Refactor common code to only one location.
Allow I/O operations to succeed on null dataspaces.
Platforms tested:
FreeBSD 4.9 (sleipnir)
h5committest
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
Bug fix.
Description:
Allow the recent changes to support correct srcdir operation to also work
when building in place.
Platforms tested:
FreeBSD 4.9 (sleipnir)
h5committest
Misc. update:
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
Code optimization
Description:
Instead of re-initializing the default stride & block arrays to have values
of '1' in each position each time we perform a hyperslab selection, create
static constant arrays with '1's in them.
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.9 (sleipnir)
too minor to require h5committest
|
|
|
|
|
|
|
|
|
|
|
|
| |
Code optimization
Description:
Don't copy hyperslab span information as much.
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.9 (sleipnir)
too minor to require h5committest
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
Bug fix.
Description:
Not all machines (like Sun and AIX) support fabsl() and fabsf() used
in test/dtypes.c. Changed the coding to use macro names HDfabsl and
HDfabsf. Also set the two macros to use ABS for now so that they will
work for all machines. (need more portable fixes which would involve
configure.)
Platforms tested:
h5committested. (also tested in LANL QSC and Theta).
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
Code optimization
Description:
Compute value for array instead of using memset(), since we are looping
through the array indices anyway.
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.9 (sleipnir)
too minor to require h5committest
|
|
|
|
|
|
|
|
|
|
|
|
| |
Code optimization
Description:
Eliminate memset() calls to clear structures that we completely initialize
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.9 (sleipnir)
too minor to require h5committest
|
|
|
|
|
|
|
|
|
|
|
|
| |
Code optimization
Description:
Remove redundant function call by re-using value we already know.
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.9 (sleipnir)
too minor to require h5committest
|
|
|
|
|
|
|
|
|
|
|
|
| |
Updated with long double to double failure.
Description:
Solution:
Platforms tested:
Misc. update:
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
bug fix.
Description:
On LANL QSC, test/dtypes "sw long double -> double" had failed when the
long double values were too small, smaller than the minimum double normalized
floating number. The hw in QSC converts them mostly to 0 but occasionally,
it converts to the some non-zero values which are still <= the minimum
double normalized number. But the conversion verification did not like
them and flagged them as errors.
Solution:
Added code to check if the src value is already smaller than the minimum
number the float class can hold. When that happens and if both hw and sw
conversion results are <= the minimum number, then accepts them as okay
because if the src is smaller than the dst minimum number, an underflow
has occured.
Platforms tested:
Tested in LANL QSC and Theta.
|
|
|
|
|
|
|
|
|
|
|
|
| |
Updated.
Description:
Solution:
Platforms tested:
Misc. update:
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
feature
Description:
H5check_version will print warning messages if the version does not
match or if the lib version string is not consistent, even when
$HDF5_DISABLE_VERSION_CHECK is set to 1. This will mess up
tests that try to match output.
Changed it so that if $HDF5_DISABLE_VERSION_CHECK is set to 2, no
warning about version mismatch is printed.
The lib version string warning is suppressed if $HDF5_DISABLE_VERSION_CHECK
is set to any non-zero value.
Platforms tested:
Tested in sol only but pretty comprehensive to make the warnings do get
suppressed.
Misc. update:
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
bug fix
Description:
the routine for reading the options from a file had the "old" parse syntax
Solution:
Platforms tested:
linux
solaris
AIX
Misc. update:
|
|
|
|
|
|
|
|
| |
Description: This test script put executable program in hdf5/test/testfiles where
output HDF5 file was created. It might cause conflict when multiple buildings happen.
Platforms tested: RH 8(fuss)
|
| |
|
| |
|
|
|
|
|
|
|
|
| |
Description: Add more tests for bittests.c to check bit operations like H5S_bit_shift,
H5S_bit_inc, H5S_bit_dec, H5S_bit_neg.
Platforms tested: h5committest
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
Code optimization
Description:
Eliminate memory allocations for I/O vectors when using the default
vector size.
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.9 (sleipnir)
too minor to require h5committest
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
Bug fix.
Description:
Temporary output files were created in the source directory.
If multiple build/tests using the same source directory occur
at the same time, they would conflict because of the same file
names.
Solution:
Changed it to create temporary output file in the current build
directory.
Platforms tested:
sol.
Misc. update:
|
|
|
|
|
|
|
|
| |
Description: H5T_bit_shift wasn't general enough to handle arbitory start, length.
Solution: Make it be so.
Platforms tested: h5committest
|
|
|
|
|
|
|
|
|
|
|
|
| |
update toolslib windows project
Description:
Solution:
Platforms tested:
Misc. update:
|
|
|
|
|
|
|
|
|
|
|
|
| |
Code optimization
Description:
Remove another dataspace copy, in certain circumstances.
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.9 (sleipnir)
too minor to require h5committest
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
Code optimization
Description:
Remove a memcpy() from a commonly called routine and replace a multiplication
with a series of additions.
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.9 (sleipnir)
too minor to require h5committest
|
|
|
|
|
|
|
|
|
|
|
|
| |
Code optimization
Description:
Avoid another extraneous dataspace copy.
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.9 (sleipnir) w/parallel
too minor to require h5committest
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
Code optimization
Description:
Change algorithm to directly use coordinates describing a chunk's position
in a dataspace instead of creating a dataspace with the chunk's position
selected. This reduces the number of copies of dataspaces we need to keep
around.
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.9 (sleipnir) w/parallel
too minor to require h5committest
|
|
|
|
|
|
|
|
| |
Description: Variable name "class" conflicts with C++ key word.
Solution: changed it to "type"
Platforms tested: RH 8
|