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* [svn-r17437] Snapshot version 1.8 release 3 (snap8)Larry Knox2009-08-307-22/+22
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* [svn-r17433] Description:Quincey Koziol2009-08-271-16/+6
| | | | | | | | | | Bring r17432 from trunk to 1.8 branch: Simplify dataspace cleanup code. Tested on: FreeBSD/32 6.3 (duty) in debug mode (h5committested on trunk)
* [svn-r17431] Description:Quincey Koziol2009-08-276-266/+1
| | | | | | | | | | Bring r17429 from trunk to 1.8 branch: Remove unnecessary v2 B-tree 'retrieve' callback from v2 B-tree clients. Tested on: FreeBSD/32 6.3 (duty) in debug mode (h5committest performed on trunk)
* [svn-r17419] Maintenance: Restored the content of the file. Checked that fileElena Pourmal2009-08-251-1/+30
| | | | is modified correctly by bin/h5vers and bin/release scripts.
* [svn-r17415] Description:Quincey Koziol2009-08-2415-445/+355
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bring r17408, 17411, 17412, 17413 & 17414 from trunk back to 1.8 branch: r17408: Move flush operation on mounted file hierarchy into H5Fmount module. r17411: Make H5AC_flush just flush the cache and make H5AC_dest perform the proper parallel synchronization before destroying the cache. Also, further discriminate between 'closing' and 'non-closing' actions in H5F_flush. r17412: Seperate 'flush' functionality from 'destroy' functionality at the H5F level also. r17413: Remove vestigial intermediate routine for flushing file and move it into API routine. Also, remove private, unused (now) 'H5F_FLUSH_DOWN' symbol from public header file. r17414: Flush the core VFD's buffer before closing the file, also flush the metadata accumulator before reseting it. Write the driver info message out in the superblock flush routine more directly, instead of using wrapper routine, since the wrapper routine won't work when the superblock is being shutdown. Tested on: FreeBSD/32 6.3 (duty) in debug mode (h5committest performed on trunk)
* [svn-r17410] Snapshot version 1.8 release 3 (snap7)Larry Knox2009-08-237-22/+22
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* [svn-r17406] I added a condition check for the conversion from unsigned to ↵Raymond Lu2009-08-211-0/+2
| | | | | | | | | float. When the configure detects the conversion working, a macro is set. If there's problem with this conversion like Pathscale compiler, skip the test. Tested on jam. Need to verify it on pathscale machine.
* [svn-r17404] Description:Quincey Koziol2009-08-2110-63/+53
| | | | | | | | | | | | | | | | | | | | | | Bring r17402 & r17403 from trunk to 1.8 branch: r17402: Switch from using a 'flags' parameter to the flush routine(s), to just using a single 'closing' boolean parameter, since that's all we're doing with the flags anyway and this makes things more obvious. r17403: Eliminate 'closing' flag to dataset flush routine, since all cached dataset information has already been flushed when a file is closed and the datasets themselves will be closed (and the dataset caches destroyed). Skip calling more flush routines when the file is closing, in preparation for eventual separation of the 'flush' concept from the 'shutdown the cache' concept. Tested on: FreeBSD/32 6.3 (duty) in debug mode (h5committest performed on trunk)
* [svn-r17401] Description:Quincey Koziol2009-08-213-43/+77
| | | | | | | | | | | | | | | Bring r17400 from trunk to 1.8 branch: Refactor H5F_flush into two routines, one which handles the recursion/ iteration necessary to handle mounted files; and one which just handles the flush operation for a single file. Also, remove H5F_FLUSH_INVALIDATE and switch all code to depend on H5F_FLUSH_CLOSING. Tested on: FreeBSD/32 6.3 (duty) in debug mode (h5committested on trunk)
* [svn-r17399] Description:Quincey Koziol2009-08-2010-122/+126
| | | | | | | | | | | | | Bring r17393 and r17398 from trunk to 1.8 branch: Bring back more changes from the file free space branch to the trunk. (17393) First set of changes to move VFD 'truncate' call out of H5F_flush and defer it until the file is closed. (17398) Tested on: FreeBSD/32 6.3 (duty) in debug mode (h5committested on trunk)
* [svn-r17396] Added a comment to explain what "dst" and "ans" are when errors ↵Raymond Lu2009-08-201-0/+3
| | | | | | happen. Tested on jam - simple change.
* [svn-r17395] Description:Quincey Koziol2009-08-201-1/+4
| | | | Update release notes with note about fixing Bz#1473.
* [svn-r17389] Description:Quincey Koziol2009-08-202-71/+79
| | | | | | | | | | | | | | Bring r17388 from trunk to 1.8 branch: Correct error in freespace test which was relying on free space section to be valid after the library had taken ownership of it (and therefore could free it). Also correct some checking for return values of H5FS internal routines Tested on: FreeBSD/32 6.3 (duty) in debug mode (h5committest performed on trunk)
* [svn-r17387] I added a detection for the correctness of converting from ↵Raymond Lu2009-08-196-9/+172
| | | | | | | | | | unsigned long to float in the configure.in. The Pathscale compiler on Sandia's Linux machine misinterprets the values of unsigned long as negative during the conversion to float, when the first bit of unsigned long is on. Tested on jam. Need to test it on Sandia's machine.
* [svn-r17386] Added some comments.Raymond Lu2009-08-191-0/+6
| | | | No test needed.
* [svn-r17384] Corrected the path.Raymond Lu2009-08-191-2/+3
| | | | Not tested yet.
* [svn-r17383] Added UNC external links tests for windows only.Allen Byrne2009-08-191-1/+270
| | | | Tested: windows
* [svn-r17380] Description:Quincey Koziol2009-08-184-50/+43
| | | | | | | | | | | | | Bring r17376 from trunk to 1.8 branch: Make similar change to windows VFD as sec2 VFD, when converting from a family file to a single file. Tweak file sizes expected for parallel tests. Tested on: FreeBSD/32 6.3 (duty) w/debug (h5committested on trunk)
* [svn-r17378] Added new file to library project file, H5Fsuper_cache.c.Allen Byrne2009-08-1811-20122/+71
| | | | | | Cleaned project files of extraneous project info that should not have been used. The info was removed from individual files. Tested: windows
* [svn-r17375] Added Windows version of HDsleep macro needed for a test in ↵Allen Byrne2009-08-181-0/+1
| | | | | | test/tfile.c. Tested: windows
* [svn-r17374] Description:Quincey Koziol2009-08-1831-1186/+1660
| | | | | | | | | | | Bring r17365 from trunk to 1.8 branch: Final merge of changes from sblock_mdc branch back to trunk. The superblock is now managed by the metadata cache. Tested on: FreeBSD/32 6.3 (duty) in debug mode (h5committest performed on trunk)
* [svn-r17370] Added h5dump/h5ls display buffer resize fixed in tools library.Allen Byrne2009-08-171-0/+2
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* [svn-r17368] Snapshot version 1.8 release 3 (snap6)Larry Knox2009-08-167-22/+22
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* [svn-r17359] Description:Quincey Koziol2009-08-146-73/+102
| | | | | | | | | | Bring r17336 from trunk to 1.8 branch: Bring more changes from the file_free_space branch into the trunk. Tested on: FreeBSD/32 6.3 (duty) in debug mode (h5committested on trunk)
* [svn-r17354] Description:Quincey Koziol2009-08-1311-26/+54
| | | | | | | | | | | | | Bring r17351 from trunk to 1.8 branch: Clean up code (to align w/future sblock_mdc branch changes), tweak tests for [slightly] easier debugging, fix memory leak when copying chunked datasets with I/O filters, fix memory leak of free space section when it was exactly the right size to use for extending an existing block in the file. Tested on: FreeBSD/32 6.3 (duty) in debug mode (h5committest performed on trunk)
* [svn-r17350] I added the simple test for h5jam and the build for h5repart.Raymond Lu2009-08-132-0/+41
| | | | Not tested yet.
* [svn-r17342] Description:Quincey Koziol2009-08-126-106/+8
| | | | | | | | | Bring r17341 from trunk to 1.8 branch: Tweaks to comments, to better align with changes on sblock_mdc branch Tested on: Just eyeballed, only tweaks to comments
* [svn-r17339] Snapshot version 1.8 release 3 (snap5)Larry Knox2009-08-128-52/+52
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* [svn-r17332] Description:Quincey Koziol2009-08-114-28/+98
| | | | | | | | | | Bring r17331 from trunk to 1.8 branch: Bring back more changes from file free space branch. Tested on: FreeBSD/32 6.3 (duty) in debug mode (h5committest performed on trunk)
* [svn-r17327] Added the recognization of PathScale compilers. Also added the ↵Albert Cheng2009-08-111-2/+9
| | | | | | known problem of PathScale MPI failure when accessing a Panasas file system.
* [svn-r17325] Description:Quincey Koziol2009-08-116-193/+381
| | | | | | | | | | Bring r17324 from trunk to 1.8 branch: Bring more improvements/changes back from file_free_space branch Tested on: FreeBSD/32 6.3 (duty) in debug mode (h5committest performed on trunk)
* [svn-r17320] Description:Quincey Koziol2009-08-117-109/+273
| | | | | | | | | | | Bring r17319 from trunk to 1.8 branch: Bring more superblock manipulation & aggregator changes from file free space branch. Tested on: FreeBSD/32 6.3 (duty) in debug mode (h5committest performed on trunk)
* [svn-r17317] Did some code cleanup.Albert Cheng2009-08-112-6/+8
| | | | | | | | | | t_file.c: replace the old variable, color, with a more meaningfule name of is_old. t_mpi.c: use the official mpi_file_delete, instead of remove, to delete a file in MPI environment. Tested: Only jam in parallel as changes are trivial.
* [svn-r17314] Description:Quincey Koziol2009-08-1049-276/+258
| | | | | | | | | | | | | | | | | | | | | | Bring r17313 from trunk to 1.8 branch: Bring back various minor code cleanups from the file free space branch Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/Intel compilers w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.5.8 (amazon) in debug mode Mac OS X/32 10.5.8 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r17303] Description:Quincey Koziol2009-08-041-6/+4
| | | | | | | | | | | Bring r17302 from trunk to 1.8 branch: Correct errors on machines (like Windows) that don't have C99 named initializer support. Tested on: Mac OS X/32 10.5.7 (duty) Windows build (by Allen)
* [svn-r17298] Specified HDTarray_create and HDCreate as HDTarray_create2 and ↵Allen Byrne2009-08-041-2/+2
| | | | | | HDCreate2 in gent_array8 function as was done in other gent_arrayX functions. Fixes 1.6 compatibility mode argument errors. Tested: linux
* [svn-r17294] Updated for newly added files.Albert Cheng2009-08-011-0/+2
| | | | Tested by bin/chkmanifest.
* [svn-r17290] Added test targeted for bug 1520, which was fixed last week. ↵Allen Byrne2009-07-314-37/+71
| | | | | | The test generates an array datatype of ints larger than the display buffer. The bug was exposed when the buffer was reallocated. Tested: linux
* [svn-r17288] Added the two infinity tests to the windows batch script to ↵Allen Byrne2009-07-311-0/+8
| | | | match the linux test script.
* [svn-r17286] Description:Quincey Koziol2009-07-313-14/+7
| | | | | | | | | | | Bring r17284 from trunk to 1.8 branch: Remove unneccessary dest. layout information from chunked dataset copying routine. Tested on: Mac OS X/32 10.5.7 (amazon) debug & production h5committested on trunk
* [svn-r17282] Description:Quincey Koziol2009-07-3114-110/+122
| | | | | | | | | | | Bring r17281 from trunk to 1.8 branch: Further refactoring of the dataset layout information, to separate the storage information from the layout info. Tested on: Mac OS X/32 10.5.7 (amazon) debug & production h5committested on trunk
* [svn-r17277] Description:Quincey Koziol2009-07-3017-561/+615
| | | | | | | | Bring r17275 and r17276 from trunk to 1.8 branch. Tested on: Mac OS X/32 10.5.7 (amazon) w/debug & production (too minor to require h5committest)
* [svn-r17274] Description:Quincey Koziol2009-07-308-30/+25
| | | | | | | | | | | Bring r17272 from trunk to 1.8 branch: Finish pushing contiguous storage size from 'layout' into 'storage" data structure. Tested on: Mac OS X/32 10.5.7 (amazon) w/debug & production Too minor to require h5committest
* [svn-r17271] Description:Quincey Koziol2009-07-305-72/+71
| | | | | | | | | | | Bring r17269 from trunk to 1.8 branch: Refactor how serialized size of layout message is computed, slightly. Tested on: Mac OS X/32 10.5.7 (amazon) debug & production FreeBSD/32 6.3 (duty) debug Too minor to require h5committest
* [svn-r17266] Description:Quincey Koziol2009-07-3026-378/+380
| | | | | | | | | Clean up various compiler warnings from IRIX64 build Tested on: Mac OS X/32 (amazon) debug & production (yes, I know it's not an IRIX64 system :-) Too minor to require h5committest
* [svn-r17265] Description:Quincey Koziol2009-07-294-30/+23
| | | | | | | | | | | | Bring r17264 from trunk to 1.8 branch: Refine how we store the chunk index address in the layout storage structure. Tested on: FreeBSD/32 6.3 (duty) debug Mac OS X/32 10.5.7 (amazon) debug & production Too minor to require h5committest
* [svn-r17262] Description:Quincey Koziol2009-07-298-127/+157
| | | | | | | | | | | Bring r17261 from trunk to 1.8 branch: Refactoring dataset layout information to segregate the constant items from the variable items (at least from a storage standpoint). Tested on: FreeBSD/32 6.3 (duty) (h5committest performed on trunk)
* [svn-r17260] add test cases for h5diffPeter Cao2009-07-291-0/+2
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* [svn-r17258] Added new file, H5Dlayout.c to project files.Allen Byrne2009-07-284-0/+12
| | | | Tested XP32 VS2005
* [svn-r17255] Fixed Bug 1563 - h5diff and InfinityPeter Cao2009-07-287-8/+45
| | | | Added test cases.
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