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* [svn-r14860] Description:Quincey Koziol2008-04-2431-5911/+5242
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Omnibus raw data I/O revisions, with wide-ranging changes and refactoring, in order to prepare for implementing "fast append" feature. These changes remove the majority of the code duplication for raw data I/O which has crept in over the last ten years and introduces a more object- oriented design for operating on different types of dataset storage. Chunked storage no longer has it's own I/O routines, it is now handled as either contiguous (if chunk is not pulled into the cache) or compact (if the chunk is cached in memory). No bug or feature changes, at least intentionally... :-) Tested on: FreeBSD/32 6.2 (duty) in debug mode FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Mac OS X/32 10.5.2 (amazon) in debug mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode
* [svn-r14857] Purpose: Fix typo in Windows test scriptScott Wegner2008-04-211-2/+2
| | | | | | | | Description: A small typo in the main Windows test script was causing the C++ library tests not to run by default. Tested: VS2005 on WinXP x64
* [svn-r14855] Purpose: Fix error message when with Windows pthreadsScott Wegner2008-04-211-27/+31
| | | | | | | | Description: When building HDF5 with thread safety on Windows, the err_compat test was failing because our output was being parsed incorrectly. Rather than having a thread number in the error stack trace, there will be the string "some thread: no way to know the thread (IDs): from pthread on windows:". This checkin now takes this into account, and modifies the output accordingly. Tested: VS2005 on WinXP with Pthreads
* [svn-r14854] Purpose: Remove many spurious compiler warnings in Visual StudioScott Wegner2008-04-21184-2551/+2716
| | | | | | | | | | Description: On Windows, many POSIX functions have been replaced by a similarly-named function with some additional security-checking. Visual Studio issues a warning each time the POSIX version is used, recommending that we replace it with the new version. This results in thousands of errors when building the HDF5 library. This checkin adds a Visual Studio "Property Sheet", which has been applied to all library projects, and defines a number of preprocessors to suppress these warnings. The warnings have been disabled only in Visual Studio 2005 project files, as VS.NET doesn't support property sheets. Tested: VS2005 on WinXP
* [svn-r14853] Purpose: Comment-out 2 windows-specific testsScott Wegner2008-04-211-2/+2
| | | | | | | | Description: Vailin has been working on some new tests for converting Windows paths. She found a bug that is making these two tests fail, but didn't have time to fix it. We've commented out the two tests until she has time to fix the bug. This won't affect other platforms because it's Windows-specific code. Tested: VS2005 on WinXP
* [svn-r14852] Purpose: Update bug fixesBinh-Minh Ribler2008-04-211-0/+8
| | | | | Description: Added notes about fixes on bugzillas 1045 and 1056.
* [svn-r14850] Purpose: Fixed bugsBinh-Minh Ribler2008-04-202-24/+40
| | | | | | | | | | | | | | | | Description: - Revised Attribute::write and Attribute::read wrappers to handle memory allocation/deallocation properly. (bugzilla 1045) - Changed free() to H5Dfree(), also needed H5private.h - Corrected quite a few typos in documenting! Platforms tested: SunOS 5.10 (linew) Linux 2.6 (kagiso) FreeBSD (duty) - there was something wrong in the C tests for makecheck hung quite a long time; I went ahead with makecheck just in c++ dir, since the changes didn't effect the C tests. I'll keep an eye on the tests tonight...
* [svn-r14849] Snapshot version 1.9 release 3HDF Tester2008-04-208-19/+19
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* [svn-r14848] Fixed a bug in the external link test for windows.Vailin Choi2008-04-181-1/+1
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* [svn-r14847] 1. test/links.c: add tests specific for windowsVailin Choi2008-04-163-59/+649
| | | | | | | | | remove HDputenv() from external_link_env() test (will add script later to set HDF5_EXT_PREFIX for running the test) modify and add more comments 2. src/H5private.h: remove #define for HDputenv() Tested on kagiso, linew and smirom.
* [svn-r14846] Purpose: Update MANIFEST for last commitScott Wegner2008-04-141-0/+1
| | | | | | | | Description: Add ./windows/hdf5build_examples.BAT to MANIFEST Tested: chkmanifest on kagiso
* [svn-r14845] Purpose: Add new Windows batch script for building example projectsScott Wegner2008-04-141-0/+221
| | | | | | | | | | Description: Just as we have scripts for building and testing the HDF5 library on Windows, hdf5build_examples.BAT is a new script for building HDF5 example projects on Windows. This is especially useful for our new Windows Daily Tests, to test our examples automatically as well. Eventually, we will have hdf5check_examples.BAT and hdf5bt_examples.BAT to test our examples as well. Tested: VS2005 on WinXP
* [svn-r14843] Purpose: Fix link input in Windows HL Fortran examplesScott Wegner2008-04-143-31/+33
| | | | | | | | | | Description: Previously, our Windows projects for HL Fortran examples were using outdated library names for our cstub code. As a result, they wouldn't build correctly. This checkin brings them up-to-date. Also, add hdf5_hl.lib as a dependency to hdf5_hl_fortran.lib. This goes un-noticed when building the complete VS solution, but should be required when only building hdf5_hl_fortran.lib Tested: VS2005 on WinXP
* [svn-r14841] Purpose: Fix Windows Fortran examples runtime librariesScott Wegner2008-04-1428-532/+532
| | | | | | | | | | Description: In the Windows Fortran example projects, the runtime library used for linking static-debug version was set incorrectly. This was a result of the project being upgraded from VS6 where we used Single-threaded libraries. Those libraries are no longer supported, so we use [Debug] Multithreaded [DLL] now instead. Note that this also needs to be updated in the VS.NET project files-- I will make those changes shortly. Tested: VS2005 on WinXP
* [svn-r14839] Purpose: Add new Windows macro for links testScott Wegner2008-04-141-0/+4
| | | | | | | | Description: Many new path-specific tests have been added via the "links" test. Because Windows' path format is non-standard, we need a special macro defined to handle it specially. Note that 2 tests still fail with this macro defined, but it should be fixed soon. Tested: VS2005 on WinXP
* [svn-r14838] Purpose: Remove ohdr_gentst from Windows projectsScott Wegner2008-04-146-671/+0
| | | | | | | | Description: The ohdr_gentst project exists in order to re-create test input files that are distributed with the source. These projects aren't built by default on most platforms, and the source isn't distributed in release builds. To avoid confusion and bloat, we remove the Windows version of this project. Tested: None, only removed
* [svn-r14836] Purpose: Remove English-specific code from Windows test scriptsScott Wegner2008-04-1411-18/+19
| | | | | | | | | | | Description: In previous versions of Windows, the builtin 'FC' command (diff equivalent) didn't return proper exit status. As a work-around, we parsed the message returned to check status. This relies on English return messages. In current Windows XP and Windows Vista, FC will return exit status as expected, so we can remove this workaround. Older platforms where we would need this workaround are no longer supported. Tested: VS2005 on Windows XP Small test on Windows Vista
* [svn-r14832] Snapshot version 1.9 release 2HDF Tester2008-04-137-18/+18
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* [svn-r14831] Revise file of the serial benchmarking tool.Christian Chilan2008-04-121-9/+6
| | | | Tested on kagiso, smirom, linew, and tg-login.
* [svn-r14829] Revised files of the serial benchmarking tool.Christian Chilan2008-04-112-8/+6
| | | | Tested on kagiso, smirom, and linew.
* [svn-r14828] Included files of the serial benchmarking tool.Christian Chilan2008-04-111-0/+7
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* [svn-r14827] Makefiles configured to build and test the serial benchmarking ↵Christian Chilan2008-04-102-7/+24
| | | | | | tool. Tested on kagiso, smirom, and linew.
* [svn-r14826] Files for the serial benchmarking tool, h5perf_serial.Christian Chilan2008-04-105-0/+4132
| | | | Tested on kagiso, smirom, and linew.
* [svn-r14825] Files for the serial benchmarking tool, h5perf_serial.Christian Chilan2008-04-102-0/+273
| | | | Tested on kagiso, smirom, and linew.
* [svn-r14822] 1. src/H5private.h: fixed a bug in CHECK_ABSOLUTE() for windows.Vailin Choi2008-04-092-14/+6
| | | | 2. test/links.c: fixed one external link test to be the same as in 1.8.
* [svn-r14821] Having this signature Pedro Vicente Nunes2008-04-081-1/+1
| | | | | | | | | | | | | | | | H5_DLL herr_t H5_build_extpath(const char *, char **/*out*/); makes this stupid warning in windows that gets repeated in every source file c:\_pvn\hdf5\src\h5private.h(958) : warning C4138: '*/' found outside of comment changed signature to H5_DLL herr_t H5_build_extpath(const char *, char ** /*out*/ ); compiler is happy now tested: windows, linux
* [svn-r14819] Purpose: Update MANIFEST for previous checkinScott Wegner2008-04-081-0/+4
| | | | | Tested: chkmanifest on smirom
* [svn-r14818] updated commentsPedro Vicente Nunes2008-04-081-4/+4
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* [svn-r14817] Purpose: Add new Windows project chunk_info[dll]Scott Wegner2008-04-087-0/+1076
| | | | | | | | | Description: A new source file has been added, ./test/chunk_info.c. As a result, we need to add new projects for Windows. This includes projects for VS2005 on VNET. Tested: VS2005 on WinXP VNET on WinXP
* [svn-r14816] updated commentsPedro Vicente Nunes2008-04-081-1/+1
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* [svn-r14815] added commentsPedro Vicente Nunes2008-04-081-1/+1
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* [svn-r14814] added commnentsPedro Vicente Nunes2008-04-081-1/+1
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* [svn-r14813] modified the test suite for H5Dget_chunk_info so that it writes ↵Pedro Vicente Nunes2008-04-081-12/+75
| | | | | | a 4X4 dataset by iterating by 2X2 chunks tested: windows
* [svn-r14812] Description:Albert Cheng2008-04-082-5/+5
| | | | | | | | | | | | | The development branch was changed to default enable-production for the v1.8 release but had not switched back to default development mode. Solution: Changed it back to --disable-production (aka development) as the default. Also ran bin/reconfigure to update configure. Tested: Smirom only. No h5committest since the change is trivial and if it works at smirom, it should work everywhere else.
* [svn-r14809] Add fix for H5Lcreate_external() to the list of bug fixes.Vailin Choi2008-04-081-0/+4
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* [svn-r14807] add an entry to a new file /test/chunk_info.cPedro Vicente Nunes2008-04-071-0/+1
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* [svn-r14806] add a test for the H5Dget_chunk_info functionPedro Vicente Nunes2008-04-071-0/+90
| | | | | | at the moment, the test is just a skeleton for future add ins tested: windows
* [svn-r14804] mention to bug fixedPedro Vicente Nunes2008-04-071-1/+3
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* [svn-r14799] Snapshot version 1.9 release 1HDF Tester2008-04-067-18/+41
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* [svn-r14794] Use putenv() instead of setenv() in test/links.c Vailin Choi2008-04-043-8/+16
| | | | (solaris did not support setenv() and unsetenv())
* [svn-r14792] bug fix: #1106 h5dump -b will dump ASCII values for datasets ↵Pedro Vicente Nunes2008-04-034-32/+9
| | | | | | after the first one. One variable that controls the binary output was incorrectly reset to zero after a binary output was done a first time. The effect was that on cases of several datasets, the ones after the first were not binary written. Eliminated the resetting of that variable and tested a file with several datasets. Modified the test file so that it is easier to test with the tool binread, that reads the binary output of h5dump. tested: windows, linux
* [svn-r14789] Add handling for external link:Vailin Choi2008-04-0211-43/+1268
| | | | | | | 1. src/H5F.c, src/H5system.c: formulate path for mainfile 2. src/H5Lexternal.c: add search for target file 3. configure.in: add H5_HAVE_WINDOW_PATH 4. test/links.c: add tests for external link
* [svn-r14782] Make correction from "H5Pclose(aid)" to "H5Aclose(aid)"Peter Cao2008-03-271-1/+1
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* [svn-r14768] Purpose: Remove spurious szip link directory in h5repack debug ↵Scott Wegner2008-03-242-3/+3
| | | | | | | | | | project Description: As pointed out by a user, we added an un-needed link directory for szip which is machine-dependent and, in his case, problematic. We can safely remove this reference because we already include the szip link directory elsewhere. Tested: None, simply removed
* [svn-r14759] Snapshot version 1.9 release 0HDF Tester2008-03-207-18/+18
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* [svn-r14738] Description:Quincey Koziol2008-03-138-12/+156
| | | | | | | | | | Bring r14737 back from the 1.8 branch: Fix bug which would incorrectly encode the member offsets for compound datatypes whose size was between 256 & 511 bytes, when the "use the latest format" feature was enabled. Tested on: Mac OS X/32 10.5.2 (amazon) w/debug FreeBSD/32 6.2 (duty) w/production
* [svn-r14735] make 1.8 and 1.6 code equal or similarPedro Vicente Nunes2008-03-131-19/+22
| | | | | formatted code tested: windows, linux
* [svn-r14733] make 1.8 and 1.6 code equal or similarPedro Vicente Nunes2008-03-131-134/+134
| | | | | | formatted code bug fix: the 1.6 branch did not have a test for the existence of long double type on print_type (print name of datatype) tested: windows, linux
* [svn-r14730] make 1.8 and 1.6 code equal or similarPedro Vicente Nunes2008-03-121-678/+691
| | | | Tested: windows, linux
* [svn-r14728] make 1.8 and 1.6 code look equal or similarPedro Vicente Nunes2008-03-121-92/+125
| | | | Tested: windows, linux
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