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* Redo remove selection I/O test from testphdf5 in CMake #2860. (#2874)Larry Knox2023-05-021-1/+0
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* Add bin directory to make distclean (#2872)Dana Robinson2023-05-021-1/+1
| | | This allows h5cc to be cleaned up
* Harden H5O cache deserialize calls (#2856)Dana Robinson2023-05-011-295/+237
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* Add Fortran Selection IO APIs (#2864)Scot Breitenfeld2023-05-0111-52/+413
| | | new selection IO fortran APIs with tests
* Remove duplicate variable for configuration use (#2870)Allen Byrne2023-05-011-11/+8
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* Correct usage of CMAKE_BUILD_TYPE (#2863)Allen Byrne2023-05-013-15/+15
| | | Fixes a problem when using multi-config builds with the CMake GUI
* Skip page buffer test for "no selection I/O cause" when using split or multi ↵Neil Fortner2023-05-011-0/+11
| | | | driver (#2866)
* Remove "the the" from comments and docs (#2865)Dana Robinson2023-05-0119-35/+35
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* Use powershell shell to copy files (#2858)Allen Byrne2023-04-301-5/+5
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* Fix memory leaks in H5Dwrite w/ selection I/O (#2859)Dana Robinson2023-04-301-0/+7
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* Remove selection I/O test from testphdf5 in CMake (#2860)Dana Robinson2023-04-301-1/+0
| | | t_select_io_dset is a stand-alone program, not a part of testphdf5.
* Fix TRACE macros in selection I/O plist calls (#2857)Dana Robinson2023-04-301-2/+2
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* Add DT workflow for creating daily binaries (#2843)Allen Byrne2023-04-294-1/+360
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* chore(configure.ac): fix output message for enabling tools (#2684) (#2854)H. Joe Lee2023-04-291-1/+1
| | | Close #2684.
* Don't use strnlen when len is not known (#2855)Dana Robinson2023-04-291-15/+41
| | | | | | | | | | The datatype object header message decode function was updated to do bounds checking on the decode buffer. This buffer may arrive with no buffer size via H5Tdecode(), in which case the buffer size will have been set to SIZE_MAX by the library. This fix changes the string length calls to strlen when we don't know the buffer size (and avoids a potential compiler bug with icc 17).
* Converted H5D asserts to normal error checking (#2842)Dana Robinson2023-04-292-57/+45
| | | | These cases can trip when processing malformed files and it's better to invoke normal HDF5 error handling than crash a process.
* Implement selection I/O with type conversion (#2823)Neil Fortner2023-04-2846-378/+9466
| | | | | Initial implementation of selection I/O with type conversion. Allows Parallel collective I/O with type conversion, as long as selection I/O is enabled.
* Update H5Dget_space_status bug note to reference 1.14.0 (#2839)jhendersonHDF2023-04-281-1/+1
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* Remove unused variable warning (#2828)H. Joe Lee2023-04-281-1/+1
| | | Polaris FORTRAN compiler reported the unused variable warning.
* Correct compression install files (#2838)Allen Byrne2023-04-282-8/+22
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* h5fuse.sh fix for summit. (#2841)Scot Breitenfeld2023-04-282-11/+7
| | | * updated directory locations
* Subfiling VFD - check if MPI is finalized during VFD termination (#2683)jhendersonHDF2023-04-273-28/+87
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* Harden superblock cache deserialization (#2809)Dana Robinson2023-04-271-214/+146
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* Fix v1 object header gap bug in H5Ocopy (#2785)jhendersonHDF2023-04-263-2/+83
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* Add support for CMakePresets and fix example download (#2817)Allen Byrne2023-04-267-12/+880
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* H5fuse.sh optimization updates (#2806)Scot Breitenfeld2023-04-261-57/+165
| | | | | | Changed to processing subfiles at the subfile level. Simplified parameter arguments. Enabled running it in parallel. Added option to specify subfiling configuration location.
* Harden H5G cache deserialization (#2810)Dana Robinson2023-04-261-68/+45
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* Allow H5P_DEFAULT in H5Pget_vol_cap_flags and H5Pget_vol_id (#2807)jhendersonHDF2023-04-253-1/+37
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* Sanitize H5HG cache deserialization code (#2808)Dana Robinson2023-04-252-153/+173
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* Harden the v1 B-tree and local heap cache clients (#2803)Dana Robinson2023-04-254-96/+90
| | | | * Hardens v1 B-tree deserialize function * Harden the H5HL deserialize functionality
* H5Odtype.c decode cleanup (#2797)Dana Robinson2023-04-252-169/+321
| | | | * Adds bounds checking to H5Odtype.c * Minor tidy of dtypes test
* Sanitize object header message decode functions (#2795)Dana Robinson2023-04-2514-409/+407
| | | | | * Add buffer bounds checks * Convert asserts to real error handling to better detect broken files * General cleanup
* Fix hdfeos5 workflow concurrency conflicts (#2804)jhendersonHDF2023-04-241-1/+1
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* Add release note for ROS3 VFD anonymous credential fix (#2801)jhendersonHDF2023-04-241-0/+13
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* Fix ROS3 VFD anonymous credential usage with h5dump and h5ls (#2798)jhendersonHDF2023-04-242-4/+27
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* Correct CMake option defaults - deprecate szip for libaec (#2778)Allen Byrne2023-04-2311-150/+143
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* docs: remove signature requirement from CONTRIBUTING.md (#2784)H. Joe Lee2023-04-231-5/+0
| | | Per 2023-04-14 engineering team meeting decision
* Add bug note to H5Dget_space_status documentation (#2788)jhendersonHDF2023-04-231-0/+14
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* Change Powershell to PowerShell in docs (#2794)H. Joe Lee2023-04-231-1/+1
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* Added Fortran Async APIs (#2715)Scot Breitenfeld2023-04-2141-2667/+6152
| | | H5A, H5D, H5ES, H5G, H5F, H5L and H5O async APIs were added.
* Sanitize the attribute object header msg code (#2749)Dana Robinson2023-04-192-41/+80
| | | | | Adds: * Bounds checks on buffer access * Better memory cleanup
* Sanitize the H5Oname decode function (#2757)Dana Robinson2023-04-191-20/+14
| | | | * Add bounds checking * Add memory cleanup
* Sanitize the ohdr modification time decode fxns (#2762)Dana Robinson2023-04-181-36/+38
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* Add new version of COPYING_LBNL_HDF5. (#2773)Larry Knox2023-04-181-48/+60
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* Clean up H5Oefl decode function (#2755)Dana Robinson2023-04-181-27/+28
| | | | * Use the H5_IS_BUFFER_OVERFLOW macro * Attempt to close local heap on errors if left open
* Add no subsets option to h5diff like h5dump #2688 (#2756)Allen Byrne2023-04-1816-268/+203
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* Jira issue OESS-337: Create test for H5VLconnector_info_to_str (#2334)raylu-hdf2023-04-181-6/+152
| | | * Jira issue OESS-337: Adding a test case for H5VLconnector_info_to_str, H5VLconnector_str_to_info, and H5VLconnector_free_info. The test may need to change after the possible changes of the parameters of the API functions.
* Removes programmer/date lines from src headers (#2747)Dana Robinson2023-04-1877-542/+203
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* Update concurrency group for main CI workflow (#2768)jhendersonHDF2023-04-171-1/+1
| | | Updates main CI workflow concurrency group so that the group should be a unique string formed as "workflow file-commit" or "workflow file-PR number". This should only cancel actions for a PR if the same PR is committed to while the actions are running.
* Check for invalid AAPL in H5Aopen (#2712)jhendersonHDF2023-04-171-5/+9
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