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* [svn-r11404] Purpose: MaintenanceElena Pourmal2005-09-132-1/+2
| | | | | | | | | | Description: Brought back changes from SX-6. Solution: Program will not compile. Fixed. Platforms tested: SX-6, heping and mir with new g95 Misc. update:
* [svn-r11403] Purpose: MaintenanceElena Pourmal2005-09-132-2/+3
| | | | | | | | | | Description: Brought back changes from SX-6. Solution: Tests will not compile. Fixed. Platforms tested: SX-6, heping and mir with new g95 Misc. update:
* [svn-r11402] Purpose: MaintenanceElena Pourmal2005-09-133-4/+4
| | | | | | | | | | | | Description: Compiler complained about const type * variables that were used in the functions that require "non const" parameters. Compilation failed. Solution: Use casting to avoid compilation errors. Platforms tested: SX-6, heping and mir with new g95 Misc. update:
* [svn-r11401] Purpose: MaintenanceElena Pourmal2005-09-131-1/+5
| | | | | | | | | | Description: brought back changes from SX-6 Solution: Platforms tested: SX-6, heping and mir with new g95 Misc. update:
* [svn-r11400] Purpose: MaintenanceElena Pourmal2005-09-131-2/+5
| | | | | | | | | | | Description: Added -K c99 flag to sxc++ flags to ienforce C99 standard; added cache values for getrusage and gethostname Solution: Platforms tested: SX-6 Misc. update:
* [svn-r11397] Purpose:Leon Arber2005-09-131-1/+0
| | | | | | | | | | | | | | | | Bug fix Description: Forgot to remove a debug statement before committing. Solution: The script printined out what it thought CC_BASENAME was for debugging. Removed this print statement. Platforms tested: minor change, mcr Misc. update:
* [svn-r11396] Purpose:Albert Cheng2005-09-121-1/+1
| | | | | | | | | | | | | | | | Code cleanup. Description: g++ on sleipnir complained and exited failed because the malloc statement in ALIGNMENT was not properly casted. Solution: added the proper (char * ) casting. Platforms tested: Passed heping using gcc. Sleipnir g++ passed too but that was also because the default development mode is used.
* [svn-r11395] Purpose: Bug fixRaymond Lu2005-09-122-238/+461
| | | | | | | | | | | | | | | | | | Description: Quincey added the condition branch (else if (*((ST*)S) != (ST)((DT)(*((ST*)S))))) in the definition of the macro H5T_CONV_Fx_CORE. It handles a special situation when the source is "float" and assigned the value of "INT_MAX". Compilers do roundup making this value "INT_MAX+1". This branch is to check that situation and return exception for some compilers, mainly GCC. The branch if (*((ST*)S) > (DT)(D_MAX) || (S_PREC < D_PREC && *((ST*)S) == (DT)(D_MAX))) is for some compilers like Sun, HP, IBM, and SGI where under the same situation the "int" doesn't overflow. A test was added to dt_arith.c to check 2 conversions, from float to int where the float is INT_MAX, and from double to signed char where the double is SCHAR_MAX. Platforms tested: h5committest and fuss.
* [svn-r11394] Purpose:Leon Arber2005-09-121-93/+2
| | | | | | | | | | | | | | | Bug fix Description: Same bug as was just checked in for v16. Do the complicated derived datatype check for compilers named mpiicc in addition to mpicc. Solution: Platforms tested: Misc. update:
* [svn-r11392] Purpose:Quincey Koziol2005-09-121-1/+1
| | | | | | | | | | | Bug fix Description: Recent group code changes tweaked the size of the free space in the file for this test. Update to the latest correct value. Platforms tested: h5committested
* [svn-r11389] Purpose:MuQun Yang2005-09-121-7/+2
| | | | | | | | | | | Modify the comments for collective chunk IO support Description: Solution: Platforms tested: Misc. update:
* [svn-r11388] Purpose:Pedro Vicente Nunes2005-09-122-9/+13
| | | | | | | | | | | | | | | bug fix Description: during the generation of some test files, H5Fclose was not called during the #ifdef detection of the scale ofsset filter, a wrong macro symbol was used Solution: Platforms tested: linux Misc. update:
* [svn-r11386] Purpose:Quincey Koziol2005-09-1218-416/+625
| | | | | | | | | | | | | | Code cleanup/reorganization Description: Merge back some more changes extracted from the "compact group" set. This bunch cleans up and prepares the H5G_* routines for eventual import of new features. Platforms tested: FreeBSD 4.11 (sleipnir) Linux 2.4 Mac OS X.4
* [svn-r11384] Purpose:Quincey Koziol2005-09-1230-295/+610
| | | | | | | | | | | | | | | | | | | | | Code cleanup Description: Merge back changes from "compact group" work that improve the infrastructure of the library and may impact others. In this round of merging, that includes: - Move datatype allocation into single internal routine, instead of duplicated code that was spread out in a dozen or so places. - Clean up guts of object header routines (H5O_*) to allow for some of the fancieroperations that need to be performed on groups, along with some general improvements. - Added a new error code - Some minor cleanups in other code.... Platforms tested: FreeBSD 4.11 (sleipnir) Linux 2.4 Mac OS X
* [svn-r11381] Purpose:Albert Cheng2005-09-091-1/+1
| | | | | | | | | | | | | | | | | | | bug fix. Description: In Janus (Tflops), the test would seg-fault in production (compiled with -O). If compiled with -O0, it would be okay. Track down the problem to the for loop index i & j being declared with type hsize_t which is usually unsigned long int. Guess the Tflop compiler has a bug in optimization that could not handle unsigned int as for loop index. Solution: Since it is no need for i & j to be hsize_t and it makes more sense to have them with type int. Changed them to int type. Platforms tested: Passed in tflops and colonelk here.
* [svn-r11374] Purpose: Maintenance/improvementElena Pourmal2005-09-081-0/+5
| | | | | | | | | | | Description: Added support for "big" REAL and DOUBLE PRECISION types. Solution: Platforms tested: heping with g95 (-r8, -d8) mir with ifc (-r16, -r8) Misc. update:
* [svn-r11373] Purpose: Maintenance/improvementElena Pourmal2005-09-081-1/+1
| | | | | | | | | | | Description: Fixeda typo in an error message Solution: Platforms tested: heping with g95 (-r8, -d8) mir with ifc (-r16, -r8) Misc. update:
* [svn-r11372] Purpose: Maintenance/improvementElena Pourmal2005-09-083-10/+151
| | | | | | | | | | | | | | | | Description: Added support for "big" REAL and DOUBLE PRECISION datatypes (i.e. sizes of Fortran real and double precision may be 8 and/or 16 bytes; usually specified by compilers flags like -r8, -r16, -d8, etc.) Solution: Added code to generate all necessary datatypes on a fly. Platforms tested: heping with g95 (-r8, -d8) mir with ifc (-r16, -r8) Note: multi file test failed when REAL is 128 bit. I will address this later. Misc. update:
* [svn-r11370] Purpose: Typo fixElena Pourmal2005-09-071-1/+1
| | | | | | | | | | Description: Fixed a typo introduced by my previous check in Solution: Platforms tested: heping Misc. update:
* [svn-r11369] Purpose: Improvement/maintenanceElena Pourmal2005-09-071-0/+43
| | | | | | | | | | | | Description: Added code to generate sizes of Fortran REAL and DOUBLE PRECISION types. This will "almost" eliminate H5f90i.h file that defines C stubs datatypes. Solution: Platforms tested: heping with g95 (-r8, -d8 and default settings) Misc. update:
* [svn-r11368] Purpose:Fang Guo2005-09-071-18/+25
| | | | | | | | | | | Maintenance on Windows Description: Add definition for int <-> float conversion exception Solution: Platforms tested: MSVS 6.0 on Windows XP Misc. update:
* [svn-r11366] Purpose:Albert Cheng2005-09-071-2/+2
| | | | | | | | | | | | | | upgrade. Description: A new feature md5 is added to the release script. Upgrade snapshot to include md5 in the snapshot release process. Platforms tested: No test since the change is pretty simple and it is hard to test without really doing a snapshot release. Misc. update:
* [svn-r11365] Purpose:Fang Guo2005-09-073-8/+14
| | | | | | | | | | | Add more assertion error check Description: Solution: Platforms tested: heping Misc. update:
* [svn-r11364] Purpose:Leon Arber2005-09-071-1/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bug fix Description: Incorrectly terminated the received string in getenv_all Solution: Tasks would incorrectly terminat the environment string they received from the root task in getenv_all. They did the equivalent of: env[strlen(str) + 1] = '\0'. This resulted in a single "garbage" character inserted at the end of the string. This wasn't noticed until now because it seems that on most platforms this garbage character was a 0 anyway. This has been corrected to; env[strlen(str)] = '\0'. Platforms tested: Red Storm (where the bug was discovered) heping (pp) Misc. update:
* [svn-r11363] Purpose:James Laird2005-09-071-1/+8
| | | | | | | | | | Updated release notes Description: Added md5 checksumming and configure flag checking to release notes. Platforms tested: Change only to release notes
* [svn-r11362] Purpose:James Laird2005-09-071-17/+31
| | | | | | | | | | | | | | | | | | | | Feature - md5 checksum Description: Added md5 checksumming to snapshot releases. When bin/release is run, it will by default create a .tar archive and a .md5 checksum of that archive in the destination directory. Solution: md5 is now a method in bin/release, along with the various ways to compress hdf5. The checksum is always of the .tar archive, even when other forms of compression are used (this is so that a given release always has only one checksum, for simplicity). Platforms tested: mir (change to bin/release only) Misc. update:
* [svn-r11361] Purpose:James Laird2005-09-072-2/+2
| | | | | | | | | | | | | | | | Bug fix Description: Cygwin was failing (seemingly only when I built in parallel) when it couldn't find or build H5detect. Fixed a dependency. Solution: H5init.c was depending on H5detect instead of H5detect$(EXEEXT). On Cygwin, applications end in .exe ! Platforms tested: mir, cygwin (finrod)
* [svn-r11360] Purpose: SX-6 portElena Pourmal2005-09-071-1/+1
| | | | | | | | | | Description: SX-6 doesn't need to use ranlib. Solution: Set RANLIB variable to ":" (suggested by James) Platforms tested: SX-6 Misc. update:
* [svn-r11359] Purpose: Bug fix/maintenance/new featureElena Pourmal2005-09-071-0/+2
| | | | | | | | | | | | | | | | | | | Description: Currently we are trying to match excatly Fortran and C types. Unfortunately, some systems (SX-6) provide compiler switches (-ew) that make ALL Fortran types to be at least of size 8. As a result, Fortran library cannot be compiled. Solution: Allow INTEGER(HID_T) type to be 8 bytes if necessary. The values of this type are originated in the C library and can be safely passed back and forth. Please note that we cannot do the same for INTEGER(SIZE_T) type. Fortunately there is a switch that allows size_t be 8 bytes for both C and Fortran compilers. Platforms tested: It is a minor change, therefore SX-6 only; daily tests will do the rest :-) Misc. update:
* [svn-r11357] Purpose: SX-6 portElena Pourmal2005-09-061-6/+24
| | | | | | | | | | Description: Brought back changes from SX-6. Solution: Platforms tested: SX-6 NEC America Misc. update:
* [svn-r11356] Purpose: Update document.Raymond Lu2005-09-061-0/+3
| | | | Misc. update: Information about H5Tis_hard().
* [svn-r11355] Purpose: A new API function and its test.Raymond Lu2005-09-064-0/+142
| | | | | | | | | Description: Put in a new API funciton, H5Tis_hard. It checks whether the conversion function from a native type to another native type is a compiler (hard) conversion. Also checked a test in test/dt_arith.c. Platforms tested: h5committest and fuss.
* [svn-r11353] Purpose:James Laird2005-09-062-4/+25
| | | | | | | | | | | | | | | | | | Bug fix Description: Configure should now throw an error when C++ or threadsafe is enabled and a parallel compiler is being used. Platforms tested: sleipnir and modi4 Tested --enable-cxx --enable-parallel --disable-cxx --enable-cxx --disable-parallel cases in particular. Misc. update:
* [svn-r11350] Purpose:Albert Cheng2005-09-062-4/+4
| | | | | | | | | | | | | | | | | | Bug fix. Description: The incompatibility of enable-parallel and enable-cxx was not correctly coded. It would complained even for the case of ./configure --enable-cxx --disable-parallel. Solution: Changed it to use "$enable_XYZ" = "yes". Fixed the same for the enable-threadsafe checking too. Platforms tested: tested in heping. Misc. update:
* [svn-r11349] Purpose:Albert Cheng2005-09-051-25/+40
| | | | | | | | | | | | | | | | | | | | | | | | | | | Bug fix. Description: Some tests showed the filesize was not as expected. But the error was intermittent. This was a racing condition as some processes finish extend_chunked_dataset() sooner than others and return to the main body which proceeds to call the next test which also uses the same test data file and alters it. That messes up the "slower" processes which then see unexpected filesize. Also, the routine create_chunked_dataset() which creates test data file actually was executed by all processes. That is wrong. Solution: Added a barrier at the end of extend_chunked_dataset to make sure all processes are done with the test data file before returning. Changed create_chunked_dataset such that only one process would create the test data file. The rest does nothing but just wait for it to finish. Platforms tested: Tested in TG-NCSA in which the errors were detected. Misc. update:
* [svn-r11346] Purpose:Quincey Koziol2005-09-031-413/+466
| | | | | | | | | | | | | | | | | Bug fix & code cleanup Description: Fix problem with detecting precision overflows in a more portable way. (I was depending on the compiler not removing some temporary variables, which was a bad bet... :-) Also, hoist the checking for the exception handling routine out of the inner conversion loop, which should speed up conversions which don't have an exception handling routine defined. Platforms tested: FreeBSD 4.11 (sleipnir) h5committest
* [svn-r11345] Purpose:Quincey Koziol2005-09-033-54/+290
| | | | | | | | | | | | | | | | Bug fix & code cleanup Description: Address most of datatype conversion exception handling bug that Ed Hartnett reported. (He's reported a different problem now, but we're closer at least). Also, condense exception handling #ifdef's into one location instead of spread out in so many places. Platforms tested: FreeBSD 4.11 (sleipnir) Too minor to require h5committest
* [svn-r11344] Purpose:Quincey Koziol2005-09-032-12/+0
| | | | | | | | | | | Bug fix Description: Allow threadsafe & C++ to be enabled together - its working fine on sleipnir. Platforms tested: FreeBSD 4.11 (sleipnir)
* [svn-r11341] James Laird2005-09-022-0/+7
| | | | | | | | | | | | | | Purpose: Bug fix Description: H5Tinit.c wasn't being cleaned properly. Solution: Clean H5Tinit.c. Platforms tested: sleipnir only (very minor change)
* [svn-r11340] Purpose:Albert Cheng2005-09-021-3/+1
| | | | | | | | Big data set test was default off and rarely tested. Changed it to default on so that it gets tested. Platforms tested: Heping PP and Copper pp.
* [svn-r11339] Purpose:Albert Cheng2005-09-021-59/+43
| | | | | | | | | | | | | | | Bug fix #281 Description: Committed a wrong copy in the previous checkin. Solution: Checked in the right one and did some code cleanup, rearrangment. Platforms tested: heping pp. Misc. update:
* [svn-r11338] Purpose:Quincey Koziol2005-09-021-1/+3
| | | | | | | | | | | | | Bug fix Description: Check in fix that John found for bug in H5FD_extend() code - adjust beginning as well as size of free block when "extending" another block of space in the file. Platforms tested: FreeBsd 4.11 (sleipnir) Too minor to require h5committest
* [svn-r11337] Purpose:Quincey Koziol2005-09-018-244/+243
| | | | | | | | | | | | Code cleanup Description: Changed some scale+offset filter symbols from H5_SO_... -> H5Z_SO_... to indicate that they are in the H5Z package. Platforms tested: FreeBSD 4.11 (sleipnir) Too minor to require h5committest
* [svn-r11336] Purpose:James Laird2005-09-012-4/+4
| | | | | | | | | | Bug fix Description: A typo made configure throw an error if only C++ was enabled. Fixed. Platforms tested: mir
* [svn-r11335] Purpose:James Laird2005-09-012-8/+16
| | | | | | | | | | | | | | | Bug fix Description: configure used 'uname -o' to detect Cygwin. This command is fine on Cygwin, but causes errors on some other platforms (sol). Fixed this. Solution: Used 'uname' with no -o option to identify Cygwin. Platforms tested: mir, cygwin (on finrod)
* [svn-r11334] Purpose:James Laird2005-09-012-0/+51
| | | | | | | | | | | | | | | | | | | | Feature: checking configure flags (bug #90) Description: Some configure flags don't work together. Configure now exits with a sensible error message if one of these combinations is specified. Solution: The following flags will throw errors: --enable-cxx and --enable-parallel --enable-cxx and --enable-threadsafe --enable-threadsafe and --enable-parallel --enable-fphdf5 and --enable-fortran Platforms tested: mir, modi4, heping Misc. update:
* [svn-r11333] Purpose: Change configure's default.Raymond Lu2005-09-012-4/+4
| | | | | | | | | Description: Changed configure's default disable-dconv-exception and disable-dconv-accuracy back to enable-dconv-exception and enable-dconv-accuracy. The test has been finished. Platforms tested: fuss - tested before.
* [svn-r11332] Purpose: Minor Change to Macro NamesRaymond Lu2005-09-013-146/+146
| | | | | | | | | Description: Changed the names of macros defined in H5Tpkg.h from H5T_CONV_INTERIM_XXX_XXX to H5T_CONV_INTERNAL_XXX_XXX to be more descriptive. Platforms tested: fuss - simple change
* [svn-r11331] Purpose:James Laird2005-09-012-6/+6
| | | | | | | | | | Bug fix Description: Replaced 8 spaces with tabs in c++/examples/Makefile.am. Platforms tested: mir, sleipnir
* [svn-r11330] Purpose:James Laird2005-08-318-87/+33
| | | | | | | | | | | | | | | | | Bug fix Description: Errors on sol may have been due to "make clean" being run both manually and by automake. Removed the manual run. Also cleaned c++/examples/ii_files directory created by some compilers (e.g., on modi4). Solution: This does mean that examples directories will not be cleaned by 'make clean'. Platforms tested: sol, mir, heping, modi4
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