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* Squash merge of file locking fixesDana Robinson2020-08-0339-309/+1458
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* Merge pull request #2723 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor ↵Dana Robinson2020-08-019-414/+331
|\ | | | | | | | | | | | | to develop * commit '08dca47475f41e93348cf0c2ea708e787c232014': Minor normalizations with hdf5_1_10
| * Minor normalizations with hdf5_1_10Dana Robinson2020-07-319-414/+331
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* | Merge pull request #2722 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2020-07-312-5/+8
|\ \ | |/ |/| | | | | * commit 'fc57490e02835ddfce644135e93e893f77b379d3': Mingw copy disabled
| * Mingw copy disabledAllen Byrne2020-07-312-5/+8
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* Merge pull request #2720 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor ↵Dana Robinson2020-07-3111-312/+220
|\ | | | | | | | | | | | | to develop * commit 'c8ba30d965f0342e5725a11cb562dfb22c8a8d24': Minor normalization with 1.10 branch
| * Merge branch 'develop' into develop_minorDana Robinson2020-07-3071-4714/+4091
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* | Merge pull request #2718 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2020-07-3010-134/+126
|\ \ | | | | | | | | | | | | * commit 'ff4a9d0ec2e85cf15f769006e92e756a79869ab8': Warnings reduction in tools
| * | Warnings reduction in toolsAllen Byrne2020-07-3010-134/+126
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* | Merge pull request #2716 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2020-07-299-27/+27
|\ \ | | | | | | | | | | | | | | | * commit '6a1cf090c6a2f970084c714a2f75a31d68a0a6a8': Correct reference file Correct h5diff filenames
| * | Correct reference fileAllen Byrne2020-07-291-2/+2
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| * | Correct h5diff filenamesAllen Byrne2020-07-299-29/+29
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* | Merge pull request #2711 in HDFFV/hdf5 from bmr-HDFFV-11120 to developBinh-Minh Ribler2020-07-292-1/+29
|\ \ | | | | | | | | | | | | | | | | | | | | | Fix HDFFV-11120 and HDFFV-11121 (CVE-2018-13870 and CVE-2018-13869) * commit '707e30c6be1954c0027374124207e46caae68cbc': Fixed typos in error messages. Fix HDFFV-11120 and HDFFV-11121 (CVE-2018-13870 and CVE-2018-13869)
| * | Fixed typos in error messages.Binh-Minh Ribler2020-07-281-3/+3
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| * | Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into ↵Binh-Minh Ribler2020-07-2223-236/+162
| |\ \ | | | | | | | | | | | | bmr-HDFFV-11120
| * | | Fix HDFFV-11120 and HDFFV-11121 (CVE-2018-13870 and CVE-2018-13869)Binh-Minh Ribler2020-07-222-1/+29
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: When a buffer overflow occurred because a name length was corrupted and became very large, h5dump produced a segfault on one file and a memcpy parameter overlap on another file. This commit added checks that detect a read pass the end of the buffer to prevent these error conditions. Platforms tested: Linux/64 (jelly) SunOS 5.11 (emu)
* | | | Merge pull request #2714 in HDFFV/hdf5 from ↵Dana Robinson2020-07-284-5/+99
|\ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:h5s_set_extent_none to develop * commit 'e4603ff8a171e82de6373ba6eddcf59d5eeab5aa': Updated the Java tests to deal with H5Sset_extent_none changes Fixed additional typos in tselect.c comments. Fixes typo in tselect.c Updates H5Sset_extent_none() to set H5S_NULL
| * | | | Updated the Java tests to deal with H5Sset_extent_none changesDana Robinson2020-07-281-1/+1
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| * | | | Fixed additional typos in tselect.c comments.Dana Robinson2020-07-281-2/+2
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| * | | | Fixes typo in tselect.cDana Robinson2020-07-281-1/+1
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| * | | | Updates H5Sset_extent_none() to set H5S_NULLDana Robinson2020-07-283-4/+98
| | |/ / | |/| | | | | | | | | | | | | | | | | | | | | | | | | | The API call used to set the internal H5S_NO_CLASS value which produced errors when such a dataspace was passed to many other API calls. Fixes HDFFV-11027
* | | | Merge pull request #2697 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2020-07-2864-4679/+3942
|\ \ \ \ | |/ / / |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '5857bb817019b8513f796c9564de3f1845f9a44a': Only one line needed to compare Revert err file revert error-stack enable Add release notes for tools add test file ext Correct file name in test Tools refactor
| * | | Only one line needed to compareAllen Byrne2020-07-271-0/+1
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| * | | Revert err fileAllen Byrne2020-07-271-8/+0
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| * | | revert error-stack enableAllen Byrne2020-07-201-1/+1
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| * | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2020-07-2023-236/+162
| |\ \ \ | |/ / / |/| | | | | | | | | | | * commit '74e09473c825610d203565e5ed9deb156256d6ea': Minor normalization with 1.10.
| * | | Add release notes for toolsAllen Byrne2020-07-201-2/+38
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| * | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2020-07-178-1/+200
| |\ \ \ | | |/ / | | | | | | | | | | | | | | | | * commit '9d3ea366d4bf3278e8260f4d5cdcc88cb4b61c56': Update MANIFEST. Add new test to Cmake. Fix for jira issue HDFFV-11080: (1) Patch up the file pointer when reading attribute of variable length datatype (2) Test to verify the fix when doing multiple threads
| * | | add test file extAllen Byrne2020-07-172-4/+4
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| * | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2020-07-174-31/+30
| |\ \ \ | | | | | | | | | | | | | | | | | | | | * commit 'e36047b9b9839d1fd0b4009b7066b8b50b95bc6d': Minor normalization with 1.10
| * \ \ \ Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2020-07-164-25/+336
| |\ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | * commit '58d37c2295044ad1a201d6671cdd67ae380b84f8': H5R: fix type conversion of references within vlen type
| * | | | | Correct file name in testAllen Byrne2020-07-161-1/+1
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| * | | | | Tools refactorAllen Byrne2020-07-1560-4667/+3901
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Move error_stack setup to tools library Add structure for h5dump properties Eliminate duplicated h5diff functions Use properties structure in place of argument lists.
| * | | | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2020-07-142-29/+8
| |\ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '806f5b5b2a280072f62f58c48e93acdc84f2b3ae': Removed POSIX #defines from configure on Solaris. Fallback to older time functions in new timer code.
| * \ \ \ \ \ Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2020-07-117-5/+94
| |\ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'b480d0a38b1e265c55c74262bf384d255a33e07b': Remove path to szip header file from AM_CPPFLAGS when configure check of libsz fails. Fix for HDFFV-10830. HDFFV-11116 Add option for install location of Fortran MOD files
| * \ \ \ \ \ \ Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2020-07-0921-1074/+1055
| |\ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'f5da9b1befeb81aa9f4d97df3ec606f801807420': Minor changes from normalization with 1.10
| | | | | | | | * Minor normalization with 1.10 branchDana Robinson2020-07-2711-312/+220
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* | | | | | | | Merge pull request #2703 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor ↵Dana Robinson2020-07-2023-236/+162
|\ \ \ \ \ \ \ \ | |_|_|_|_|_|_|/ |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | to develop * commit '242459231b40a88741cbc85df4272914b5d8bed3': Minor normalization with 1.10.
| * | | | | | | Minor normalization with 1.10.Dana Robinson2020-07-2023-236/+162
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* | | | | | | | Merge pull request #2693 in HDFFV/hdf5 from ↵Vailin Choi2020-07-178-1/+200
|\ \ \ \ \ \ \ \ | |_|_|_|_|_|_|/ |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ~VCHOI/my_third_fork:bugfix/HDFFV-11080-heap-use-after-free-by-the-call to develop * commit '3023b34272cc6ada84aebfa7441a6a55afa3621c': Update MANIFEST. Add new test to Cmake. Fix for jira issue HDFFV-11080: (1) Patch up the file pointer when reading attribute of variable length datatype (2) Test to verify the fix when doing multiple threads
| * | | | | | | Update MANIFEST.vchoi2020-07-162-0/+2
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Add new test to Cmake.
| * | | | | | | Fix for jira issue HDFFV-11080:vchoi2020-07-146-1/+198
| | |_|_|/ / / | |/| | | | | | | | | | | | | | | | | | | | | | | | | | (1) Patch up the file pointer when reading attribute of variable length datatype (2) Test to verify the fix when doing multiple threads
* | | | | | | Merge pull request #2700 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor ↵Dana Robinson2020-07-174-31/+30
|\ \ \ \ \ \ \ | | |/ / / / / | |/| | | | / | |_|_|_|_|/ |/| | | | | | | | | | | | | | | | | to develop * commit '6388a6750ff1dc476b8631d26cd1742730df9fe8': Minor normalization with 1.10
| * | | | | Minor normalization with 1.10Dana Robinson2020-07-174-31/+30
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* | | | | Merge pull request #2694 in HDFFV/hdf5 from ~JSOUMAGNE/hdf5:fix_vlen_ref to ↵Jerome Soumagne2020-07-164-25/+336
|\ \ \ \ \ | |_|_|_|/ |/| | | | | | | | | | | | | | | | | | | | | | | | develop * commit 'aa9d2bd9bcce7a1a53c9d9cf519df5401041bb74': H5R: fix type conversion of references within vlen type
| * | | | H5R: fix type conversion of references within vlen typeJerome Soumagne2020-07-164-25/+336
|/ / / / | | | | | | | | | | | | Update trefer.c with vlen test case
* | | | Merge pull request #2692 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor ↵Dana Robinson2020-07-142-29/+8
|\ \ \ \ | |/ / / |/| | | | | | | | | | | | | | | | | | | | | | | to develop * commit 'b8013380792a3503003f0a2bd60d7541656b03c7': Removed POSIX #defines from configure on Solaris. Fallback to older time functions in new timer code.
| * | | Removed POSIX #defines from configure on Solaris.Dana Robinson2020-07-141-6/+0
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| * | | Fallback to older time functions in new timer code.Dana Robinson2020-07-141-23/+8
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* | | Merge pull request #2686 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to developLarry Knox2020-07-111-1/+4
|\ \ \ | | | | | | | | | | | | | | | | * commit '800f93f7c994f88dfa716746153ded4b1e690e3a': Remove path to szip header file from AM_CPPFLAGS when configure check of libsz fails. Fix for HDFFV-10830.
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