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* [svn-r26963] HDFFV-9298: make uninstall generated "test: argument expected" ↵Albert Cheng2015-04-298-4/+12
| | | | | | | | | lines The error is that $EXAMPLETOPDIR is used without setting a value first. Solution is to set them with the proper values. Tested: jam only to confirm the error no longer exists.
* [svn-r26961] Description:Quincey Koziol2015-04-291-48/+17
| | | | | | | | Clean up H5I code, to eliminate duplicated sections of code. Tested on: Mac OSX/64 10.10.3 (amazon) w/serial & parallel (Too minor to require h5committest)
* [svn-r26953] Remove src temporary debug build props.Allen Byrne2015-04-285-42/+38
| | | | Move TOOLS option up before usage.
* [svn-r26951] add cygwinAllen Byrne2015-04-281-5/+14
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* [svn-r26949] Correct linux separatorsAllen Byrne2015-04-281-11/+11
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* [svn-r26944] Match src folder versionAllen Byrne2015-04-281-3/+7
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* [svn-r26941] Correct ext lib packing listAllen Byrne2015-04-281-2/+6
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* [svn-r26936] Incorrect use of HSIZE_T_FORMAT macro, needed to be sub macro ↵Allen Byrne2015-04-271-3/+3
| | | | | | H5_PRINTF_LL_WIDTH. Tested: local linux
* [svn-r26929] Added support for shared lib and zlib.Albert Cheng2015-04-271-5/+17
| | | | Tested: linux (jam), Mac (osx1010dev)
* [svn-r26926] Fixed previous typo in the installation of DMG file.Albert Cheng2015-04-271-1/+1
| | | | Tested: osx1010dev
* [svn-r26925] Added method to install the Mac OSX DMG file by line commands.Albert Cheng2015-04-271-1/+36
| | | | | | Group all install method into a function call for easier maintenance. Tested: Linux (jam, platypus), Mac (osx1010dev)
* [svn-r26924] Remove old and invalid information:Albert Cheng2015-04-271-48/+2
| | | | | | Retired IBM SP system which was old. Removed --enable-parallel=mpich information. The option is invalid now (remove date unknown.)
* [svn-r26907] Check range and fix conversion issue of compound members in ↵Jerome Soumagne2015-04-231-9/+25
| | | | | | H5T_copy/H5T_set_loc Tested: local linux
* [svn-r26906] Correct typoAllen Byrne2015-04-231-1/+1
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* [svn-r26905] Add user scripts to CMake folderAllen Byrne2015-04-233-0/+446
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* [svn-r26900] Update CMake doc referencesAllen Byrne2015-04-233-79/+156
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* [svn-r26868] Remove accum_change assert in H5T for nowJerome Soumagne2015-04-211-2/+2
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* [svn-r26864] Change location of lib settings fileAllen Byrne2015-04-211-1/+1
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* [svn-r26857] Bugs:Albert Cheng2015-04-211-3/+5
| | | | | | | | | | The configure summary (libhdf5.settings) was missing from the configure output. Solution: Append the configure summary to the configure logfile if configure succeeds. Tested: hand ran cmakehdf5 in jam and inspected the logfile.
* [svn-r26852] Correct component matchingAllen Byrne2015-04-201-11/+9
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* [svn-r26848] Fix warnings in H5TJerome Soumagne2015-04-201-31/+115
| | | | Tested: local linux
* [svn-r26843] Description:Quincey Koziol2015-04-194-6/+30
| | | | | | | | Minor code & warning cleanups. Tested on: MacOSX/64 10.10.2 (amazon) w/serial & parallel Linux/32 2.6.18 (jam) w/serial & parallel
* [svn-r26842] Description:Quincey Koziol2015-04-1810-123/+131
| | | | | | | | | | Cache the dataset's rank & dimension sizes, instead of querying them frequently, to speed up various checks & algorithms. Also, a few minor cleanups. Tested on: MacOSX/64 10.10.2 (amazon) w/serial & parallel Linux/32 2.6.18 (jam) w/serial & parallel
* [svn-r26841] Description:Quincey Koziol2015-04-184-7/+5
| | | | | | | | Minor formatting cleanups and remove unused field from callback struct. Tested on: Mac OSX/64 10.10.2 (amazon) w/serial & parallel (Too minor to require h5committest)
* [svn-r26840] configureLarry Knox2015-04-178-78/+174
| | | | | | | | | | | | | | | | | | configure.ac hl/src/H5LTparse.c hl/src/H5LTparse.h Address HDFFV-9010: configure issue with gcc 4.9.2 "-l ". Change default to disable_shared on CYGWIN. release_docs/INSTALL_Cygwin.txt release_docs/RELEASE.txt Update for changed default and no CYGWIN szip binary. c++/src/cpp_doc_config bin/h5vers AddressHDFFV-9010: Add cpp_doc_config to h5vers Tested with h5committest, on CYGWIN.
* [svn-r26837] Description:Quincey Koziol2015-04-176-341/+490
| | | | | | | | | | Separate allocating chunk on disk from inserting the chunk record into the index. This allows a "SWMR-safe" insert/update of chunks (the chunk is always allocated -> written -> inserted/updated in the index). Tested on: Mac OSX/64 10.10.2 (amazon) w/parallel & serial Linux/32 2.6.18 (jam) w/serial & parallel
* [svn-r26823] Update instruction that changes in this releaes that " ↵Albert Cheng2015-04-161-5/+4
| | | | | | | --enable-parallel has to be used explicitly to build parallel HDF5 regardless of the compiler type being used. (MSC - 2015/02/19 HDFFV-9068)"
* [svn-r26815] Update cmake configuration checksAllen Byrne2015-04-153-75/+1
| | | | Tested: local linux
* [svn-r26812] Removed printf debugging statements.Scot Breitenfeld2015-04-151-2/+0
| | | | Tested: trival.
* [svn-r26803] Fixed a minor typo in H5R code comment.Dana Robinson2015-04-141-1/+1
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* [svn-r26786] In libhdf5.settings.in, changed the C++ shared library setting ↵Dana Robinson2015-04-131-1/+1
| | | | | | | | variable from H5_CXX_SHARED (which no longer exists) to enable_static. Tested on: jam (configure only - minor change)
* [svn-r26785] Snapshot version 1.9 release 216HDF Tester2015-04-1212-23/+23
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* [svn-r26782] Remove md5 from METHODS arguments for calling bin/release ↵Larry Knox2015-04-121-2/+2
| | | | script from snapshot script. md5 method was removed and md5 checksums are always produced for all compression methods.
* [svn-r26778] fix path to configAllen Byrne2015-04-101-2/+2
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* [svn-r26777] - Fix usage of the internal AC global dxplsMohamad Chaarawi2015-04-1018-250/+259
| | | | | | - allocate sieve buffer with calloc instead of malloc tested with h5committest
* [svn-r26776] Add missing quote char.Allen Byrne2015-04-101-1/+1
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* [svn-r26772] Fixed wrong fapl for H5Fopen when testing H5Iget_name with ↵Scot Breitenfeld2015-04-091-1/+1
| | | | | | anonymously created datatype. Tested: jam (using split virtual driver)
* [svn-r26771] - remove unused internal dxpl properties and property lists ↵Mohamad Chaarawi2015-04-082-111/+30
| | | | | | | | from the AC layer - fix warnings in H5AC.c tested with h5committest
* [svn-r26767] Added test to address HDFFV-3065:Scot Breitenfeld2015-04-081-2/+57
| | | | | | H5Iget_name on datatype that is not named returns no error Tested: h5committest
* [svn-r26757] Description:Quincey Koziol2015-04-077-79/+64
| | | | | | | | Minor typos & code cleanups Tested on: MacOSX/64 10.10.2 (amazon) w/serial & parallel (Too minor to require h5committest)
* [svn-r26751] Updated.Albert Cheng2015-04-071-1/+0
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* [svn-r26750] HDFFV-8667: h5repack crashes on enumerated 8-bit type nested in ↵Albert Cheng2015-04-078-25759/+14
| | | | | | | | | compound type. Added the testing to h5repack where it belongs. Undo the tests added to h5dump. Tested: h5committested plus tested in jam by hand.
* [svn-r26746] install_parallel updates.Mohamad Chaarawi2015-04-071-118/+1
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* [svn-r26737] Purpose: Fix daily test failureBinh-Minh Ribler2015-04-063-8/+14
| | | | | | | | | | | | | | Description: - In DataType::DataType(const PredType& pred_type), using DataType::copy will invoke DataType::close() unnecessarily, which will produce undefined behavior. Changed to call H5Tcopy directly, code reuse is not useful in this case. - Also, fixed CommonFG::childObjVersion to return expected value outside of an if/else block. Platforms tested: Linux/ppc64 (ostrich) Linux/64 (platypus) Linux/32 2.6 (jam)
* [svn-r26721] Disable failing testAllen Byrne2015-04-031-1/+1
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* [svn-r26719] Add HL to default componentsAllen Byrne2015-04-031-1/+1
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* [svn-r26712] Bug fix: cmakehdf5 broken because zlib is no longer configure ↵Albert Cheng2015-04-021-0/+11
| | | | | | | | | | | | | | in by default. That broke the testings as some testfiles have zlib compressed datasets. Added options control to enable the linking of zlib external libarary by default and turn off the szip library linking as szip library may not be avaiable. This matches the established settings. Tested: run cmakehdf5 by hand in jam and platypus. Also tested in wren but it failed in the testing stage. Also tried "cmakehdf5 --script" in jam. It failed.
* [svn-r26711] Recommitting revisions 26669 and 26670, removing VPATH and ↵Larry Knox2015-04-0247-204/+6
| | | | | | | | redundant /usr/include and lib in fcompile and link flags checks, now that I have run reconfigure. Also changed paths to h5cc, etc. in scripts to run installed examples from relative paths to absolute paths. Tested with h5committest.
* [svn-r26702] HDFFV-8667: h5repack crashes on enumerated 8-bit type nested in ↵Albert Cheng2015-04-011-3/+16
| | | | | | | | | | | | | compound type. Description: The test added failed in some machines because the data file contains infinity values that different machines print them differently as "inf", "INF", "Inf", ... Solution: Added a "ignorecase" option to TOOLTEST() to do caseless matching between generated output vs expected output. This solved most machines problem for now. Tested: h5committest, emu by hand for both development and production modes. But cmake built h5dump failed to read the data file. Using the same source to build h5dump by autotools produced a h5dump that can read the test data file. Don't know why cmake could not produce a correct binary.
* [svn-r26699] Generators are only built staticAllen Byrne2015-04-0110-21/+21
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