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* [svn-r24938] Description:Binh-Minh Ribler2014-04-014-51/+222
| | | | | | | | | | | | | | | | | | | - Overloaded Atribute::getName to take a char* for the attribute name: ssize_t Attribute::getName(char* attr_name, size_t buf_size) - Switched the arguments in this function: ssize_t getName(size_t buf_size, H5std_string& attr_name) so it became: ssize_t getName(H5std_string& attr_name, size_t buf_size) The second argument is default to 0, and can be skipped. - Removed this function: H5std_string getName(size_t buf_size); it'll collide with the first function when that function takes a NULL for the first argument, and uses default value for the second argument. - Added more tests Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r24937] Adds an H5free_memory() function to the library for use withDana Robinson2014-03-3122-84/+110
| | | | | | | | | | | | functions that return library-allocated memory. The test and tool code were modified to use this new function where it's appropriate. Fixes HDFFV-7710, HDFFV-8519, and HDFFV-8551 Tested on: 64-bit Windows 7 w/ VS2012 32-bit LE linux w/ parallel and fortran (jam) 32-bit LE linux w/ fortran and C++ (jam)
* [svn-r24936] Correct declaration nameAllen Byrne2014-03-311-1/+1
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* [svn-r24935] Correct line numbersAllen Byrne2014-03-311-73/+73
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* [svn-r24934] Update file as referenced in configureAllen Byrne2014-03-311-296/+154
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* [svn-r24933] Add file required by automakeAllen Byrne2014-03-312-0/+140
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* [svn-r24932] HDFFV-8290: Remove unnecessary $(srcdir) and use AM_CPPFLAGS ↵Allen Byrne2014-03-3164-2860/+18254
| | | | | | instead of INCLUDES. Update automake to 1.14.1 h5committest
* [svn-r24931] Add interface property to targetAllen Byrne2014-03-311-3/+9
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* [svn-r24929] Description:Binh-Minh Ribler2014-03-312-4/+7
| | | | | | | | | Added proper deallocation/allocation to test. Revised incorrect comments. Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r24926] Description:Binh-Minh Ribler2014-03-301-0/+1
| | | | Added c++/test/tdspl.cpp
* [svn-r24925] Purpose: Fix HDFFV-7907Binh-Minh Ribler2014-03-309-8/+296
| | | | | | | | | | | | | | | | | | | | | | Description: Added transform property list functions // Constructor creates a dataset transform property list. DSetMemXferPropList(const char* expression); // Sets data transform expression. void setDataTransform(const char* expression) const; void setDataTransform(const H5std_string& expression) const; // Gets data transform expression. ssize_t getDataTransform(char* exp, size_t buf_size=0) const; H5std_string getDataTransform() const; Added test file tdspl.cpp. Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r24924] Snapshot version 1.9 release 175HDF Tester2014-03-3013-26/+26
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* [svn-r24919] Add MINGW checkAllen Byrne2014-03-271-4/+4
| | | | Tested: MinGW on Windows 7
* [svn-r24918] Fix command caseAllen Byrne2014-03-271-1/+1
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* [svn-r24912] Purpose: Fix HDFFV-8642Binh-Minh Ribler2014-03-274-6/+118
| | | | | | | | | | Description: Added CompType::setSize(size_t size) to set size for compound data type as H5Tset_size had been changed. Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r24904] Revert includes moveAllen Byrne2014-03-261-2/+2
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* [svn-r24903] Correct mod install listsAllen Byrne2014-03-261-15/+14
| | | | Tested: local linux
* [svn-r24901] Description:Binh-Minh Ribler2014-03-261-2/+2
| | | | | | | | | Fixed mismatched function prototype/definition that caused daily test failure on emu/production/HDF5TestExpress=1. Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r24899] Add msmpi fortran libs to FindMPIAllen Byrne2014-03-253-6/+10
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* [svn-r24895] Add INTERFACE properties to libsAllen Byrne2014-03-255-8/+29
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* [svn-r24893] CMake now prohibits configuring thread-safety w/ Fortran and C++.Dana Robinson2014-03-251-5/+12
| | | | | | These changes only apply to non-Cygwin Windows since CMake does not allow configuring thread-safety on any other platform. Tested on 64-bit Windows 7.
* [svn-r24889] Fix fortran mod file handling and packingAllen Byrne2014-03-241-8/+8
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* [svn-r24888] Cleaned-up warning errors using --enable-fortran only and gcc 4.8.2Scot Breitenfeld2014-03-241-4/+6
| | | | tested: gcc (4.8.2, jam)
* [svn-r24887] Fix fortran mod file handling and packingAllen Byrne2014-03-241-4/+10
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* [svn-r24886] Fix fortran mod file handling and packingAllen Byrne2014-03-243-6/+60
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* [svn-r24876] Move includes command up before all programsAllen Byrne2014-03-241-2/+2
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* [svn-r24875] Description:Quincey Koziol2014-03-241-6/+2
| | | | | | | | Update with corresponding information that was changed in hl/src/H5Tanalyze.l in r24869. Tested on: Linux 2.6.32-431.5.1.el6.ppc64/64 (ostrich)
* [svn-r24869] Description:Quincey Koziol2014-03-2318-165/+148
| | | | | | | | | | | | | | | | | | | | | | | | | Clean up more compiler warnings, plus merge a few Coverity bug fixes from the hdf5_1_8_coverity branch back to the trunk: r20877: Purpose: Fix coverity issue 1723 Description: Modified test_generate in hl/test_image to close file "f" before exit, even if an error occurs. r20879: Issue 63: change check of return of H5Tget_nmembers to <=0. No need to go futher if call fails as well as empty. r20881: Coverity #659 in Run 46: I changed the Line 442 where it tries to check whether FLAG_PRINTED is TRUE. But it had just been set to FALSE. I took out the condition check in the print statement. Tested on: Mac OSX/64 10.9.2 (amazon) w/C++, FORTRAN & Parallel (too minor to require h5committest)
* [svn-r24867] Description:Binh-Minh Ribler2014-03-225-10/+16
| | | | | | | | | | - Added a null terminator to the comment returned from the C call, in getComment methods - Some minor cleanup Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) Linux/64 2.6 (platypus)/PGI compilers
* [svn-r24866] Fixed compiler warnings using gnu 4.8.1 Scot Breitenfeld2014-03-228-58/+65
| | | | Tested: jam( intel, gnu, pgi)
* [svn-r24865] Description:Binh-Minh Ribler2014-03-2111-61/+156
| | | | | | | | | | | - Added another overload for char* argument: ssize_t getComment(const char* name, const size_t buf_size, char* comment) - Changed default value to 0 for the other two getComment methods - Added HDmemset to after every char string allocation to clear the buffer Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) Linux/64 2.6 (platypus)/PGI compilers
* [svn-r24864] Description:Quincey Koziol2014-03-2197-4694/+444
| | | | | | | | | | | | | | | | | | Remove all traces of MPI-POSIX VFD and GPFS detection/code. Remove remaining traces of stream VFD. Remove testpar/t_posix_compliant test (it's not actually verifying anything). Clean up H5D__mpio_opt_possible() further. Moved environment variable that disables MPI collective operations into MPI-IO VFD (instead of it being in src/H5S.c). A few other small code cleanups. Tested on: Mac OSX/64 10.9.2 (amazon) w/parallel & serial
* [svn-r24859] Remove unnecessary use of $(srcdir).before_removing_mpiposix_vfdAllen Byrne2014-03-214-30/+11
| | | | Tested: local linux, h5committest
* [svn-r24857] --enable-threadsafe no longer requires --with-pthreads if ↵Dana Robinson2014-03-212-218/+200
| | | | | | | | | | | | | | | | Pthreads can be found in the standard include and library paths. Tested on: 32-bit LE linux (jam) SunOS 5.11 (emu) 64-bit Darwin 12.5 (kite) 64-bit FreeBSD 8.2 (freedom) Testing focused on making sure that Pthreads could be found on different platforms and investigating the interaction of Fortran/C++/thread-safe options.
* [svn-r24856] added missing common statementScot Breitenfeld2014-03-211-0/+1
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* [svn-r24855] added missing dllexportScot Breitenfeld2014-03-211-0/+1
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* [svn-r24851] example causes modal permission dialog to popup on windows. ↵Allen Byrne2014-03-202-5/+5
| | | | build but do not execute.
* [svn-r24850] example causes modal permission dialog to popup on windows. Do ↵Allen Byrne2014-03-201-2/+3
| | | | not build.
* [svn-r24849] Update to synch with latest cmakeAllen Byrne2014-03-201-1/+20
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* [svn-r24846] Bug fix for HDFFV-8689 : Mix-match of type in ↵Scot Breitenfeld2014-03-204-44/+57
| | | | | | H5D_CHUNK_CACHE_NBYTES_DEFAULT, Review HDF5-184 Tested with -i8 flag with intel compilers and --enable-production
* [svn-r24830] Purpose: HDFFV-8623Binh-Minh Ribler2014-03-184-26/+26
| | | | | | | | | | | | Description: Applied patch from user Jason Newton. JIRA issue HDFFV-8623, patch 9, improve c++ compatibility with exceptions. All additions of "throw()" are included. Exception::what() is not added because it is not necessary. It was suggested for the name, which follows stdlib. Platforms tested: Linux/ppc64 (ostrich) Linux/32 2.6 (jam) Linux/64 2.6 (koala)/PGI compilers
* [svn-r24826] HDFFV-8700 -Allen Byrne2014-03-183-8/+10
| | | | | | | | KitWare recommendations: Change CMake commands to lower case. Bump up CMake minimum versions. Split test file into separate file for h5repack test. Tested: local linux
* [svn-r24824] HDFFV-8700 -Allen Byrne2014-03-1828-148/+246
| | | | | | | | KitWare recommendations: Change CMake commands to lower case. Bump up CMake minimum versions. Split test file into separate file for h5repack test. Tested: local linux
* [svn-r24822] Update GYGWIN versionAllen Byrne2014-03-181-1/+1
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* [svn-r24816] HDFFV-8695:Allen Byrne2014-03-173-26/+38
| | | | | Add notes about defining -DCMAKE_BUILD_TYPE:STRING=Release
* [svn-r24804] Description:Quincey Koziol2014-03-168-261/+229
| | | | | | | | | | | | | | | | | | | | | | | | Brought changes from Coverity branch back to trunk, and cleaned up misc. other warnings & formatting issues: r20833: Fixed Coverity 667 and 668 with real integer overflow tests this time. r20834: Use HDstrncpy and HDstrncat. --gh r20835: Change to use strncpy - use base_len + 1 for line 156, use HDstrlen(path) + 1 for line 159 r20836: Fixed coverity 585 by casting output of fgetc() to a char. r20837: Changed sprintf calls to snprintf with size 1 less than the allocated buffer to address coverity issue #967. Tested on: Mac OSX/64 10.9.2 (amazon) w/C++, FORTRAN & parallel (too minor to require h5committest)
* [svn-r24803] Description:Quincey Koziol2014-03-1622-240/+103
| | | | | | | | | | | | Rename GCC_DIAG_OFF/ON macros to H5_GCC_DIAG_OFF/ON and move from src/H5private.h to src/H5public.h. Wrap typedef of hsize_t and hssize_t in DIAG_OFF(long-long) macros. Clean up a bunch of "macro '-' is unused" warnings. Tested on: Mac OSX/64 10.9.2 (amazon) w/gcc 4.8.2, C++, FORTRAN, parallel (too minor to require h5committest)
* [svn-r24789] Bump up the minimum cmake versionAllen Byrne2014-03-1341-44/+44
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* [svn-r24783] fixed typoScot Breitenfeld2014-03-121-1/+1
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* [svn-r24782] HDFFV-8700 -Allen Byrne2014-03-1144-513/+517
| | | | KitWare recommendations: Change CMake commands to lower case.
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