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* Fortran wrappers for dataset obj header minimization API calls.Dana Robinson2019-01-086-3/+240
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* Merge pull request #1439 in HDFFV/hdf5 from rank0_bcast to developScot Breitenfeld2019-01-0714-124/+869
|\ | | | | | | | | | | | | | | | | | | | | * commit 'ab5fe769ab711f736238abc89ef215a6ecff5f7e': HDFFV-10625 -- Implemented a process-0 read and then broadcast for collective read of full (HS_ALL), contiguous, atomic datasets by all the processes in the file communicator. indent change changed logic statement in if Added chunking test, fixed issue with CX set Correct another git merge failure. Correct misplaced line from git merge. Updated and refined version of Scot's "rank 0 bcast" changes.
| * Merge branch 'rank0_bcast' of ssh://bitbucket.hdfgroup.org:7999/hdffv/hdf5 ↵M. Scot Breitenfeld2019-01-070-0/+0
| |\ | | | | | | | | | into rank0_bcast
| | * indent changeM. Scot Breitenfeld2019-01-071-5/+5
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| | * changed logic statement in ifM. Scot Breitenfeld2019-01-071-2/+1
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| | * Added chunking test, fixed issue with CX setM. Scot Breitenfeld2019-01-072-14/+162
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| | * Correct another git merge failure.Quincey Koziol2019-01-071-0/+1
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| | * Correct misplaced line from git merge.Quincey Koziol2019-01-071-1/+1
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| | * Updated and refined version of Scot's "rank 0 bcast" changes.Quincey Koziol2019-01-0714-124/+721
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| * HDFFV-10625 -- Implemented a process-0 read and then broadcast for ↵Quincey Koziol2019-01-0714-124/+869
|/ | | | collective read of full (HS_ALL), contiguous, atomic datasets by all the processes in the file communicator.
* Merge pull request #1444 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2019-01-071-37/+37
|\ | | | | | | | | * commit '591205127a167b914ef5557f30aa58b2dff96a85': HDFFV-10674 handle time as natural number
| * HDFFV-10674 handle time as natural numberAllen Byrne2019-01-071-37/+37
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* | Merge pull request #1445 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to ↵Vailin Choi2019-01-071-1/+1
|\ \ | | | | | | | | | | | | | | | | | | develop * commit '982852c603c03a06ca24f219127f49616c7d42cb': Fix for daily test failure: too many arguments to function 'H5Gopen1'
| * | Fix for daily test failure: too many arguments to function 'H5Gopen1'Vailin Choi2019-01-071-1/+1
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* | Merge pull request #1434 in HDFFV/hdf5 from ~JHENDERSON/hdf5:develop to developJordan Henderson2019-01-071-1/+1
|\ \ | |/ |/| | | | | * commit 'fe6bed2ad722578d0b701e29d22f591923d2fe9f': Fix TESTING_2 macro to align output with TESTING macro
| * Fix TESTING_2 macro to align output with TESTING macroJordan Henderson2019-01-071-1/+1
| | | | | | | | Add more indentation to TESTING_2 macro
* | Merge pull request #1440 in HDFFV/hdf5 from stackable_vol_fix_14 to developQuincey Koziol2019-01-0626-315/+711
|\ \ | | | | | | | | | | | | | | | | | | * commit 'f0656a57dc3baf02709e1ad5e496cf63cf820877': Remove incorrect comment. Updated error stacks for h5dump testing. Corrected comment in src/H5VLint.c, fixed pass-through info size in src/H5VLpassthru.c, switched to stashing VOL connector ID & info in API context (in src/H5CX.c, src/H5CXprivate.h, src/H5F.c, src/H5Fint.c, and src/H5Fefc.c), patched up all sorts of issues in the tests, to make them work with 'check-vfd' (and 'check-vol' again).
| * | Remove incorrect comment.Quincey Koziol2019-01-061-1/+0
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| * | Updated error stacks for h5dump testing.Quincey Koziol2019-01-067-24/+0
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| * | Corrected comment in src/H5VLint.c, fixed pass-through info size inQuincey Koziol2019-01-0619-291/+712
| | | | | | | | | | | | | | | | | | | | | src/H5VLpassthru.c, switched to stashing VOL connector ID & info in API context (in src/H5CX.c, src/H5CXprivate.h, src/H5F.c, src/H5Fint.c, and src/H5Fefc.c), patched up all sorts of issues in the tests, to make them work with 'check-vfd' (and 'check-vol' again).
* | | Merge pull request #1438 in HDFFV/hdf5 from mpio_vfd_neaten to developQuincey Koziol2019-01-061-475/+319
|\ \ \ | |/ / |/| | | | | | | | * commit '8a5d2c130a93a665933cda8db8554d006b7ca093': Clean up style issues, make function callbacks static, correct debug statements, etc. No functionality changes at all.
| * | Clean up style issues, make function callbacks static, correct debug statements,Quincey Koziol2019-01-051-475/+319
|/ / | | | | | | etc. No functionality changes at all.
* | Merge pull request #1433 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developLarry Knox2019-01-047-28/+90
|\ \ | |/ |/| | | | | | | | | * commit '564565b15ed38d78cb7b29b8c9d9b322d224ab42': HDFFV-10664 update reference file HDFFV-10664 update reference files HDFFV-10664 add missing function and check for restriction
| * HDFFV-10664 update reference fileAllen Byrne2019-01-041-3/+1
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| * HDFFV-10664 update reference filesAllen Byrne2019-01-043-23/+6
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| * HDFFV-10664 add missing function and check for restrictionAllen Byrne2019-01-044-4/+85
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* | Merge pull request #1425 in HDFFV/hdf5 from ~JHENDERSON/hdf5:develop to developJordan Henderson2019-01-042-0/+8
|\ \ | | | | | | | | | | | | * commit '659dd9bccf69f32bfdd01dc49410116ec5c1b0bb': Align H5Lcreate_ud behavior with documentation for NULL udata pointer
| * | Align H5Lcreate_ud behavior with documentation for NULL udata pointerJordan Henderson2019-01-032-0/+8
| | | | | | | | | | | | Add test for H5Lcreate_ud fix
* | | Merge pull request #1429 in HDFFV/hdf5 from ↵Larry Knox2019-01-042-0/+23
|\ \ \ | |_|/ |/| | | | | | | | | | | | | | | | | | | | HDFFV-10596-fortran-library-names-differ to develop * commit 'f4c9ec5d41aa53829617274d3286f1e9a45ae57e': Add RELEASE.txt entry for HDFFV-10596. Uninstall should remove the libhdf5_hl_fortran links. Add symlinks named libhdf5_hl_fortran* to libhdf5hl_fortran in Makefile.am to match cmake install and the name pattern for other hl lib files.
| * | Merge remote-tracking branch 'origin/develop' into ↵Larry Knox2019-01-044-269/+290
| |\ \ | |/ / |/| | | | | HDFFV-10596-fortran-library-names-differ
* | | Merge pull request #1430 in HDFFV/hdf5 from ↵jake.smith2019-01-041-24/+17
|\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | ~JAKE.SMITH/hdf5:dset_ohdr_minimize to develop * commit 'f7115c31363e80e850c0a228e63a5a035c48b74a': Remove "bad" statements at end of TEST_ERROR. Formerly arguments to FAIL_PUTS_ERROR Add semicolon at end of TEST_ERROR() invocation for consistency.
| * | | Remove "bad" statements at end of TEST_ERROR.Jacob Smith2019-01-041-24/+17
| | | | | | | | | | | | | | | | Formerly arguments to FAIL_PUTS_ERROR
| * | | Add semicolon at end of TEST_ERROR() invocation for consistency.Jacob Smith2019-01-041-1/+1
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* | | | Merge pull request #1428 in HDFFV/hdf5 from ↵Dana Robinson2019-01-043-245/+273
|\ \ \ \ | |/ / / |/| | | | | | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:openmpi_tweaks to develop * commit 'd59aa1d75cb6d0ae4f5964d017e275aa53394eb6': Cleaned up the parallel flush test and set t_pflush1 to always fail. Also set CMake to handle this.
| * | | Cleaned up the parallel flush test and set t_pflush1 to always fail.Dana Robinson2019-01-043-245/+273
| | | | | | | | | | | | | | | | Also set CMake to handle this.
| | * | Add RELEASE.txt entry for HDFFV-10596.Larry Knox2019-01-041-0/+9
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| | * | Uninstall should remove the libhdf5_hl_fortran links.Larry Knox2019-01-041-0/+1
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| | * | Add symlinks named libhdf5_hl_fortran* to libhdf5hl_fortran inLarry Knox2019-01-042-1/+14
| |/ / |/| | | | | | | | | | | | | | | | | Makefile.am to match cmake install and the name pattern for other hl lib files. Add missing ';' to test/dsets.c line 13075.
* | | Merge pull request #1427 in HDFFV/hdf5 from ↵jake.smith2019-01-042-37/+37
|\ \ \ | |/ / |/| | | | | | | | | | | | | | | | | ~JAKE.SMITH/hdf5:dset_ohdr_minimize to develop * commit '763db8178e673fdcae4a370fe2e6d345f905d5f1': Change FAIL_PUTS_ERROR to TEST_ERROR. Update calls: H5Dcreate to H5Dcreate2, H5Acreate to H5Acreate2.
| * | Change FAIL_PUTS_ERROR to TEST_ERROR.Jacob Smith2019-01-041-17/+17
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| * | Update calls: H5Dcreate to H5Dcreate2, H5Acreate to H5Acreate2.Jacob Smith2019-01-031-20/+20
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* | | Merge pull request #1426 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2019-01-036-5/+20
|\ \ \ | |/ / |/| | | | | | | | | | | | | | | | | * commit 'f4516d40feb7ea696e228253bc64a94f55296cbb': Fix comment Update toolchain comment Use c99 standard cmake variable Add PGI toolchain
| * | Fix commentAllen Byrne2019-01-031-1/+2
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| * | Update toolchain commentAllen Byrne2019-01-033-1/+4
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| * | Use c99 standard cmake variableAllen Byrne2019-01-021-3/+3
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| * | Add PGI toolchainAllen Byrne2019-01-022-0/+11
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* | Merge pull request #1408 in HDFFV/hdf5 from ↵Binh-Minh Ribler2019-01-032-5/+26
|\ \ | |/ |/| | | | | | | | | | | | | | | | | ~BMRIBLER/hdf5_bmr_fixbug:develop to develop Merged to catch daily test. * commit '40c55f24ecbdd322fba527d768689fbdbd268374': Removed a comment. Fixed documentation - typo only Fixed CVE division-by-zero issues Description: Fixed HDFFV-10577 and similar issues found in H5Dchunk.c. All the occurrences are in: H5D__create_chunk_map_single H5D__create_chunk_file_map_hyper H5D__chunk_allocate H5D__chunk_update_old_edge_chunks H5D__chunk_prune_by_extent H5D__chunk_copy_cb H5D__chunk_collective_fill Platforms tested: Linux/64 (jelly) Linux/64 (platypus) Darwin (osx1010test)
| * Removed a comment.Binh-Minh Ribler2019-01-031-1/+0
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| * Fixed documentation - typo onlyBinh-Minh Ribler2018-12-231-2/+1
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| * Merge branch 'develop' of ↵Binh-Minh Ribler2018-12-23319-12035/+21245
| |\ | | | | | | | | | https://bitbucket.hdfgroup.org/scm/~bmribler/hdf5_bmr_fixbug into develop
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