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~BYRN/hdf5_adb:bugfix/HDFFV-9961-add-git-to-ext-filter to develop
* commit 'd817b63020310b6f275a569529075551dd2b756e':
Fix copyright to point to cmake
Fix cyclic depends due to typo
Correct how include is used when located inside project
HDFFV-9961: Add GIT option to ext lib macros
Update copyright to latest from kitware
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* commit 'f9364c0080405bb36d704eb3f9505029d3da41f4':
removed the use of C_SIZEOF for non BIND(C) derived type
Fixed test to use storage_size instead of c_sizeof when available.
fixed missing closing bracket
Removed unused variables.
Fixed: Fortran_DOUBLE was being set to C_LONG_DOUBLE when C_LONG_DOUBLE is not available.
Removed duplicate FCFLAG
Removed duplicate FCFLAG.
Added number of integer KINDs found to the header files.
Added path to source include files when building buidiface.
Added rule to build buildiface program, without a rule, build would add repeated compile options when using the NAG compiler.
Misc. cleaning up of the program.
Added SEQUENCE to derived types for NAG:
misc. format code-cleanup
Removed the use of hard-coded integer KINDs.
Code clean-up.
HDFFV-9973 Fortran library fails to compile and fails tests with NAG compiler
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not available.
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repeated compile options when using the NAG compiler.
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* commit 'a7fb4ede8601e135433ef2d23bf4bbb466d9f58d':
Fix bug in "nooptype" decode in fix for TALOS-0177.
Change check for number of dimensions for old-style arrays in datatype decoding routine from an assertion to an if/HGOTO_ERROR check, since it is inappropriate to assert the contents of a file will be what we expect.
Fix issues in H5Znbit.c where the decompression algorithm would not check the compressed data for validity, potentially causing a buffer overflow.
Replace assertion in H5O_dtype_decode_helper for number of array dimensions with a check and error. The assertion was inappropriate because it is operating on data read from the file, which the library does not always have direct control of.
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Section 81 of the compiler manual, e.g. at
http://www.nag.co.uk/nagware/np/r61_doc/np61_manual.pdf
covers details about the compiler's internal representations, including
"
Fortran derived types are translated into C structs.
If BIND(C) or SEQUENCE is used, the order of the items within
the struct is the same as the order within the derived type definition.
Otherwise, the order of items is permuted to
put larger types at the front of the struct so as to improve alignment
and reduce storage; the C output code can be
inspected to determine the ordering used.
"
Removed INTENT(IN) to fix segfaults in C APIs for TYPE(C_PTR).
Tested: NAG (gnu)
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ssh://bitbucket.hdfgroup.org:7999/~brtnfld/hdf5_msb into develop
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Fixes issues with KIND = BYTE assumptions.
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All changes tested in Buildbot and locally.
* commit '8c49b6e05a7d40218b8129b29bd74bbd2b39758d':
HDFFV-9991: Remove uneeded file
Fix missing defines for standalone perf
Remove hanging property set
Revert clear objects for testfile removal
Merge test output file clearing into runTest.cmake
Move clear-objects inside runTest
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Checkpoint update
* commit '4a2669d51f8f839a63c1257c184318cd8c0ce1ae':
Correct typo: add ' '
Snapshot release: increment version.
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Fixes the v16 API failures in the evict-on-close test.
* commit 'dd47e42313fd4d76da95b7e48013bcd0d8879434':
Changed H5Dcreate to H5Dcreate2 in test/evict_on_close.c
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* commit '2299ff06c3dd9d5dee5320999a282f1526c27be7':
Correct variable name
Fix error reporting
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Merged evict-on-close feature from branch (via develop in cloned repo).
* commit 'cbc260e636e258cc55d9fb8fdafd3bff0877ac23': (21 commits)
- Removed BRANCH.txt and MANIFEST entry - Fixed a missing line in H5Dint.c
- Removed non-implemented code from H5Gint.c - Removed commented-out debug code from H5Dint.c - Added blank lines to eliminate delta in a fortran file.
Added full implementation of EoC cache test.
Added code to create the test file for all chunk index and layout types.
Fleshed out evict on close test that inspects cache.
Added the beginnings of a file generator to the test.
Fixed typo
Added "Purpose:" information to the API call comments for the new functions.
Cleaned up feature for dissemination to LLNL: - Removed support for datatypes. - Commented out support for groups - General change clean-up - Added a list of improvements to BRANCH.txt
Removed blank line in Fortran file (leftover from last commit)
Reverted H5T code since datatypes will not be supported at this time.
Fixed format_convert and fortran files (bad merge?).
Updated manifest. Was missing BRANCH.txt.
Added missing evict on close test file line to test/CMakeLists.txt.
[svn-r30110] Added missing evict_on_close.c file to test/.
[svn-r30108] Moved group flush and evict code to H5G_close from H5Gclose.
[svn-r30107] Moved dataset flush and evict code to H5D_close from H5Dclose.
[svn-r30106] Moved datatype close code to new internal function. H5Oclose() now supports evict-on-close for datatypes.
[svn-r30105] Datatypes and Groups now support evict-on-close.
[svn-r30084] First pass at the evict-on-close feature.
...
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- Fixed a missing line in H5Dint.c
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- Removed commented-out debug code from H5Dint.c
- Added blank lines to eliminate delta in a fortran file.
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~KOZIOL/hdf5:features/warning_cleanups to develop
* commit '5a7880183025f56421cf6f2274d9f1ac36f59641':
Clean up hardcoded constants and check return values better. (Comments from group code review)
Description: Cleanups from Dana's review.
Description: Further warning cleanups: from 667 warnings to 503.
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group code review)
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