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* Merge branch 'develop' of ↵Jordan Henderson2017-09-0129-951/+951
|\ | | | | | | ssh://bitbucket.hdfgroup.org:7999/~jhenderson/hdf5.git into develop
| * Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Jordan Henderson2017-09-0129-951/+951
| |\ | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'abcf30f232914c1ec9b8c5f2a3bb3a621af7bfe4': HDFFV-10284 Add VS2017 support Add commentary around calling H5Screate_simple with a single element Miscellaneous improvements (cont.) Description: Put back H5Location::getNumObjs and marked as deprecated in favor of Group::getNumObjs. Platforms tested: Linux/32 2.6 (jam) Darwin (osx1010test) Miscellaneous improvements Description: Moved H5Location::getNumObjs to Group::getNumObjs (i.e., H5Gget_info) Switched reinterpret_cast to static_cast in H5Object::iterateAttrs Miscellaneous cleanup Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test) HDFFV-10282 refactor out assert calls in tools Fix the t_bigio test so that it runs on 32bit machines
| | * Merge pull request #648 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-08-313-81/+92
| | |\ | | | | | | | | | | | | | | | | * commit '073f52424766cc4a8ac9d56966cb58c054ce3801': HDFFV-10284 Add VS2017 support
| | | * HDFFV-10284 Add VS2017 supportAllen Byrne2017-08-313-81/+92
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| | * Merge pull request #644 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-08-3118-808/+754
| | |\ | | | | | | | | | | | | | | | | * commit '61bdee1ff77a5db47ce8a88ce7e3c83e58123236': HDFFV-10282 refactor out assert calls in tools
| | | * Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2017-08-2920-516/+767
| | | |\ | | | |/ | | |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '289007567e6ab5e0893af787b1870f27f10644c7': Add commentary around calling H5Screate_simple with a single element Miscellaneous improvements (cont.) Description: Put back H5Location::getNumObjs and marked as deprecated in favor of Group::getNumObjs. Platforms tested: Linux/32 2.6 (jam) Darwin (osx1010test) Miscellaneous improvements Description: Moved H5Location::getNumObjs to Group::getNumObjs (i.e., H5Gget_info) Switched reinterpret_cast to static_cast in H5Object::iterateAttrs Miscellaneous cleanup Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test) Fix for daily test failure Fix for the compilation error from the PGI compiler. Modifications based on comments from pull request review (1) Remove unnecessary asserts (2) Add code to insert bad offset values to the test file in gen_bad_offset.c Fix for HDFFV-10216 segfault in H5G_node_cmp3 with corrupt h5 file Fix H5HL_offset_into() to return error when offset exceeds heap data block size. Also fix other places that call this routine to detect error return. Fix the t_bigio test so that it runs on 32bit machines
| | * | Merge pull request #642 in HDFFV/hdf5 from ~BMRIBLER/hdf5_bmr_cpp3:develop ↵Barbara Jones2017-08-297-52/+75
| | |\ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | to develop * commit '883a235d5ca81770228c5cb5f9d162afda0b411f': Miscellaneous improvements (cont.) Description: Put back H5Location::getNumObjs and marked as deprecated in favor of Group::getNumObjs. Platforms tested: Linux/32 2.6 (jam) Darwin (osx1010test) Miscellaneous improvements Description: Moved H5Location::getNumObjs to Group::getNumObjs (i.e., H5Gget_info) Switched reinterpret_cast to static_cast in H5Object::iterateAttrs Miscellaneous cleanup Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
| | | * | Miscellaneous improvements (cont.)Binh-Minh Ribler2017-08-252-0/+21
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: Put back H5Location::getNumObjs and marked as deprecated in favor of Group::getNumObjs. Platforms tested: Linux/32 2.6 (jam) Darwin (osx1010test)
| | | * | Merge branch 'develop' of ↵Binh-Minh Ribler2017-08-2427-514/+883
| | | |\ \ | | | | | | | | | | | | | | | | | | https://bitbucket.hdfgroup.org/scm/~bmribler/hdf5_bmr_cpp3 into develop
| | | * | | Miscellaneous improvementsBinh-Minh Ribler2017-08-247-69/+71
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: Moved H5Location::getNumObjs to Group::getNumObjs (i.e., H5Gget_info) Switched reinterpret_cast to static_cast in H5Object::iterateAttrs Miscellaneous cleanup Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
| | * | | | Merge pull request #635 in HDFFV/hdf5 from GreaterThan-2GB-MPIO to developRichard Warren2017-08-291-10/+30
| | |\ \ \ \ | | | |_|/ / | | |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Added some commentary on the fact that 32 bit compilers appear to require actual array arguments to call H5Screate_simple rather than a pointer to a single size_t element. * commit '22baab211d912f1012057b3a7ae217abd2a44a38': Add commentary around calling H5Screate_simple with a single element Fix the t_bigio test so that it runs on 32bit machines
| | | * | | Add commentary around calling H5Screate_simple with a single elementRichard Warren2017-08-291-7/+25
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| | | * | | Fix the t_bigio test so that it runs on 32bit machinesRichard Warren2017-08-151-5/+7
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| | | | | * HDFFV-10282 refactor out assert calls in toolsAllen Byrne2017-08-2318-808/+754
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* | | | | | Amend tests to explicitly use H5Dcreate2 and H5Dopen2Jordan Henderson2017-09-011-28/+28
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* | | | | Revert malloc's back to using hard-coded type for sizeofJordan Henderson2017-09-011-23/+23
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* | | | | Minor comment refactoringJordan Henderson2017-09-012-4/+5
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* | | | | Update documentationJordan Henderson2017-08-311-39/+158
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* | | | | Finish up Parallel Compression test scaling workJordan Henderson2017-08-292-93/+49
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* | | | | Partial update for scaling parallel filters testsJordan Henderson2017-08-282-366/+438
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* | | | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Jordan Henderson2017-08-2427-514/+883
|\ \ \ \ \ | |/ / / / | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '593e4038b3ab474a47e468bb3478d4ae3a6820e6': Fix for daily test failure Fix for the compilation error from the PGI compiler. Modifications based on comments from pull request review (1) Remove unnecessary asserts (2) Add code to insert bad offset values to the test file in gen_bad_offset.c HDFFV-10188 force non-native type description HDFFV-10188 emu insists on printing non-native description Fix for HDFFV-10216 segfault in H5G_node_cmp3 with corrupt h5 file Fix H5HL_offset_into() to return error when offset exceeds heap data block size. Also fix other places that call this routine to detect error return. HDFFV-10188 fix typo HDFFV-10188 add missing copy commands HDFFV-10188 Add tests and files HDFFV-10188 enable null space test HDFFV-10188 add release note HDFFV-10188 - Check for empty string first HDFFV-10188 error on NULL dataspace
| * | | | Merge pull request #641 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to ↵Vailin Choi2017-08-241-1/+1
| |\ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | develop * commit '268f01fd477e0474fa5727a47abef214a5e4293b': Fix for daily test failure Fix for the compilation error from the PGI compiler.
| | * \ \ \ Merge branch 'develop' of ↵Vailin Choi2017-08-2416-60/+221
| | |\ \ \ \ | | |/ / / / | |/| | | | | | | | | | https://bitbucket.hdfgroup.org/scm/~vchoi/my_hdf5_fork into develop
| * | | | | Merge pull request #637 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to ↵Vailin Choi2017-08-2312-454/+662
| |\ \ \ \ \ | | |_|_|_|/ | |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | develop * commit '1ef8577a4aaaa4120a819ff36747fdca99abdc26': Modifications based on comments from pull request review (1) Remove unnecessary asserts (2) Add code to insert bad offset values to the test file in gen_bad_offset.c Fix for HDFFV-10216 segfault in H5G_node_cmp3 with corrupt h5 file Fix H5HL_offset_into() to return error when offset exceeds heap data block size. Also fix other places that call this routine to detect error return.
| * | | | | Merge pull request #639 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-08-233-3/+3
| |\ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '678c3ae1535b9b3b9faa53bc48250f1635778dd7': HDFFV-10188 force non-native type description HDFFV-10188 emu insists on printing non-native description
| | * | | | | HDFFV-10188 force non-native type descriptionAllen Byrne2017-08-231-1/+1
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| | * | | | | HDFFV-10188 emu insists on printing non-native descriptionAllen Byrne2017-08-232-2/+2
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| * | | | | Merge pull request #636 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-08-2216-60/+221
| |\ \ \ \ \ | | |_|_|_|/ | |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '3dcb1887085678f08c02b64f1a04a77cd607cc4c': HDFFV-10188 fix typo HDFFV-10188 add missing copy commands HDFFV-10188 Add tests and files HDFFV-10188 enable null space test HDFFV-10188 add release note HDFFV-10188 - Check for empty string first HDFFV-10188 error on NULL dataspace
| | * | | | HDFFV-10188 fix typoAllen Byrne2017-08-211-1/+1
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| | * | | | HDFFV-10188 add missing copy commandsAllen Byrne2017-08-211-0/+2
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| | * | | | HDFFV-10188 Add tests and filesAllen Byrne2017-08-219-6/+109
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| | * | | | HDFFV-10188 enable null space testAllen Byrne2017-08-213-6/+45
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| | * | | | HDFFV-10188 add release noteAllen Byrne2017-08-211-0/+10
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| | * | | | HDFFV-10188 - Check for empty string firstAllen Byrne2017-08-161-1/+2
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| | * | | | HDFFV-10188 error on NULL dataspaceAllen Byrne2017-08-042-47/+53
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| | | * | Fix for daily test failureVailin Choi2017-08-241-1/+1
| | |/ / | | | | | | | | | | | | Fix for the compilation error from the PGI compiler.
| | * | Modifications based on comments from pull request reviewVailin Choi2017-08-237-51/+65
| | | | | | | | | | | | | | | | | | | | (1) Remove unnecessary asserts (2) Add code to insert bad offset values to the test file in gen_bad_offset.c
| | * | Fix for HDFFV-10216 segfault in H5G_node_cmp3 with corrupt h5 fileVailin Choi2017-08-2212-416/+610
| |/ / | | | | | | | | | | | | Fix H5HL_offset_into() to return error when offset exceeds heap data block size. Also fix other places that call this routine to detect error return.
* | | Modify t_dset.c in lieu of Parallel Compression changesJordan Henderson2017-08-151-5/+2
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* | | Updated H5C__flush_single_entry() in H5C.c to correctmainzer2017-08-151-8/+18
| | | | | | | | | | | | | | | | | | | | | duplicate metadata write bug observed in 1.10.1. Tested parallel/production on jelly parallel/debug & parallel/production on charis (in develop branch)
* | | Amend MANIFESTJordan Henderson2017-08-111-2/+2
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* | | Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into ↵Jordan Henderson2017-08-1192-1438/+5765
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| * | Merge pull request #630 in HDFFV/hdf5 from ~BRTNFLD/hdf5_msb:develop to developScot Breitenfeld2017-08-031-5/+5
| |\ \ | | | | | | | | | | | | | | | | | | | | * commit '2a1e499b0134ed319cd9d60a6521ba83b3a2cfa8': changed comments, (HDFFV-10037) changed the test for NAG fortran compiler, (HDFFV-10037)
| | * | changed comments, (HDFFV-10037)M. Scot Breitenfeld2017-08-031-4/+4
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| | * | Merge branch 'develop' of ↵M. Scot Breitenfeld2017-08-0323-24/+368
| | |\ \ | | |/ / | |/| | | | | | ssh://bitbucket.hdfgroup.org:7999/~brtnfld/hdf5_msb into develop
| * | | Merge pull request #627 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-08-022-4/+95
| |\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | * commit '3635cc24b0759285eff37fe986e14e368a4a19b1': Fix misnamed file in test script Add h5repack tests for paged aggregation
| | * \ \ Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2017-08-022-17/+19
| | |\ \ \ | | |/ / / | |/| | | | | | | | | | | | | * commit 'a83b6a7c6e6aca1a329c274282c691ffb417abc4': Moved H5PL diagnostic pragmas to comply with old gcc requirements that they be outside of functions.
| * | | | Merge pull request #625 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:h5pl_commit to ↵Dana Robinson2017-08-022-17/+19
| |\ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | develop * commit '81340c609ba5049b34845ff2f06b2025ec5d5b22': Moved H5PL diagnostic pragmas to comply with old gcc requirements that they be outside of functions.
| | * | | | Moved H5PL diagnostic pragmas to comply with old gcc requirements that theyDana Robinson2017-08-022-17/+19
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| | * | | Fix misnamed file in test scriptAllen Byrne2017-08-021-1/+1
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