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* Merge test output file clearing into runTest.cmakeAllen Byrne2016-10-0319-212/+17
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* Move clear-objects inside runTestAllen Byrne2016-10-033-10/+18
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* Merge pull request #55 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to developDana Robinson2016-10-016-7/+7
|\ | | | | | | | | | | | | | | Checkpoint update * commit '4a2669d51f8f839a63c1257c184318cd8c0ce1ae': Correct typo: add ' ' Snapshot release: increment version.
| * Correct typo: add ' 'lrknox2016-10-011-1/+1
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| * Snapshot release: increment version.lrknox2016-10-016-7/+7
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* Merge pull request #54 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop to developDana Robinson2016-10-011-7/+7
|\ | | | | | | | | | | | | Fixes the v16 API failures in the evict-on-close test. * commit 'dd47e42313fd4d76da95b7e48013bcd0d8879434': Changed H5Dcreate to H5Dcreate2 in test/evict_on_close.c
| * Changed H5Dcreate to H5Dcreate2 in test/evict_on_close.cDana Robinson2016-10-011-7/+7
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* Merge pull request #53 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2016-09-303-11/+35
|\ | | | | | | | | | | * commit '2299ff06c3dd9d5dee5320999a282f1526c27be7': Correct variable name Fix error reporting
| * Correct variable nameAllen Byrne2016-09-301-2/+2
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| * Fix error reportingAllen Byrne2016-09-303-9/+33
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* | Merge pull request #52 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop to developDana Robinson2016-09-3024-42/+1027
|\ \ | |/ |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Merged evict-on-close feature from branch (via develop in cloned repo). * commit 'cbc260e636e258cc55d9fb8fdafd3bff0877ac23': (21 commits) - Removed BRANCH.txt and MANIFEST entry - Fixed a missing line in H5Dint.c - Removed non-implemented code from H5Gint.c - Removed commented-out debug code from H5Dint.c - Added blank lines to eliminate delta in a fortran file. Added full implementation of EoC cache test. Added code to create the test file for all chunk index and layout types. Fleshed out evict on close test that inspects cache. Added the beginnings of a file generator to the test. Fixed typo Added "Purpose:" information to the API call comments for the new functions. Cleaned up feature for dissemination to LLNL: - Removed support for datatypes. - Commented out support for groups - General change clean-up - Added a list of improvements to BRANCH.txt Removed blank line in Fortran file (leftover from last commit) Reverted H5T code since datatypes will not be supported at this time. Fixed format_convert and fortran files (bad merge?). Updated manifest. Was missing BRANCH.txt. Added missing evict on close test file line to test/CMakeLists.txt. [svn-r30110] Added missing evict_on_close.c file to test/. [svn-r30108] Moved group flush and evict code to H5G_close from H5Gclose. [svn-r30107] Moved dataset flush and evict code to H5D_close from H5Dclose. [svn-r30106] Moved datatype close code to new internal function. H5Oclose() now supports evict-on-close for datatypes. [svn-r30105] Datatypes and Groups now support evict-on-close. [svn-r30084] First pass at the evict-on-close feature. ...
| * - Removed BRANCH.txt and MANIFEST entryDana Robinson2016-09-303-23/+1
| | | | | | | | - Fixed a missing line in H5Dint.c
| * - Removed non-implemented code from H5Gint.cDana Robinson2016-09-303-27/+2
| | | | | | | | | | - Removed commented-out debug code from H5Dint.c - Added blank lines to eliminate delta in a fortran file.
| * Merge branch 'develop' into evict_on_closeDana Robinson2016-09-3025-260/+682
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* | Merge pull request #46 in HDFFV/hdf5 from ↵Quincey Koziol2016-09-2916-141/+449
|\ \ | | | | | | | | | | | | | | | | | | | | | | | | ~KOZIOL/hdf5:features/warning_cleanups to develop * commit '5a7880183025f56421cf6f2274d9f1ac36f59641': Clean up hardcoded constants and check return values better. (Comments from group code review) Description: Cleanups from Dana's review. Description: Further warning cleanups: from 667 warnings to 503.
| * | Clean up hardcoded constants and check return values better. (Comments fromQuincey Koziol2016-09-296-43/+62
| | | | | | | | | | | | group code review)
| * | Description:Quincey Koziol2016-09-293-6/+6
| | | | | | | | | | | | | | | | | | | | | | | | Cleanups from Dana's review. Tested on: MacOSX/64 10.11.5 (amazon) w/C++ & FORTRAN (h5committest forthcoming)
| * | Description:Quincey Koziol2016-09-2716-120/+409
| | | | | | | | | | | | Further warning cleanups: from 667 warnings to 503.
* | | Merge pull request #42 in HDFFV/hdf5 from ~NFORTNE2/hdf5_nf:talos-0179 to ↵Neil Fortner2016-09-231-1/+5
|\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | develop * commit '748d6f318c5ebe4fa7ee5d8e4ca2681d69792b70': Change check for number of dimensions for old-style arrays in datatype decoding routine from an assertion to an if/HGOTO_ERROR check, since it is inappropriate to assert the contents of a file will be what we expect.
| * \ \ Merge branch 'develop' into talos-0179Neil Fortner2016-09-2319-58/+2228
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| * | | | Change check for number of dimensions for old-style arrays in datatype ↵Neil Fortner2016-09-081-1/+5
| | | | | | | | | | | | | | | | | | | | decoding routine from an assertion to an if/HGOTO_ERROR check, since it is inappropriate to assert the contents of a file will be what we expect.
* | | | | Merge pull request #41 in HDFFV/hdf5 from ~NFORTNE2/hdf5_nf:talos-0177 to ↵Neil Fortner2016-09-231-25/+74
|\ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | develop * commit '866d17f57f47414b6e778d63fcdcc2a82b208683': Fix bug in "nooptype" decode in fix for TALOS-0177. Fix issues in H5Znbit.c where the decompression algorithm would not check the compressed data for validity, potentially causing a buffer overflow.
| * \ \ \ \ Merge branch 'develop' into talos-0177Neil Fortner2016-09-2319-58/+2228
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| * | | | | Fix bug in "nooptype" decode in fix for TALOS-0177.Neil Fortner2016-09-091-1/+1
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| * | | | | Fix issues in H5Znbit.c where the decompression algorithm would not check ↵Neil Fortner2016-09-081-24/+73
| | |/ / / | |/| | | | | | | | | | | | | the compressed data for validity, potentially causing a buffer overflow.
* | | | | Merge pull request #40 in HDFFV/hdf5 from ~NFORTNE2/hdf5_nf:talos-0176 to ↵Neil Fortner2016-09-231-1/+2
|\ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | develop * commit '62d7562fbd6c6f9f2892cc9a3894f5a68a2b6fdc': Replace assertion in H5O_dtype_decode_helper for number of array dimensions with a check and error. The assertion was inappropriate because it is operating on data read from the file, which the library does not always have direct control of.
| * \ \ \ \ Merge branch 'develop' into talos-0176Neil Fortner2016-09-2319-58/+2228
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| * | | | | Replace assertion in H5O_dtype_decode_helper for number of array dimensions ↵Neil Fortner2016-09-011-1/+2
| | |/ / / | |/| | | | | | | | | | | | | with a check and error. The assertion was inappropriate because it is operating on data read from the file, which the library does not always have direct control of.
* | | | | Merge pull request #38 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2016-09-214-1/+8
|\ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '583af563d9f7eb8cedba6a8bb12d3218f55addf6': Add missing target depends command Correct clear objects working dir
| * | | | | Add missing target depends commandAllen Byrne2016-09-212-0/+5
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| * | | | | Correct clear objects working dirAllen Byrne2016-09-212-1/+3
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* | | | | Merge pull request #37 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2016-09-212-34/+99
|\ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'bc1d833a80190a83bb11151f2d60035acdae3d2c': Fix typo Add missing SH to target name Add gen file technique to HL and test fortran libraries
| * | | | | Fix typoAllen Byrne2016-09-211-1/+1
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| * | | | | Add missing SH to target nameAllen Byrne2016-09-211-1/+1
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| * | | | | Add gen file technique to HL and test fortran librariesAllen Byrne2016-09-212-35/+100
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* | | | | Merge pull request #35 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2016-09-201-6/+39
|\ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '60adc706e6c8bdee4a2e9a7c211f2f2a12dfc355': Add WORKING_DIR to command Add target depends require separate folders
| * | | | | Add WORKING_DIR to commandAllen Byrne2016-09-201-0/+2
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| * | | | | Add target depends require separate foldersAllen Byrne2016-09-201-6/+37
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* | | | | Merge pull request #34 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2016-09-201-7/+7
|\ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '347501aba2962691988e73ddb1b384397e507a80': Add another source property Update generated files commands and properties
| * | | | | Add another source propertyAllen Byrne2016-09-201-0/+1
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| * | | | | Update generated files commands and propertiesAllen Byrne2016-09-201-7/+6
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* | | | | Merge pull request #33 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2016-09-201-37/+20
|\ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | * commit 'e9d582a034b68a4b4485e2c71c089d9e52b63d52': Chage command proces to generate file before use.
| * | | | | Chage command proces to generate file before use.Allen Byrne2016-09-201-37/+20
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* | | | | Merge pull request #31 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2016-09-192-29/+1
|\ \ \ \ \ | |_|/ / / |/| | | | | | | | | | | | | | * commit 'ef2e93d23988b44c663b6df583edecd2e604f009': Eliminate unreferenced local variable warning
| * | | | Eliminate unreferenced local variable warningAllen Byrne2016-09-192-29/+1
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| | | * Merge branch 'evict_on_close' of ↵Dana Robinson2016-09-301-2/+14
| | | |\ | | | | | | | | | | | | | | | https://bitbucket.hdfgroup.org/scm/~derobins/hdf5_der into evict_on_close
| | | | * Added "Purpose:" information to the API call comments for theDana Robinson2016-09-231-2/+14
| | | | | | | | | | | | | | | | | | | | new functions.
| | | | * Merge pull request #32 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:evict_on_close ↵Dana Robinson2016-09-19341-10515/+15374
| | | | |\ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | to evict_on_close Sync with develop and cleaned up feature. Feature works with datasets but testing is minimal. * commit '2646f917adb5b2e17404260e433dc3ed7c39a602': (102 commits) Cleaned up feature for dissemination to LLNL: - Removed support for datatypes. - Commented out support for groups - General change clean-up - Added a list of improvements to BRANCH.txt Removed blank line in Fortran file (leftover from last commit) Reverted H5T code since datatypes will not be supported at this time. Fixed format_convert and fortran files (bad merge?). Updated manifest. Was missing BRANCH.txt. Add missing command to set shared generated file Add default site names Separate fortran generation into static and shared folders. Revert to using old set command Change string to list - older usage Add option to submit to Cdash Change UPDATE_TYPE to git Update CMake java functions Added missing evict on close test file line to test/CMakeLists.txt. Restrict git commit hash in tar file names to first 7 characters with --short option. Add longer timeout to cache tests - test has consistently exceeded default timing. Removed -p option from invocation of autogen.sh by h5vers script to allow running h5vers on machines without /usr/hdf/bin/AUTOTOOLS. Add bin/pkgscrpts files to MANIFEST. dd bin/pkgscrpts directory with scripts to package deployed unix binaries into tarfiles. Purpose: Code cleanup Description: - Used FP_EPSILON in comparing float values to verify read data - Casted C macro to fix mismatched types in verify_val calls Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test) ...
| | | * | | Added full implementation of EoC cache test.Dana Robinson2016-09-301-13/+30
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| | | * | | Added code to create the test file for all chunk index and layout types.Dana Robinson2016-09-303-15/+335
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