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* Merge pull request #601 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-07-132-11/+12
|\ | | | | | | | | | | | | * commit 'b3a212e54b86e15ea059d856db8685f43cc00829': HDFFV-10254 Fix spelling HDFFV-10254 release note HDFF-10254 - Copy test files with macro to avoid POST_BUILD failure
| * HDFFV-10254 Fix spellingAllen Byrne2017-07-131-1/+1
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| * HDFFV-10254 release noteAllen Byrne2017-07-121-2/+10
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| * HDFF-10254 - Copy test files with macro to avoid POST_BUILD failureAllen Byrne2017-07-121-9/+2
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* | Merge pull request #596 in HDFFV/hdf5 from GreaterThan-2GB-MPIO to developRichard Warren2017-07-136-48/+2637
|\ \ | |/ |/| | | | | | | | | | | | | * commit '6a5aa46e936340ed540359290374fa909f9213a6': Added a brief outline for Large MPI-IO transfers into RELEASE.txt Fix up the ExpressMode check for skipping slow running tests. Include code fixes and additional modifications pointed out by code reviewers Commited changes to the development branch here to allow a pull request to be published Commit changes needed for pull request
| * Added a brief outline for Large MPI-IO transfers into RELEASE.txtRichard Warren2017-07-131-1/+23
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| * Fix up the ExpressMode check for skipping slow running tests.Richard Warren2017-07-101-1/+1
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| * Include code fixes and additional modifications pointed out by code reviewersRichard Warren2017-07-105-15/+73
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| * Commited changes to the development branch here to allow a pull request to ↵Richard Warren2017-07-051-46/+458
| | | | | | | | be published
| * Commit changes needed for pull requestRichard Warren2017-07-051-0/+2097
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* | Merge pull request #597 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to ↵Vailin Choi2017-07-115-8/+121
|\ \ | | | | | | | | | | | | | | | | | | develop * commit '8935c921f7e50607cd91c86b2237ac39a9b600af': Fix for HDFFV-10217 infinite loop in H5VM_power2up(). The function H5VM_power2up() returns the next power of 2 for n. When n exceeds 2^63, it overflows and becomes 0 causing the infinite looping. The fix ensures that the function checks for n >= 2^63 and returns 0.
| * | Fix for HDFFV-10217 infinite loop in H5VM_power2up().Vailin Choi2017-07-105-8/+121
|/ / | | | | | | | | | | The function H5VM_power2up() returns the next power of 2 for n. When n exceeds 2^63, it overflows and becomes 0 causing the infinite looping. The fix ensures that the function checks for n >= 2^63 and returns 0.
* | Merge pull request #594 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:test_misc13 to ↵Dana Robinson2017-07-051-142/+140
|\ \ | |/ |/| | | | | | | | | develop * commit '191147ec90d72619632a24242c003ecb3bccfffd': * Yanked the smoke check that was recently introduced to test the unused H5I_REFERENCE ID type in test_misc19(). This fails when running testhdf5 and skipping the reference test since the H5R package won't be initialized. H5I_REFERENCE will be going away soon and the ID type is unused so there's really no point to doing anything to test it. * Cleaned up test_misc13(), which is a basic test of userblock functionality, to not emit warnings due to the large global array.
| * * Yanked the smoke check that was recently introduced to testDana Robinson2017-07-051-142/+140
| | | | | | | | | | | | | | | | | | | | | | the unused H5I_REFERENCE ID type in test_misc19(). This fails when running testhdf5 and skipping the reference test since the H5R package won't be initialized. H5I_REFERENCE will be going away soon and the ID type is unused so there's really no point to doing anything to test it. * Cleaned up test_misc13(), which is a basic test of userblock functionality, to not emit warnings due to the large global array.
* | Merge pull request #590 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:java_warnings ↵Dana Robinson2017-07-051-0/+1
|\ \ | | | | | | | | | | | | | | | | | | to develop * commit '5d6ed0b298e3a40051a975a466820030360e8a31': Turned off unused parameter warnings in gcc for Java constants.
| * | Turned off unused parameter warnings in gcc for Java constants.Dana Robinson2017-07-031-0/+1
| |/ | | | | | | | | | | | | None of the constant functions use their parameters, so emitting warnings for them generates a large amount of noise. Since these are trivial wrappers, marking them up with H5_ATTR_UNUSED would be a huge waste of time.
* | Merge pull request #591 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to ↵Vailin Choi2017-07-052-1/+20
|\ \ | |/ |/| | | | | | | | | develop * commit '1e1403cf1d959d5a88b2ff595096ee52af26db58': Skip HDFFV-10160 filenotclosed test for split/multi driver Temporary skip this test for split/multi driver. Further investigation to resolve the failure is needed. Please enter the commit message for your changes. Lines starting
| * Skip HDFFV-10160 filenotclosed test for split/multi driverVailin Choi2017-07-052-1/+20
|/ | | | | | Temporary skip this test for split/multi driver. Further investigation to resolve the failure is needed. Please enter the commit message for your changes. Lines starting
* Merge pull request #589 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:tmisc19 to developDana Robinson2017-07-0310-285/+303
|\ | | | | | | | | | | | | | | | | | | * commit '9a749a64f06187bc5ae17e848eab9aacdfc57f8a': More minor whitespace cleanup Fixed a minor comment typo in H5R.c * Reverted removal of H5I_REFERENCE to avoid breaking binary compatibility. * Added a quick H5I_REFERENCE smoke check to test_misc19() in tmisc.c. Added missing free() call to test_misc19(). Purged the unused H5I_REFERENCE from the library. Added a test for VFD IDs to testhdf5.
| * More minor whitespace cleanupDana Robinson2017-07-031-3/+3
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| * Fixed a minor comment typo in H5R.cDana Robinson2017-07-031-1/+1
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| * * Reverted removal of H5I_REFERENCE to avoid breaking binaryDana Robinson2017-07-0322-5/+157
| | | | | | | | | | | | compatibility. * Added a quick H5I_REFERENCE smoke check to test_misc19() in tmisc.c.
| * Added missing free() call to test_misc19().Dana Robinson2017-07-011-0/+2
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| * Purged the unused H5I_REFERENCE from the library.Dana Robinson2017-07-0120-127/+22
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| * Added a test for VFD IDs to testhdf5.Dana Robinson2017-07-015-257/+226
|/ | | | | | | This required adding some code to generate a fake VFD class to pass to H5FDregister(). Also, a bunch of whitespace and comment tidying.
* Merge pull request #586 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to ↵Vailin Choi2017-06-3010-5/+232
|\ | | | | | | | | | | | | develop * commit '804a88fafdca3d6a76312ab01ac4d6d5b103e9dc': Fix for HDFFV-10160 Modifications to fix the assertion/abort failure when the application does not close the file.
| * Fix for HDFFV-10160Vailin Choi2017-06-2910-5/+232
| | | | | | | | Modifications to fix the assertion/abort failure when the application does not close the file.
* | Merge pull request #588 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop to developDana Robinson2017-06-291-8/+0
|\ \ | | | | | | | | | | | | | | | | | | * commit 'd2c7df4ac005e461df3a486791560821ab7b4585': Revert "Partial removal of NDEBUG ifdefs from the library." Partial removal of NDEBUG ifdefs from the library. Removed compiler flag cleanup since Solaris chokes on it.
| * | Revert "Partial removal of NDEBUG ifdefs from the library."Dana Robinson2017-06-2918-76/+111
| | | | | | | | | | | | This reverts commit a2b7560aa6fa960b2aecddeab331b2b13d485d4f.
| * | Merge branch 'develop' of ↵Dana Robinson2017-06-291-8/+0
| |\ \ | | | | | | | | | | | | https://bitbucket.hdfgroup.org/scm/~derobins/hdf5_der into develop
| | * | Removed compiler flag cleanup since Solaris chokes on it.Dana Robinson2017-06-291-8/+0
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| * | Partial removal of NDEBUG ifdefs from the library.Dana Robinson2017-06-2918-111/+76
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* | Merge pull request #585 in HDFFV/hdf5 from ↵Dana Robinson2017-06-293-5/+4
|\ \ | |/ |/| | | | | | | | | ~DEROBINS/hdf5_der:configure_fortran_long_double_bug to develop * commit '8c347d794a06b8b57c407499e1a441cc0f415380': Fixed a bug in autotools Fortran processing where a test for the presence of a C long double type always returned true.
| * Fixed a bug in autotools Fortran processing where a test for theDana Robinson2017-06-293-5/+4
| | | | | | | | presence of a C long double type always returned true.
* | Merge pull request #584 in HDFFV/hdf5 from ↵Dana Robinson2017-06-291-16/+15
|\ \ | |/ |/| | | | | | | | | | | ~DEROBINS/hdf5_der:minor_develop_fixes to develop * commit 'cbca178410215a1fd60e3de85c4810487e327f8d': Updated the --enable-debug/production handling in configure.ac so that it more reliably indicates that the configure option can no longer be used. Previously, using --enable-debug="", etc. would not trigger an error (even though such usage is unlikely). Added awk processing to remove extraneous whitespace from H5_ flags in configure.
| * Updated the --enable-debug/production handling in configure.acDana Robinson2017-06-281-16/+7
| | | | | | | | | | | | so that it more reliably indicates that the configure option can no longer be used. Previously, using --enable-debug="", etc. would not trigger an error (even though such usage is unlikely).
| * Added awk processing to remove extraneous whitespace from H5_Dana Robinson2017-06-281-0/+8
|/ | | | flags in configure.
* Merge pull request #583 in HDFFV/hdf5 from ↵Dana Robinson2017-06-281-4/+5
|\ | | | | | | | | | | | | ~DEROBINS/hdf5_der:minor_develop_fixes to develop * commit 'd85aeb770496a08d1e0ce9fcabbfc54f15f44864': Fixed a comment in configure.ac
| * Fixed a comment in configure.acDana Robinson2017-06-271-4/+5
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* Merge pull request #582 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-06-265-10/+29
|\ | | | | | | | | | | | | | | * commit 'c325dd2a6512ce02287771bfbbe9b81d65b3fd6f': HDFFV-10219 another mode change HDFFV-10219 change subset to use BINARY mode for h5dump HDFFV-10219 default input binary to NATIVE Set default of var to NATIVE
| * HDFFV-10219 another mode changeAllen Byrne2017-06-261-1/+1
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| * HDFFV-10219 change subset to use BINARY mode for h5dumpAllen Byrne2017-06-261-1/+1
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| * HDFFV-10219 default input binary to NATIVEAllen Byrne2017-06-203-7/+26
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| * Set default of var to NATIVEAllen Byrne2017-06-201-1/+1
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* Merge pull request #581 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-06-197-43/+38
|\ | | | | | | | | | | | | * commit '00f4456e70c7e53226085b4a96d3bab3fd0074f0': HDFFV-10219 - disable h5dump tests until h5import NATIVE is fixed Correct name of options variable Synch with CMake original code
| * HDFFV-10219 - disable h5dump tests until h5import NATIVE is fixedAllen Byrne2017-06-192-4/+4
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| * Correct name of options variableAllen Byrne2017-06-191-3/+3
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| * Synch with CMake original codeAllen Byrne2017-06-194-36/+31
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* Merge pull request #574 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-06-1618-279/+1260
|\ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '1ac4b918f182b6fc43e57788e9af0c4cce64efba': HDFFV-10219 remove standard headers already included in h5private.h HDFFFV-10219 fix file creation contention on windows HDFFV-10219 - fix name templates HDFFV-10219 add test headers HDFFV-10219 - remove debug comments HDFFV-10219 - Fix subset test HDFFV-10219Fix binary test to use gen files Add subset tests to script Fix changes to reference files. Still need to add subset test. Update release note HDFFV-10219 - disable debug output HDFFV-10219 Add new reference file file for new test HDFFV-10219 - fix for native in bin file and possible non-native in h5 HDFFV-10219: add generated files to memcheck clear command HDFFV-10219: Added keyword SUBSET to h5import list.
| * HDFFV-10219 remove standard headers already included in h5private.hAllen Byrne2017-06-161-5/+0
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