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* Changed default dataset shared struct to initialize hid_t IDs toDana Robinson2020-04-021-0/+3
| | | | H5I_INVALID_HID.
* Merge pull request #2363 in HDFFV/hdf5 from ~DYOUNG/werror:thread_id to developDavid Young2020-04-011-39/+77
|\ | | | | | | | | | | * commit '63c95faf49559ea66e3066427961095b69fdb213': Remove tongue-in-cheek credit for Rusty Shackleford and Dale Alvin Gribble. Follow HDF5 conventions.
| * Remove tongue-in-cheek credit for Rusty Shackleford and Dale Alvin Gribble.David Young2020-02-101-21/+0
| | | | | | | | | | | | | | | | | | | | | | | | Delete the comment questioning whether pthread_mutex_lock is allowed in a key destructor, since pthread_key_create(3) provides the answer: There is no notion of a destructor-safe function. If an application does not call pthread_exit() from a signal handler, or if it blocks any signal whose handler may call pthread_exit() while calling async-unsafe functions, all functions may be safely called from destructors. Delete redundant comment.
| * Follow HDF5 conventions.David Young2020-02-071-30/+89
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* | Merge pull request #2483 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor ↵Dana Robinson2020-04-017-105/+107
|\ \ | | | | | | | | | | | | | | | | | | to develop * commit 'b1533616f28996983ec505fff8f62edf3dd820b3': Minor renaming in the tools code.
| * | Minor renaming in the tools code.Dana Robinson2020-03-317-105/+107
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* | Merge pull request #2479 in HDFFV/hdf5 from ~GHEBER/hdf5:bugfix/HDFFV-11065 ↵Gerd Heber2020-03-301-0/+2
|\ \ | | | | | | | | | | | | | | | | | | to develop * commit '2dfc047bc4aca7c13bccf44da97bff026cbbf5a6': Fix for HDFFV-11065.
| * | Fix for HDFFV-11065.Gerd Heber2020-03-291-0/+2
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* | | Merge pull request #2478 in HDFFV/hdf5 from tools_vol_update to developJordan Henderson2020-03-293-46/+53
|\ \ \ | |/ / |/| | | | | | | | * commit '9676029742f18aaae37dd48947bc1faf23406169': Fix latent bug in h5repack options file reading Add 'enable-error-stack' option to h5format_convert
| * | Fix latent bug in h5repack options file readingJordan Henderson2020-03-293-46/+53
| | | | | | | | | | | | Add 'enable-error-stack' option to h5format_convert
| * | Merge pull request #2476 in HDFFV/hdf5 from ↵Dana Robinson2020-03-2882-570/+1242
| |\ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:tools_vol_update to tools_vol_update * commit 'f5cb547825e462c3299b6f41d03a71aa6faef950': (29 commits) Minor renaming in h5dump (addr --> token) Correct macro check Add extensive warnings to tools executables Reorg comments Correct warning flag form Because of tools macro, this needs to be a warning unused set-variable in macro Fix Werror issues in JNI and tools TRILAB-192 fix JNI shadow warning TRILAB-192 restrict extensive warnings to libraries TRILAB-24 use CHECK_STRUCT_HAS_MEMBER TRILAB-192 add release note TRILAB-192 Identify warnings that fail as errors Correct failure when allocation tracking are disabled. Update the MANIFEST for the autoconf/cmake shared warnings files. Correct syntax Update CMake compiler flags to use same set of warnings Revise API for H5get_alloc_stats() to take a struct instead of separate values. Allow use of INTEL icl/icl++ for clang Move the GNU warnings configuration under config/gnu-warnings/ and trim the filename prefixes. Update config/gnu-flags to suit. ...
* | \ \ Merge pull request #2471 in HDFFV/hdf5 from alloc_stat_tests to developQuincey Koziol2020-03-281-55/+33
|\ \ \ \ | |_|/ / |/| | | | | | | | | | | * commit '0eb562bc201a38f9b4a82e954bfc63daa6838d45': Refactor to reduce verbosity.
| * | | Refactor to reduce verbosity.Quincey Koziol2020-03-261-55/+33
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* | | | Merge pull request #2475 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor ↵Dana Robinson2020-03-282-30/+30
|\ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | to develop * commit '2dd6075c7a13ba7cbaa922448df4bd5e72c1b5ab': Minor renaming in h5dump (addr --> token)
| * | | | Minor renaming in h5dump (addr --> token)Dana Robinson2020-03-282-30/+30
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* | | | Merge pull request #2473 in HDFFV/hdf5 from tools_vol_update to developAllen Byrne2020-03-271-2/+3
|\ \ \ \ | | |/ / | |/| | | | | | | | | | * commit 'feb0f521b16b79485c22c86a630a1d91cb680a61': Fix some missing symbols issues in tools library
| * | | Fix some missing symbols issues in tools libraryJordan Henderson2020-03-271-2/+3
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* | | | Merge pull request #2470 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2020-03-273-88/+20
|\ \ \ \ | | | | | | | | | | | | | | | | | | | | * commit '07a66822fb1350955150295fcd6d9f53d3b7ee15': TRILAB-24 use CHECK_STRUCT_HAS_MEMBER
| * \ \ \ Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2020-03-2724-778/+1176
| |\ \ \ \ | |/ / / / |/| | | | | | | | | | | | | | | | | | | | | | | | * commit 'd5bbf3d4086d7fa0300325a08a608f1cc7b4ce33': A few small tweaks to the tools from review Replace usage of some standard library functions with HD- versions Update Tools library to be better compatible with VOL connectors
* | | | | Merge pull request #2469 in HDFFV/hdf5 from tools_vol_update to developJordan Henderson2020-03-2724-778/+1176
|\ \ \ \ \ | | |/ / / | |/| / / | |_|/ / |/| | | | | | | | | | | * commit 'ea952b25ba0fd5c4b5f60a94e75a1b5b78e66172': A few small tweaks to the tools from review Replace usage of some standard library functions with HD- versions Update Tools library to be better compatible with VOL connectors
| * | | A few small tweaks to the tools from reviewJordan Henderson2020-03-274-131/+139
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| * | | Replace usage of some standard library functions with HD- versionsJordan Henderson2020-03-262-4/+4
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| * | | Update Tools library to be better compatible with VOL connectorsJordan Henderson2020-03-1727-762/+1166
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Modify h5repack to integrate with VOL connectors Update tools library to accomodate VOL connectors Update logic in h5tools_fopen for VOL connectors Add command-line options to h5repack for specifying in/out VOL connectors Implement h5tools_set_vol_fapl Fix library shutdown issue Integrate ROS3 and HDFS VFDs into new h5tools_get_fapl() scheme Avoid H5Ocopy in h5repack when using different VOL connectors Update h5tools_test_utils.c for ROS3 and HDFS integration
| | * | Merge pull request #12 in ~BYRN/hdf5_adb from ↵Allen Byrne2020-03-263-88/+20
| | |\ \ | |/ / / |/| | | | | | | | | | | | | | | | | | | bugfix/TRILAB-24-check_struct_has_member to develop * commit 'abbeb0cab2380adf8ffb1f81ef2e88960241a6d3': TRILAB-24 use CHECK_STRUCT_HAS_MEMBER
| | * | TRILAB-24 use CHECK_STRUCT_HAS_MEMBERAllen Byrne2020-03-243-88/+20
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* | | | Merge pull request #2467 in HDFFV/hdf5 from alloc_stats_2 to developQuincey Koziol2020-03-251-1/+1
|\ \ \ \ | | | | | | | | | | | | | | | | | | | | * commit 'a3e08862c614463d16eb1017303e5fec44518b09': Correct macro check
| * | | | Correct macro checkQuincey Koziol2020-03-251-1/+1
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* | | | Merge pull request #2464 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2020-03-2523-159/+321
|\ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '27b23c8d52e89e9ce15dc9cb9685be85793a5d82': Add extensive warnings to tools executables Reorg comments Correct warning flag form Because of tools macro, this needs to be a warning unused set-variable in macro Fix Werror issues in JNI and tools TRILAB-192 fix JNI shadow warning TRILAB-192 restrict extensive warnings to libraries TRILAB-192 add release note TRILAB-192 Identify warnings that fail as errors Correct syntax Update CMake compiler flags to use same set of warnings Allow use of INTEL icl/icl++ for clang
| * | | | Add extensive warnings to tools executablesAllen Byrne2020-03-258-0/+22
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| * | | | Reorg commentsAllen Byrne2020-03-251-4/+22
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| * | | | Correct warning flag formAllen Byrne2020-03-251-1/+1
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| * | | | Because of tools macro, this needs to be a warningAllen Byrne2020-03-251-1/+3
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| * | | | unused set-variable in macroAllen Byrne2020-03-251-0/+1
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| * | | | Fix Werror issues in JNI and toolsAllen Byrne2020-03-246-12/+13
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| * | | | TRILAB-192 fix JNI shadow warningAllen Byrne2020-03-245-10/+1
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| * | | | TRILAB-192 restrict extensive warnings to librariesAllen Byrne2020-03-248-144/+140
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| * | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2020-03-241-0/+12
| |\ \ \ | |/ / / |/| | | | | | | | | | | * commit '765cd82d2e650e089e11539c10d6be4fbdbad984': Correct failure when allocation tracking are disabled.
* | | | Merge pull request #2463 in HDFFV/hdf5 from alloc_stats_fix to developQuincey Koziol2020-03-241-0/+12
|\ \ \ \ | | | | | | | | | | | | | | | | | | | | * commit '60e446113ff9056806b1c1f80dab058418cdbef7': Correct failure when allocation tracking are disabled.
| * | | | Correct failure when allocation tracking are disabled.Quincey Koziol2020-03-241-0/+12
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| | * | | TRILAB-192 add release noteAllen Byrne2020-03-241-0/+15
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| | * | | TRILAB-192 Identify warnings that fail as errorsAllen Byrne2020-03-242-11/+72
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| | * | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2020-03-241-3/+34
| | |\ \ \ | |_|/ / / |/| | | | | | | | | | | | | | * commit 'ca64f7e7e9ee028520f6496120b327dfbd0395f2': Update the MANIFEST for the autoconf/cmake shared warnings files.
* | | | | Merge pull request #2462 in HDFFV/hdf5 from ↵Allen Byrne2020-03-241-3/+34
|\ \ \ \ \ | |/ / / / |/| | | | | | | | | | | | | | | | | | | | | | | | ~DYOUNG/werror:gnu-warnings-manifest to develop * commit '43e5a896975379eb7e363a0bb892a976eb2e15b6': Update the MANIFEST for the autoconf/cmake shared warnings files.
| * | | | Update the MANIFEST for the autoconf/cmake shared warnings files.David Young2020-03-241-3/+34
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| * | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2020-03-2410-212/+571
| |\ \ \ | |/ / / |/| | | | | | | | | | | | | | | * commit 'd3ef866a2963ce93d0b95184534a70849b6fa11d': Revise API for H5get_alloc_stats() to take a struct instead of separate values. Add routines to query the library's free list sizes and allocation stats.
* | | | Merge pull request #2445 in HDFFV/hdf5 from alloc_stats to developQuincey Koziol2020-03-2310-212/+571
|\ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'b51585a9110c4322c52f9dcdc60cd26c3ea44546': Revise API for H5get_alloc_stats() to take a struct instead of separate values. Add routines to query the library's free list sizes and allocation stats.
| * | | | Revise API for H5get_alloc_stats() to take a struct instead of separate values.Quincey Koziol2020-03-206-99/+64
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| * | | | Merge remote-tracking branch 'origin/develop' into alloc_statsQuincey Koziol2020-03-206-4/+48
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| * \ \ \ \ Merge remote-tracking branch 'origin/develop' into alloc_statsQuincey Koziol2020-03-185-5/+23
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| * \ \ \ \ \ Merge remote-tracking branch 'origin/develop' into alloc_statsQuincey Koziol2020-03-121-5/+5
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