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* Replace deprecated Fortran 'include mpif.h' with 'USE mpi' (#4031)Christoph Niethammer2024-02-213-5/+3
| | | | | | With MPI 4.1 the use of the mpif.h include file has been deprecated. Codes should transition to USE mpi or USE mpi_f08. Signed-off-by: Christoph Niethammer <niethammer@hlrs.de>
* Check argument for CMake REGEX FCMangle.h. (#4029)H. Joe Lee2024-02-211-2/+8
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* Test vlen sequence IO in API tests (#4027)mattjala2024-02-212-0/+485
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* Replaced last sprintf with snprintf (#4007)Sean McBride2024-02-2021-48/+79
| | | | | | | * Replaced last sprintf with snprintf To have the size of the buffer, it was required to change a function signature, and change all users of it. In most cases, determining the buffer size wasn't trivial and so SIZE_MAX is passed. But at least this improves the infrastructure. Someone can later figure out the correct sizes.
* Remove oneapi return value warning. (#4028)H. Joe Lee2024-02-191-0/+1
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* Grep for error messages instead of comparing files (#4024)Allen Byrne2024-02-163-19/+21
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* Correct String FIND for runTest and grepTest (#4022)Allen Byrne2024-02-155-28/+51
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* Delete old snapshot binaries after new snapshots are created (#4020)Allen Byrne2024-02-153-1/+91
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* included best practices of using coll. metadata APIs (#4018)Scot Breitenfeld2024-02-159-8/+154
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* Add compound subset ops on attributes to API tests (#4005)mattjala2024-02-142-0/+269
| | | | * Add partial compound io on attributes to API tests
* separate out individual checks for string removal (#4015)Allen Byrne2024-02-141-0/+4
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* Add C in project line for CMake to fix #4012. (#4014)H. Joe Lee2024-02-143-3/+3
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* Update install texts (#4010)Glenn Song2024-02-146-28/+22
| | | | | | | | * Update INSTALL_CMake.txt as necessary * Update remaining docs that use HDF5_USE_GNU_DIRS * Update options in HDFMacros in HDF5Examples
* Fix some output issues with ph5diff (#4008)jhendersonHDF2024-02-132-6/+8
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* Don't add files and directories with names that begin with ., or that match ↵Larry Knox2024-02-132-1/+2
| | | | | *autom4te* to release tar & zip files. (#4009) Filter messages with 'ulimit -s' out of test output for runTest.cmake.
* Add hl and cpp ABI reports to daily build (#4006)Allen Byrne2024-02-132-0/+33
| | | | * Add other non-fortran lib abi reports * removing hl_cpp abi reports because of lack of public symbols
* Issue #1824: Replaced most remaining sprintf with safer snprint (#4003)Sean McBride2024-02-1313-90/+93
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* Add a missing file into Makefile.am for MinGW Autotools build error. (#4004)H. Joe Lee2024-02-131-1/+1
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* remove incorrect check for environ (#4002)Allen Byrne2024-02-092-2/+0
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* Modern C++ dtor declarations (#1830)Sean McBride2024-02-0950-335/+38
| | | | | | | | * C++ dtor modernization - Replaced a bunch of empty dtors with `= default` - Removed deprecated `throw()`. In C++11, dtors are `noexcept` by default. *
* Fix build issue and some warnings in H5_api_dataset_test.c (#3998)jhendersonHDF2024-02-091-12/+5
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* Fix incompatible pointer type warnings in object reference examples (#3999)jhendersonHDF2024-02-092-2/+2
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* Fix overwritten preset names (#4000)Allen Byrne2024-02-092-14/+16
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* Updated information about obtaining the HDF5 source code to use the repos. ↵bmribler2024-02-081-10/+3
| | | | (#3972)
* Remove oneapi/clang compiler printf() type warning. (#3994)H. Joe Lee2024-02-082-2/+2
| | | * Remove oneapi/clang compiler printf() type warning from h5ex_t_opaque.c.
* Fix h5watch test failures to ignore system warnings on ppc64le. (#3997)Larry Knox2024-02-081-2/+3
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* Add abi-complience check and upload to releases (#3996)Allen Byrne2024-02-087-18/+185
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* Fix broken links caused by examples relocation. (#3995)H. Joe Lee2024-02-081-2/+2
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* Fix for github issue #2414: segfault when copying dataset with attrib… (#3967)vchoi-hdfgroup2024-02-061-2/+6
| | | | | | | | | | * Fix for github issue #2414: segfault when copying dataset with attributes. This also fixes github issue #3241: segfault when copying dataset. Need to set the location via H5T_set_loc() of the src datatype when copying dense attributes. Otherwise the vlen callbacks are not set up therefore causing seg fault when doing H5T_convert() -> H5T__conv_vlen().
* Sync API tests with vol-tests (#3940)mattjala2024-02-066-154/+1911
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* Update README with new release info (#3993)Dana Robinson2024-02-061-1/+2
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* Update release schedule (#3992)Dana Robinson2024-02-062-15/+12
| | | | * Add 2024, remove 2022 * Update README.md
* Bump the github-actions group with 6 updates (#3981)dependabot[bot]2024-02-067-27/+27
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bumps the github-actions group with 6 updates: | Package | From | To | | --- | --- | --- | | [EndBug/add-and-commit](https://github.com/endbug/add-and-commit) | `9.1.3` | `9.1.4` | | [actions/setup-java](https://github.com/actions/setup-java) | `3` | `4` | | [ilammy/msvc-dev-cmd](https://github.com/ilammy/msvc-dev-cmd) | `1.12.1` | `1.13.0` | | [actions/download-artifact](https://github.com/actions/download-artifact) | `4.1.0` | `4.1.1` | | [actions/cache](https://github.com/actions/cache) | `3` | `4` | | [github/codeql-action](https://github.com/github/codeql-action) | `3.22.12` | `3.23.2` | Updates `EndBug/add-and-commit` from 9.1.3 to 9.1.4 - [Release notes](https://github.com/endbug/add-and-commit/releases) - [Commits](https://github.com/endbug/add-and-commit/compare/1bad3abcf0d6ec49a5857d124b0bfb52dc7bb081...a94899bca583c204427a224a7af87c02f9b325d5) Updates `actions/setup-java` from 3 to 4 - [Release notes](https://github.com/actions/setup-java/releases) - [Commits](https://github.com/actions/setup-java/compare/v3...v4) Updates `ilammy/msvc-dev-cmd` from 1.12.1 to 1.13.0 - [Release notes](https://github.com/ilammy/msvc-dev-cmd/releases) - [Commits](https://github.com/ilammy/msvc-dev-cmd/compare/v1.12.1...v1.13.0) Updates `actions/download-artifact` from 4.1.0 to 4.1.1 - [Release notes](https://github.com/actions/download-artifact/releases) - [Commits](https://github.com/actions/download-artifact/compare/f44cd7b40bfd40b6aa1cc1b9b5b7bf03d3c67110...6b208ae046db98c579e8a3aa621ab581ff575935) Updates `actions/cache` from 3 to 4 - [Release notes](https://github.com/actions/cache/releases) - [Changelog](https://github.com/actions/cache/blob/main/RELEASES.md) - [Commits](https://github.com/actions/cache/compare/v3...v4) Updates `github/codeql-action` from 3.22.12 to 3.23.2 - [Release notes](https://github.com/github/codeql-action/releases) - [Changelog](https://github.com/github/codeql-action/blob/main/CHANGELOG.md) - [Commits](https://github.com/github/codeql-action/compare/012739e5082ff0c22ca6d6ab32e07c36df03c4a4...b7bf0a3ed3ecfa44160715d7c442788f65f0f923) --- updated-dependencies: - dependency-name: EndBug/add-and-commit dependency-type: direct:production update-type: version-update:semver-patch dependency-group: github-actions - dependency-name: actions/setup-java dependency-type: direct:production update-type: version-update:semver-major dependency-group: github-actions - dependency-name: ilammy/msvc-dev-cmd dependency-type: direct:production update-type: version-update:semver-minor dependency-group: github-actions - dependency-name: actions/download-artifact dependency-type: direct:production update-type: version-update:semver-patch dependency-group: github-actions - dependency-name: actions/cache dependency-type: direct:production update-type: version-update:semver-major dependency-group: github-actions - dependency-name: github/codeql-action dependency-type: direct:production update-type: version-update:semver-minor dependency-group: github-actions ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
* Remove ADB signature from RELEASE.txt. (#3986)H. Joe Lee2024-02-061-1/+0
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* Add a missing left parenthesis in RELEASE.txt. (#3990)H. Joe Lee2024-02-061-1/+1
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* chore: fix typo (#3989)H. Joe Lee2024-02-061-1/+1
| | | close #144
* Make platform specific test presets for windows and macs (#3988)Allen Byrne2024-02-064-8/+104
| | | | | * Enable mac tests * Add platform test workflows to examples
* Skip mac bintest until more reliable (#3983)Allen Byrne2024-02-021-0/+1
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* corrected warning: implicit conversion changes signedness (#3982)Scot Breitenfeld2024-02-021-1/+1
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* Fixed spacing issues in example tests. (#3979)Scot Breitenfeld2024-02-0210-33/+43
| | | * The space difference in the Fortran examples must be fixed to match the expected output for compression filter examples.
* Add h5dump tests that require subfiling VFD (#3879)H. Joe Lee2024-02-018-1/+48
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* Create CITATION.cff (#3927)Stefano Probst2024-02-011-0/+12
| | | Add citation source based on http://web.archive.org/web/20230610185232/https://portal.hdfgroup.org/display/knowledge/How+do+I+properly+cite+HDF5%2C+HDFView%2C+and+HSDS+in+a+paper. Created with https://citation-file-format.github.io/cff-initializer-javascript/
* append '-WF,' when passing C preprocessor directives to the xlf compiler (#3976)Scot Breitenfeld2024-02-011-3/+8
| | | | | * append '-WF,' when passing C preprocessor directives to the xlf compiler * strip path from compiler name
* Clarify vlen string datatype message (#3950)mattjala2024-01-311-5/+19
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* Replace 'T2' with ' ' to avoid failure to match expected output due to (#3975)Larry Knox2024-01-315-25/+25
| | | system tab difference.
* Add binary testing to CI testing (#3971)Allen Byrne2024-01-3111-215/+542
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * Add binary test job * Correct names of jobs * Add build mode to binary names * Limit packaging execution * Make mac DragNDrop optional * Format if checks * fix checks for TS * Allow examples to be packaged * Correct if NOT format * Correct configure and workflow call * Separate out CMake/Autotools Parallel job * Correct binary examples path * Correct dir path for windows test * Correct paths and add extlibs * Windows binaries do not have a share folder
* Explicitly use PROJECT_BINARY_DIR in target copy location (#3974)Allen Byrne2024-01-302-31/+31
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* h5 compiler wrappers now pass all arguments passed to it to the compile line ↵Scot Breitenfeld2024-01-306-38/+109
| | | | | | | (#3954) * The issue was that the "allargs" variable was not being used in the final command of the compiler wrapper. Any entries containing an escaped quote (\", \') or other non-matching argument (*) would not be passed to the compile line. I have fixed this problem by ensuring all arguments passed to the compiler wrapper are now included in the compile line. * added testing for compiler wrappers
* Fixed XL and gfortran errors (#3968)Scot Breitenfeld2024-01-303-9/+13
| | | | | * fixed XL and Gfortran errors * fixed data type len array
* Added a GitHub Codespaces configuration. (#3966)Gerd Heber2024-01-303-0/+34
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