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* [svn-r20315] brought revisions 19868:20300 from the 1.8.6_vms branch to the ↵Raymond Lu2011-03-2415-16/+76
| | | | trunk for VMS work
* [svn-r20312] Change incorrect use of "struct stat" to use "h5_stat_t". Allen Byrne2011-03-244-58/+68
| | | | | | | Also removed includes from top of file - they are included with proper config checks in h5private.h. Changed name of Windows only gettimeofday function to avoid a define loop according to VS2008 Tested: local linux, windows
* [svn-r20310] Change incorrect use of "struct stat" to use "h5_stat_t". On ↵Allen Byrne2011-03-242-20/+4
| | | | | | windows, this used the wrong structure and caused crashes. Also removed includes from top of file - they are included with proper config checks in h5private.h. Tested: local linux, windows
* [svn-r20307] The TEST_REFERENCE EOL adjustment block needs to be included in ↵Allen Byrne2011-03-241-8/+8
| | | | the SKIP_COMPARE IF block
* [svn-r20305] Add tests to h5import and 80% of h5jamAllen Byrne2011-03-234-32/+647
| | | | Tested: local linux
* [svn-r20294] Purpose:Jonathan Kim2011-03-2225-1219/+10562
| | | | | | | | | | | | | | | | Fixed CHICAGO: Bug 2121 - h5diff - incorrect and lack of output for the different set of attributes (different number and names) Description: Previously h5diff compared attributes correctly only when two objects have the same number of attributes and attribute names are identical. This fix covers all other cases. Also didn't display useful information about attribute difference. This fixes both issues. Tested: jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE)
* [svn-r20285] Purpose:Jonathan Kim2011-03-216-58/+75
| | | | | | | | | | | | | | | | | Improve the previous fix for Bug 2216 - GMQS: h5diff - memory leak when compares vlen string in dataset or attributes Description: Related to the previous checkin r20270 and r20266. Improve h5tools_detect_vlen() code for better performance. H5Tdetect_class already recusive on given type so don't need to be part of recusive call again. Also improve error handlings in h5tools_detect_vlen and h5tools_detect_vlen_str functions. Also updated h5ls and h5dump code accordingly. Tested: jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Cmake - jam
* [svn-r20282] Corrected expected fail tests for use during valgrindAllen Byrne2011-03-191-0/+3
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* [svn-r20274] Purpose:Jonathan Kim2011-03-182-7/+8
| | | | | | | | | | | | | | Fixed Bug 2214 - GMQS: h5diff - memory leak in diff() Description: Memory leaks occurred when accessing symbolic links with --follow-symlink option. Test cases are in testing script. (400 - 456, 501 - 518) An example test : valgrind --leak-check=full h5diff --follow-symlinks -v h5diff_softlinks.h5 h5diff_softlinks.h5 Tested: jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Cmake - jam
* [svn-r20270] Purpose:Jonathan Kim2011-03-187-21/+60
| | | | | | | | | | | | | | | | Improve the previous fix for Bug 2216 - GMQS: h5diff - memory leak when compares vlen string in dataset or attributes Description: Improve the fix along with the previous checkin r20266. Add a new function to tool lib, h5tools_detect_vlen_data() which return TRUE if include any kind of vlen data all at once, either VLEN-data or VLEN-string and so on. Also updated h5ls and h5dump code accordingly. Tested: jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Cmake - jam
* [svn-r20267] Corrected expected fail tests for use during valgrindAllen Byrne2011-03-181-25/+6
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* [svn-r20266] Purpose:Jonathan Kim2011-03-172-46/+67
| | | | | | | | | | | | | | Fixed Bug 2216 - GMQS: h5diff - memory leak when compares vlen string in dataset or attributes Description: Test for dataset : valgrind --leak-check=full ./h5diff -v h5diff_dset1.h5 h5diff_dset2.h5 /g1/VLstring Test for attr : valgrind --leak-check=full ./h5diff h5diff_attr1.h5 h5diff_attr2.h5 Both test cases are in testing script. Tested: jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Cmake - jam
* [svn-r20265] Cleanup due to project file syncing with 1.8 branchAllen Byrne2011-03-175-50/+10
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* [svn-r20262] In my previous checkin (20255), I used H5Gcreate instead of ↵Raymond Lu2011-03-161-1/+1
| | | | | | | | H5Gcreate2 in my test. I just corrected it . Tested on jam.
* [svn-r20260] Windows compilers insist that variable declarations are before ↵Allen Byrne2011-03-161-5/+5
| | | | assignement statements
* [svn-r20257] Corect name of test in test propertyAllen Byrne2011-03-161-1/+1
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* [svn-r20255] Bug 2115 - add H5_VERSION_GE and H5_VERSION_LE macros. I added ↵Raymond Lu2011-03-151-1/+68
| | | | | | a new test case to show how to use them. Tested on jam and amani.
* [svn-r20254] Description:Jonathan Kim2011-03-153-6/+6
| | | | | | | | | h5ls is used to verify for the result, so change the two tests not to run h5diff like others. This is related to the previous checkin SVN r18398 for Bug#1733. Tested: jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), cmake (jam)
* [svn-r20252] Add comment that indicates a "2" in the resultcode param means ↵Allen Byrne2011-03-151-0/+1
| | | | "skip h5diff" component of test
* [svn-r20251] Correct expected fail tests to check a result code of NOT 0Allen Byrne2011-03-151-2/+2
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* [svn-r20250] Enable memcheck of h5stat and h5diff toolsAllen Byrne2011-03-151-147/+0
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* [svn-r20249] Add test properties to H5LS for expected failAllen Byrne2011-03-153-27/+45
| | | | Add SKIPPED to test name if test skipped, also do not run skipped tests if doing memcheck
* [svn-r20247] Change name of new VLEN function from H5Tdetect_vlen_str to ↵Allen Byrne2011-03-144-10/+20
| | | | | | | | h5tools_detect_vlen_str to match other functions in tools lib. Added back test for H5Tdetect_class of H5T_VLEN after each instance of above function to catch all VLEN types in h5dump. Tested: local linux
* [svn-r20243] Update CMake version to 2.8.4Allen Byrne2011-03-141-1/+1
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* [svn-r20241] Corrected an error in the comments for H5Oget_comment(_by_name) ↵Raymond Lu2011-03-142-3/+3
| | | | | | | | and H5G_loc_get_comment_cb: the return value is the size of the comment excluding NULL terminator. No test is needed.
* [svn-r20239] Add HDFGroup to PACKAGE_NAME, as parent folder name for CPack ↵Allen Byrne2011-03-141-1/+1
| | | | installation configuration.
* [svn-r20231] Purpose:Jonathan Kim2011-03-117-6/+32
| | | | | | | | | | Fixed Bug 1904 - h5ls : usage of '-a' option is not clear to display expected output Description: Fixed incorrect content and improved help page for -a option of h5ls. Tested: jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), Cmake (jam)
* [svn-r20228] Add tools bin folder to installation variablesAllen Byrne2011-03-101-0/+1
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* [svn-r20226] Entered known problem of --with-mpe does not work with mpich2.Albert Cheng2011-03-101-0/+2
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* [svn-r20224] Add enable-error-stack option to new features-tools section.Allen Byrne2011-03-102-258/+17
| | | | Enable h5stat tests for valgrind testing.
* [svn-r20223] Adding notes for fixing h5dump bug on -y -o options.Peter Cao2011-03-101-0/+3
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* [svn-r20222] Correct mistake by declaring indexing variable removed from for ↵Allen Byrne2011-03-101-0/+1
| | | | at top of function.
* [svn-r20221] Remove rougue 'int' inside for loop (cut-paste error) - windows ↵Allen Byrne2011-03-101-1/+1
| | | | complained.
* [svn-r20219] Description:Quincey Koziol2011-03-103-7/+7
| | | | | | | | | | | | | | | | | Tell the VFL flush call that the file will be closing, allowing the VFDs to avoid sync'ing the file (particularly valuable in parallel). Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, w/threadsafe, in production mode Linux/PPC 2.6 (heiwa) w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in debug mode
* [svn-r20218] Valgrind fix for memory leak in print_datatype which used an ↵Allen Byrne2011-03-091-1/+3
| | | | | | allocation function in a printf(). Tested: local linux and valgrind
* [svn-r20217] Valgrind indicated error in reading past end of buffer.Allen Byrne2011-03-091-1/+4
| | | | Tested: local linux and valgrind
* [svn-r20216] Valgrind fix for memory leak in h5tools_dump_xxx which is fixed ↵Allen Byrne2011-03-094-4/+90
| | | | | | | | by adding a new function; htri_t H5Tdetect_vlen_str(hid_t tid) to h5tools. This needs to be called before any H5Aread/H5Dread and if TRUE, then call vlen_reclaim function after the corresponding h5tools_dump_xxx(). Tested: local linux and valgrind
* [svn-r20211] Valgrind indicated error in writing past buffer. Contary to ref ↵Allen Byrne2011-03-091-1/+1
| | | | | | man H5O_get_comment does not return null char in size. Tested: local linux and valgrind
* [svn-r20209] add test case for -y -o for h5dumpPeter Cao2011-03-091-0/+6
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* [svn-r20208] Valgrind fix for memory leak in free_tables - 2nd malloc was ↵Allen Byrne2011-03-091-0/+4
| | | | | | freed by free_table calls but not the first malloc. Added HDfree('table') after each free_table() call. Tested: local linux and valgrind
* [svn-r20207] removed duplicate line.Peter Cao2011-03-091-1/+0
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* [svn-r20206] Updated manifest and source code for fixing h5dump -y -o problemPeter Cao2011-03-093-9/+13
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* [svn-r20205] Add tall-6.ddl from previous commit r20204.Jonathan Kim2011-03-081-0/+1
| | | | Test file for Bug 2183 - h5dump -y -o prints out attribute values
* [svn-r20204] Add test case for check -y -o optionsPeter Cao2011-03-081-0/+27
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* [svn-r20203] Purpose:Jonathan Kim2011-03-085-9/+60
| | | | | | | | | | | | | Fix Bug 2120 - h5copy: improve to copy an object into same HDF file Description: Before the fix users can't copy an object (dataset or group) with different name if input file (-i) and output file (-o) is same. This feature would be useful to clone any object with different name and reuse contents. Tested: jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Cmake (jam)
* [svn-r20202] Correct order of tests DEPENDSAllen Byrne2011-03-081-7/+3
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* [svn-r20201] Order fflush tests - fflush2 DEPENDS on fflush1Allen Byrne2011-03-081-0/+1
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* [svn-r20200] Add expected fail condition to memcheck alternate tests.Allen Byrne2011-03-082-0/+18
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* [svn-r20197] Change test macro to allow control of infile and outfile parametersAllen Byrne2011-03-081-4/+8
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* [svn-r20195] Description: Fixed memory leaks (valgrind detected) in ↵Scot Breitenfeld2011-03-072-5/+9
| | | | | | field_info and make tables routines. Tested: jam (gnu and intel compilers)
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