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* [svn-r19783] Fix to the checkin for bug #1930.Vailin Choi2010-11-151-1/+6
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* [svn-r19782] Fix CMake testing for links_env test which requires an ↵Allen Byrne2010-11-155-4/+58
| | | | | | | | environment variable at test run-time. Modified runTest.cmake file to allow optional ENV_VAR and ENV_VALUE to be passed. runTest.cmake requires a reference file, added links_env.out to testfiles folder. Also updated root CMakeLists.txt to output a message when unsopported options are configured with the PARALLEL option. CMake will still generate files. Tested: windows and local linux
* [svn-r19781] Fix for bug #1930:Vailin Choi2010-11-159-119/+267
| | | | | | 1) Move the test for H5D_EXT_PREFIX in links.c to a separate file: links_env.c 2) links_env.c will be used by testlinks_env.sh to test for the environmental variable H5D_EXT_PREFIX in searching for the external linked file.
* [svn-r19779] Comment out H5_SIZEOF_PTRDIFF_T define to fix Windows errors.Allen Byrne2010-11-131-1/+1
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* [svn-r19776] Corrected handling of largefile and linux_lfs handling.Allen Byrne2010-11-124-11/+49
| | | | | Synched cmake version of H5pubconf.h.in Added another variation of H5detect warning to ignore list.
* [svn-r19769] Correct comment about VS defines and next releaseAllen Byrne2010-11-121-1/+1
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* [svn-r19767] Problem:Albert Cheng2010-11-111-1/+1
| | | | | | | | The parallel test ran out of memory because 32bit binary default to use less memory. Changed RUNPARALLEL to use larger memory (LDR_CNTRL=MAXDATA=0x2000 0000@DSA). Tested: BP parallel.
* [svn-r19764] Updated NPROCS default value from 3 to 6.Albert Cheng2010-11-114-126/+228
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* [svn-r19759] Purpose:Jonathan Kim2010-11-111-4/+12
| | | | | | | | | | | | | | | | | | Fix compile error for Windows from previous checkin r19757. Description: Previous log: Improve h5diff performance. The following changes for improving h5diff performance: 1) use HDmemcmp() before comparing each elements (memcmp() is very fast at both linew and jam) 2) replace the expensive H5Tequals() calls 3) retrieve datatype information at dataset level not each element level for compound datasets Tested: jam (linux32-LE), Windows
* [svn-r19757] Purpose:Jonathan Kim2010-11-113-36/+136
| | | | | | | | | | | | | | | | Improve h5diff performance. Description: The following changes for improving h5diff performance: 1) use HDmemcmp() before comparing each elements (memcmp() is very fast at both linew and jam) 2) replace the expensive H5Tequals() calls 3) retrieve datatype information at dataset level not each element level for compound datasets Tested: jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE)
* [svn-r19753] Added flush2 to list of memcheck ignore - flush2 needs flush1 ↵Allen Byrne2010-11-101-0/+1
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* [svn-r19751] Purpose:Jonathan Kim2010-11-099-2/+99
| | | | | | | | | | | | | | Fixed Bug# 1979 Output from h5ls -rdlS on nested compound datatypes is difficult to parse. Description: Update to add curly brackets for the nested compound members, when S (--simple) option is used with -l (--label), so user can tell which members blong to which compound type. Tested: jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32)
* [svn-r19744] Description:Quincey Koziol2010-11-081-38/+46
| | | | | | | Clean up compiler warnings and neaten up code a bit. Tested on: Linxu/64 2.6.32 (ember) w/parallel
* [svn-r19743] Description:Quincey Koziol2010-11-082-194/+42
| | | | | | | | | Correct tests to use native datatypes consistently, and also to use "normal" methods for performing collective I/O. Also, minor cleanups for zeroing out buffers, etc. Tested on: AIX/64 6.? (bp) w/parallel
* [svn-r19740] Snapshot version 1.9 release 79HDF Tester2010-11-0714-29/+29
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* [svn-r19737] Added another version of H5detect warning to ignore listAllen Byrne2010-11-051-0/+3
| | | | | | Added H5convert warning to ignore list Added flush1 to list of memcheck ignore - design precludes valgrind correctness
* [svn-r19731] Purpose:Jonathan Kim2010-11-051-1/+1
| | | | | | | | | | | | | Fix the test script from the previous checkin r19729. expect output is under misc/testfiles/ in srcdir. Previous Log: [BZ2072]Add compare output to expected test for help and version options of mkgrp. Tested: jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE)
* [svn-r19729] Purpose:Jonathan Kim2010-11-041-3/+3
| | | | | | | | | | | | | Fix the test script from the previous checkin r19726 due to contiguous build system failure. Previous Log: [BZ2072]Add compare output to expected test for help and version options of mkgrp. Tested: jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE)
* [svn-r19726] [BZ2072]Add compare output to expected test for help and ↵Allen Byrne2010-11-046-6/+80
| | | | | | version options of mkgrp. Tested: local linux
* [svn-r19725] Description:Quincey Koziol2010-11-042-1/+4
| | | | | | | | | | Add a little bit of extra info to the output from h5debug when displaying global heaps, and make it dump the file's superblock again when an address is not given on the command line. Tested on: FreeBSD/32 6.3 (duty) w/debug (too minor to require h5committest)
* [svn-r19722] Bug fix for failure in the round robin metadata write ojbect headerJohn Mainzer2010-11-031-0/+3
| | | | | | | metadata confusion test that appeared after Albert modified the test. Cursory commit test. No test on Abe as that system is down, the fix is very minor, and it seems to work in the 1.8.6 branch
* [svn-r19721] Correct CDash project nameAllen Byrne2010-11-031-2/+2
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* [svn-r19717] Correct external lib handling for WindowsAllen Byrne2010-11-021-8/+10
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* [svn-r19712] Purpose:Jonathan Kim2010-11-028-30/+411
| | | | | | | | | | | | | | | Fixed h5diff to handle variable-length strings in a compound dataset correctly. Also variable-length string array in a compound dataset. Bug #1989. Description: Garbage values were displayed when h5diff compared variable-length strings (or string array) in a compound type dataset. Tested: jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), tejeda (Mac32)
* [svn-r19709] Updated Dashboard Timeout settingAllen Byrne2010-11-021-12/+13
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* [svn-r19706] Added VFD test options.Allen Byrne2010-11-016-7/+204
| | | | Bring r19705 from branch
* [svn-r19702] Removed special fheap timeout - replaced by timeout set in ↵Allen Byrne2010-11-013-10/+441
| | | | | | | CTestConfig.ctest Added MemCheck Ignore tests for repeated tools tests Added Debug flag for windows
* [svn-r19701] Snapshot version 1.9 release 78HDF Tester2010-10-3114-29/+29
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* [svn-r19697] Description:Quincey Koziol2010-10-291-0/+129
| | | | | | | | | Add another test for shutting down open object IDs without using the standard "close" routines. Tested on: Mac OS X/32 10.6.4 (amazon) w/debug & production (too minor to require h5committest)
* [svn-r19696] Bug 2008 - IBM Power6 Linux uses special conversion algorithms ↵Raymond Lu2010-10-284-0/+399
| | | | | | | | | | | to convert some values from long double to (unsigned) long and from (unsigned) long to long double. I added tests in configure.in to detect these algorithms. Before I can figure out them, I disable the tests in dt_arith.c. There are property changes to tools/misc, config, and Makefile.am when I brought the fix from 1.8. Tested on jam, heiwa, amani, IBM Power6 Linux machine in Holland (huygens.sara.nl).
* [svn-r19694] Changed the default NPROCS from 3 to 6 for MPI tests.Albert Cheng2010-10-282-12/+12
| | | | | Tested: in jam only since that is that only parallel tests h5committest would have done.
* [svn-r19691] Added new h5copy testAllen Byrne2010-10-281-7/+44
| | | | Tested: local linux
* [svn-r19686] Spelling mistake in TARGET_WIN_PROPERTIES broke cmake configurationAllen Byrne2010-10-281-1/+1
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* [svn-r19682] Bug 2054: Round Robin code caused H5FFlush to corrupt a file.Albert Cheng2010-10-282-113/+493
| | | | | | | | | John Mainzer fixed the bug and added a test which wrote file and flush a few time; close the file then open it by serial and read simple structure. I changed the test to two parallel running parts of ..._writer and ..._reader and have the reader verify the file after every flush by the writer. Tested: parallel in Jam and Amani.
* [svn-r19679] Added h5mkgrp testsAllen Byrne2010-10-273-1/+93
| | | | | | Added valgrind test variables and increased Tested: Local linux
* [svn-r19674] MPI_ checks were failing due to wrong #include of mpi.h in ↵Allen Byrne2010-10-271-2/+1
| | | | | | cmake setup From Community
* [svn-r19668] Description:Quincey Koziol2010-10-262-7/+28
| | | | | | | | | | Do some extra range-checking on H5Pset_elink_acc_flags() calls. Clean up some minor compiler warnings also. Tested on: Mac OS X/32 10.6.4 (amazon) w/debug & production (too minor to require h5committest)
* [svn-r19666] Snapshot version 1.9 release 77HDF Tester2010-10-2414-28/+28
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* [svn-r19664] Add warnings to CDash ignore listAllen Byrne2010-10-221-2/+4
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* [svn-r19660] Add tab char to regex for warningsAllen Byrne2010-10-221-2/+2
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* [svn-r19656] Description:Quincey Koziol2010-10-211-4/+5
| | | | | | | | | Move B-tree sanity checking down below revised node unprotect calls in H5B_insert(). Tested on: Mac OS X/32 10.6.4 (amazon) w/debug=all (too obscure to require h5committest)
* [svn-r19654] Description:Quincey Koziol2010-10-2119-628/+570
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bring Coverity revisions from branch back to trunk, and clean up some other misc. compiler warnings also. r19500: Fix coverity items 1446 and 1447. Moved up calls to memset in test_cont in ohdr.c so the test never tries to close uninitialized locations. r19501: Fix coverity items 1398-1445. Various uninitialized variable errors in fheap.c. r19502: Fixed coverity issue 579 and some additional warnings in the file as well. r19503: Bug fix: This fix addressed the "RESOURCE_LEAK" problems #789 and 790, run 26 r19504: minor mods to try to keep coverity from flagging false positives. r19505: Fixed coverity issues 566 - 571. Declared variables that are passed to functions that use them as arrays to be arrays of size 1. Tested on: Mac OS X/32 10.6.4 (amazon) w/debug, production & parallel (h5committested on trunk)
* [svn-r19650] Put back deleted library check in configure.Allen Byrne2010-10-202-5/+4
| | | | | | Remove shared library check around ws2_32.lib linking in test library. Issue on windows static builds. Tested: windows
* [svn-r19646] John Mainzer2010-10-191-6/+6
| | | | | | | | | | Replaced calls to H5Dcreate() and H5Acreate() with calls to H5Dcreate2() and H5Acreate2() respectively in t_mdset.c. This was done to repair a compile failure that occured on a build with the --with-default-api-version=v16 config option Cursory commit test
* [svn-r19643] Correct configuration library checks symbol namesAllen Byrne2010-10-191-4/+2
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* [svn-r19638] Description:Quincey Koziol2010-10-195-184/+221
| | | | | | | | | | | | | | | | | | | | | | | Bring some of Neil's changes to help support SWMR access in the v1 B-tree code from the revise_chunks branch back to the trunk. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, w/threadsafe, in production mode Linux/PPC 2.6 (heiwa) w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in debug mode Mac OS X/32 10.6.4 (amazon) in debug mode Mac OS X/32 10.6.4 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode Mac OS X/32 10.6.4 (amazon) w/parallel, in debug mode
* [svn-r19637] Purpose:Jonathan Kim2010-10-191-291/+290
| | | | | | | | | | | | | | Fix nightly build error on non-linux platforms related to the Fix for bug# 2040 - h5copy should fail gracefully for expected failure copying to non-exist nested group without -p option. (r19633) Description: - Updated to use standard C functions instead of strndup() due to failure on non-linux platforms. - Changed to Use HDxxx macros for future reference. - Correct indentation. Tested: jam, amani, heiwa, linew
* [svn-r19633] Purpose:Jonathan Kim2010-10-185-26/+116
| | | | | | | | | | Fix for bug# 2040 - h5copy should fail gracefully for expected failure copying to non-exist nested group without -p option. Description: Fixed h5copy to fail gracefully when copying object to non-exist group without -p option. This is expected to be failed. Tested: jam, amani, heiwa
* [svn-r19632] John Mainzer2010-10-181-1/+1
| | | | | | | Modified test code in t_mdset to use H5Dopen2() instead of H5Dopen1(). This should fix the compile failure when we used --disable-deprecated-symbols Cursory commit test
* [svn-r19628] Because h5diff fix (bug1975) which can compare groups ↵Jonathan Kim2010-10-181-6/+6
| | | | recursively, h5copy diff tests no longer should fail.
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