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* [svn-r22411] reduce compiler warnings by removing unreferenced variables and ↵Allen Byrne2012-05-2510-35/+24
| | | | | | adding cast Tested: local linux
* [svn-r22410] reduce compiler warnings reported by CDash for non-critical issuesAllen Byrne2012-05-251-3/+3
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* [svn-r22406] do not need warnings from utility program.Allen Byrne2012-05-251-0/+1
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* [svn-r22405] HDFFV-8018: add INSTALL commands for packaging the pdb files ↵Allen Byrne2012-05-2418-9/+108
| | | | | | for windows when configured with RelWithDebInfo Tested: local linux and Windows
* [svn-r22396] Correct missing clean filenames in h5dump makeAllen Byrne2012-05-232-16/+7
| | | | Sync 518/trunk version and cpack info
* [svn-r22393] I forgot to close a few datatypes in test_str_create. I fixed ↵Raymond Lu2012-05-231-0/+5
| | | | | | them in this commit. Tested on jam - very simple change.
* [svn-r22392] Added test for h5tcreate_f with H5T_STRING_F option.Scot Breitenfeld2012-05-232-29/+73
| | | | | | Cleaned-up formating and comments for h5tcreate_f. Tested: jam (gnu compiler)
* [svn-r22391] HDFFV-7999: h5dump did not display H5T_DSET_UTF8.Allen Byrne2012-05-227-12/+152
| | | | | | Changed if/else block to switch like in h5ls, and distinguished between ERROR and UNKNOWN. Reviewed by JKM Tested: local linux
* [svn-r22390] Break out the packed bits tests into a new script.Allen Byrne2012-05-228-233/+678
| | | | | reconfigure on jam Tested: local linux
* [svn-r22388] remove unbalanced bracketAllen Byrne2012-05-221-1/+1
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* [svn-r22386] Add missing H5_VERS_SUBRELEASE of version infoAllen Byrne2012-05-211-0/+15
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* [svn-r22385] Skip tests using sparse file writes on Windows. JIRA issue ↵Allen Byrne2012-05-212-1/+9
| | | | (JIRA HDDFV-8064) created.
* [svn-r22382] Snapshot version 1.9 release 118HDF Tester2012-05-2014-30/+30
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* [svn-r22378] removed the parallel #endif by mistake.. oopsMohamad Chaarawi2012-05-182-2/+2
| | | | | remove an un-needed bool
* [svn-r22377] make the file and memory MPI datatypes as default properties in theMohamad Chaarawi2012-05-184-59/+26
| | | | | | | DXPL so that we don't have to insert and remove them everytime we perform collective I/O. Test with h5committest
* [svn-r22375] add a test to expose a memory leak when adding/removing the ↵Mohamad Chaarawi2012-05-182-1/+47
| | | | | | | | same property in property list multiple times. fix that bug. test with h5committest
* [svn-r22373] Purpose: Jonathan Kim2012-05-161-5/+10
| | | | | | | | | | | | | Fix h5repacktst (test file generating binary) to address HDFFV-8016 h5repacktst failed in AIX 32bit mode Description: Segmentation fault occurred when h5repacktst try to generate a dataset when system memory is limited to 256MB. Add error handling to display apporiate message to exit and adjust the test dataset according to the original size which didn't causing out of memory. Tested: test was done by limit memory in csh. jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE)
* [svn-r22371] Fix for HDFFV-7697Dana Robinson2012-05-151-1/+1
| | | | | | Minor change to error message text in H5R.c. Minor change: tested on jam
* [svn-r22369] Change case of filename to match file.Larry Knox2012-05-151-1/+1
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* [svn-r22368] change file name caseAllen Byrne2012-05-141-1/+1
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* [svn-r22366] Added libsettings file to packagingAllen Byrne2012-05-141-0/+5
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* [svn-r22361] Change library source properties: remove "LANGUAGE C" property ↵Allen Byrne2012-05-142-5/+8
| | | | | | from headers. Add "LINKER C" property to link. Tested: local linux
* [svn-r22356] Snapshot version 1.9 release 117HDF Tester2012-05-1314-30/+30
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* [svn-r22346] replace C++ style commentsAllen Byrne2012-05-071-1/+1
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* [svn-r22326] Snapshot version 1.9 release 116HDF Tester2012-04-2914-30/+30
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* [svn-r22324] Description:Quincey Koziol2012-04-291-1/+1
| | | | | | | | Change name of MPE log file produced from "cpilog" (which was the name used in the example code we were referencing) to "h5log". Tested on: None, too trivial, eyeballed only...
* [svn-r22323] Description:Jonathan Kim2012-04-271-2/+3
| | | | | | | | | | The ph5diff (parallel h5diff) can intermittently hang in parallel mode when comparing the two HDF5 files that contains common name objects with different object types. (HDFFV-8003) Skip only the specific test for parallel until the fix has made. Tested: jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE)
* [svn-r22319] Purpose:Jonathan Kim2012-04-2615-6/+129
| | | | | | | | | | | | | | Fix for HDFFV-7998-h5diff: incorrect behavior and output for comparing symbolic dangling links without following-symlinks option Description: Fix not to check and display dangling link status without --follow-symlinks option. Berfor the fix, when comparing symbolic link to symbolic link without follow-symlinks option, h5diff followed to check if those links are dangling or not. It caused to display output incorrectly (dangling link instead of symbolic link). The fix also improved performance when comparing lots of symbolic links without the --follow-symlinks option. Test cases were added and tagged with jira#. Tested: jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Windows (32-LE cmake), Cmake (jam)
* [svn-r22318] Use new function that combines two functions that check for ↵Allen Byrne2012-04-262-12/+4
| | | | | | vlen types. Based on code used in h5ls. Tested: local linux
* [svn-r22312] Description:Quincey Koziol2012-04-231-0/+1
| | | | | | | | Correct error reported by user (Martin Otte) where we weren't using realloc'ed buffer in MPI datatype code. Tested on: Mac OSX/64 10.7.3 (amazon) w/parallel
* [svn-r22311] Snapshot version 1.9 release 115HDF Tester2012-04-2214-30/+30
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* [svn-r22300] Purpose:Jonathan Kim2012-04-192-0/+5
| | | | | | | | | | | Fix for HDFFV-8001 - h5unjam: segfault when used -V (show version) option Description: h5unjam has an option '-V' to display version information. "h5unjam -V" caused segfulat for 1.8.9 pre-release. Tested: jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Windows (32-LE cmake), Cmake (jam)
* [svn-r22287] Description:Quincey Koziol2012-04-1647-2701/+2732
| | | | | | | | Clean up more FUNC_ENTER/FUNC_LEAVE macros and move H5D & H5T code toward the final design (as exemplified by the H5EA & H5FA code). Tested on: Mac OSX/64 10.7.3 (amazon) w/debug & parallel
* [svn-r22286] Snapshot version 1.9 release 114HDF Tester2012-04-1514-30/+30
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* [svn-r22277] Purpose:Jonathan Kim2012-04-1111-23/+235
| | | | | | | | | | | | Fix for HDFFV-7993 - h5repack fails with error "chunk size must be <= maximum dimension size for fixed-sized dimensions" Description: Fixed a failure when change the chunk size of a specified chunked dataset with unlimited max dims. Also took care of converting to contiguous and compact from the dataset. Test cases were added and tagged with jira#. Tested: jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Windows (32-LE cmake), Cmake (jam)
* [svn-r22275] Clear up examples vs applications instances and add minimum file.inactive/H5OcompareAllen Byrne2012-04-111-14/+35
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* [svn-r22263] Use correct index for inserting null terminatorAllen Byrne2012-04-091-9/+9
| | | | Tested: windows under debug
* [svn-r22257] Snapshot version 1.9 release 113HDF Tester2012-04-0814-29/+29
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* [svn-r22247] Added new files and tests to CMakeLists.txtAllen Byrne2012-04-043-7/+67
| | | | Tested: local linux
* [svn-r22246] Changed code comments for h5ltpath_valid_fScot Breitenfeld2012-04-041-1/+1
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* [svn-r22244] Description:Quincey Koziol2012-04-031-3/+3
| | | | | | | | | | | | | | | | | | | | Correct use of deprecated API routines in test routine. Tested on: FreeBSD/32 8.2 (loyalty) w/gcc4.6, w/C++ & FORTRAN, in debug mode FreeBSD/64 8.2 (freedom) w/gcc4.6, w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (koala) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, w/threadsafe, in production mode Linux/PPC 2.6 (ostrich) w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-ia64 2.6 (ember) w/Intel compilers, w/C++ & FORTRAN, in production mode Mac OS X/32 10.6.8 (amazon) in debug mode Mac OS X/32 10.6.8 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r22243] Updated the comments for robodoc inclusion and changed spacing ↵Scot Breitenfeld2012-04-031-69/+68
| | | | | | formatting in the source headers, cosmetic changes only.
* [svn-r22242] Issue 7934 - The data sieve buffer size was for all the ↵Raymond Lu2012-04-023-7/+33
| | | | | | | | | | datasets in the file. It could waste memory if any dataset size is smaller than the sieve buffer size. Now the library picks the smaller one between the dataset size and the sieve buffer size from the file access property. Tested on jam, koala, and ostrich.
* [svn-r22240] Description:Quincey Koziol2012-04-021-2/+2
| | | | Update comment about metadata block size test.
* [svn-r22238] Added comment to explain why FNAME4 is used and cautioned other ↵Albert Cheng2012-04-021-0/+2
| | | | | | files may not work.
* [svn-r22236] Description:Quincey Koziol2012-04-021-1/+1
| | | | | | | Switch 'snprintf' -> 'HDsnprintf' Tested on: (eyeballed only, very simple)
* [svn-r22235] Purpose: Fixed bugs HDFFV-2761 & HDFFV-7852Binh-Minh Ribler2012-04-0219-185/+177
| | | | | | | | | | | | | | | | | | | | Description: - Replaced PredType::NotAtexit() with PredType::AtExit(H5CPP_EXITED); and used PredType::AtExit as a flag to detect when all predefined types have been destroyed. Then, H5close will be called to terminate the library after its being re-initiated when the PredType destructors were activated. This change removed the memory leaks shown by the user's sample program. - Added H5CPP_EXITED for PredType::AtExit to use as a flag - Updated some inaccurate comments - Removed stream functions from FileAccPropList - Replaced H5_VMS with appropriate macro in H5IdComponent.cpp - Corrected many URLs (hdfgroup vs. ncsa) in comments - Replaced std::string with H5std_string in comments Platforms tested: Linux/32 2.6 (jam) Linux/64 2.6 (amani) SunOS 5.10 (linew)
* [svn-r22233] Description:Quincey Koziol2012-04-0113-165/+616
| | | | | | | | | | | | | | | | | Correct several errors in fractal heap code: root indirect block was getting pinned/protected more than once, "single" free space sections weren't getting "re-parented" correctly when the heap transitioned between having a root indirect block and a root direct block, and several related issues. Also cleaned up some warnings in library/tests. Tested on: FreeBSD/32 8.2 (loyalty) w/gcc4.6, w/C++ & FORTRAN, in debug mode FreeBSD/64 8.2 (freedom) w/gcc4.6, w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (koala) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Mac OSX/64 10.7.3 (amazon) w/debug
* [svn-r22229] Description:Quincey Koziol2012-04-014-22/+28
| | | | | | | | | | | | | Add 'H5O_mcdt_search_cb_t' to bin/trace script and re-run the bin/reconfigure script. Tested on: FreeBSD/32 8.2 (loyalty) w/gcc4.6, w/C++ & FORTRAN, in debug mode FreeBSD/64 8.2 (freedom) w/gcc4.6, w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (koala) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode
* [svn-r22224] Description:Quincey Koziol2012-04-012-14/+19
| | | | | | | | | Clean up a few warnings and use constant values for free-space parameters for the metadata block size test. Tested on: Linux/64 2.6.18 (koala) w/production & szip (h5committested also)
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