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* Merge pull request #79 from byrnHDF/developLarry Knox2020-11-123-5/+6
|\ | | | | Correct TARGET variable and CMake config file location
| * Correct TARGET variable and CMake config file locationAllen Byrne2020-11-113-5/+6
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* Merge pull request #78 from gheber/developGerd Heber2020-11-107-115/+2143
|\ | | | | This is the first installment of Doxygen-based documentation for the H5F module.
| * Finished API Compatibility Macros.Gerd Heber2020-11-103-23/+102
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| * Function mappings for 1.8.x.Gerd Heber2020-11-101-0/+222
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| * Added 1.10.x function mappings.Gerd Heber2020-11-101-0/+87
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| * Added 1.12.x function mappings.Gerd Heber2020-11-101-4/+205
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| * About half of the app. compat. mac. document converted.Gerd Heber2020-11-101-0/+115
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| * Updated app. compat macro link.Gerd Heber2020-11-091-1/+1
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| * App. compatibilty macro outline.Gerd Heber2020-11-091-0/+195
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| * First cut of H5F.Gerd Heber2020-11-094-104/+1233
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* | Merge pull request #77 from byrnHDF/developLarry Knox2020-11-107-350/+251
|\ \ | |/ |/| Set doxygen default to normally disabled.
| * Update to latest doxygen.m4Allen Byrne2020-11-093-344/+244
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| * Set doxygen default to normally disabled.Allen Byrne2020-11-094-6/+7
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* | Merge pull request #73 from byrnHDF/developLarry Knox2020-11-0835-63/+4428
|\ \ | |/ | | Add doxygen autconf/cmake support
| * Change doxygen brief variableAllen Byrne2020-11-072-2/+2
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| * Doxygen correct typosAllen Byrne2020-11-042-3/+3
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| * doxygen restore tabsAllen Byrne2020-11-031-4/+4
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| * Doxygen correct PHONY targetAllen Byrne2020-11-032-3/+2
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| * Doxygen add new files and update docsAllen Byrne2020-11-035-53/+45
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| * Doxygen remove obsolete fileAllen Byrne2020-11-031-20/+0
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| * Add doxygen auotoconf and cmake supportAllen Byrne2020-11-0331-6/+4400
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* | Merge pull request #72 from jhendersonHDF/developLarry Knox2020-11-031-2/+4
|\ \ | |/ |/| Change H5R__copy to not assume destination reference storage is initi…
| * Change H5R__copy to not assume destination reference storage is initializedJordan Henderson2020-11-031-2/+4
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* Merge pull request #69 from xantares/mingw3Larry Knox2020-11-027-4/+16
|\ | | | | CMake: Add an option to opt-out static libgcc
| * CMake: Add an option to opt-out static libgccMichel Zou2020-10-317-4/+16
| | | | | | | | | | With sjlj exception model, statically link to libgcc/libstdc++ prevents exceptions to be caught from other dynamic libraries.
* | Merge pull request #67 from xantares/mingw1Larry Knox2020-10-311-1/+1
|\ \ | | | | | | CMake: Set specific INSTALL_DATA_DIR only on MSVC
| * | CMake: Set specific INSTALL_DATA_DIR only on MSVCMichel Zou2020-10-301-1/+1
| | | | | | | | | | | | | | | For MinGW we want INSTALL_DATA_DIR to be set to share instead of . to properly install files in a standard package layout.
* | | Merge pull request #70 from xantares/mingw4Larry Knox2020-10-3114-32/+33
|\ \ \ | |_|/ |/| | CMake: MINGW implies WIN32
| * | CMake: MINGW implies WIN32Michel Zou2020-10-3014-32/+33
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* | Merge pull request #68 from xantares/mingw2Larry Knox2020-10-303-2/+10
|\ \ | | | | | | CMake: Add an option to opt-out MSVC naming convention
| * | CMake: Add an option to opt-out MSVC naming conventionMichel Zou2020-10-303-2/+10
| |/ | | | | | | | | We might want to keep the default mingw import name, see: https://github.com/msys2/MINGW-packages/blob/master/mingw-w64-hdf5/hdf5-default-import-suffix.patch
* | Merge pull request #65 from derobins/minor/mpi_2gb_limitLarry Knox2020-10-301-14/+14
|\ \ | | | | | | Fixes a bit shift issue in an MPI constant
| * | Fixes a bit shift issue in an MPI constantDana Robinson2020-10-291-14/+14
| |/ | | | | | | | | Redefines TWO_GIG_LIMIT to be INT32_MAX instead of 1 << 31, which fixes an issue revealed by compiling with -Wshift-overflow.
* | Merge pull request #66 from derobins/minor/HD_to_H5MMLarry Knox2020-10-306-39/+39
|\ \ | |/ |/| Replaces C standard library memory calls with H5MM equivalents
| * Replaces C std library calls with H5MM equivalentsDana Robinson2020-10-306-39/+39
|/ | | | Mostly H5MM_memcpy in newer VFDs
* Merge pull request #62 from byrnHDF/developLarry Knox2020-10-299-245/+1844
|\ | | | | HDFFV-10868 - add H5Sselect API java wrappers.
| * HDFFV-10868 Corrections from reviewAllen Byrne2020-10-292-22/+22
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| * HDFFV-10868 - add noteAllen Byrne2020-10-281-0/+9
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| * HDFFV-10868 - add H5Sselect API java wrappers.Allen Byrne2020-10-278-244/+1834
| | | | | | Also added javadoc comments to H5E and H5s constants.
* | Merge pull request #64 from derobins/minor/vfd_warning_cleanupLarry Knox2020-10-2913-58/+34
|\ \ | |/ |/| Fixes minor issues in various virtual file drivers
| * Fixes minor issues in various virtual file driversDana Robinson2020-10-2913-58/+34
|/ | | | | | | | | | | | - HDFS VFD files now ignored in the Autotools when the HDFS VFD is not being built. - All VFD init code uses idiomatic H5I_INVALID_HID instead of -1 or FAIL. - The HDFS VFD now includes H5FDdrvr_module.h in the right place. - The HDFS tests in test/hdfs.c no longer pass NULL to VERIFY macros, which raised warnings. - Minor tweaks to fix const, unused variables, etc. warnings in several VFDs.
* Merge pull request #59 from derobins/trivial/HDprefixLarry Knox2020-10-2467-360/+444
|\ | | | | HD prefix updates in src/ and test/
| * Restores erroneously deleted key_id field from S3 VFDDana Robinson2020-10-241-1/+1
| | | | | | | | | | Accidentally deleted while preparing the PR. Only existed in a branch.
| * HD prefix updates in src/ and test/Dana Robinson2020-10-2467-361/+445
| | | | | | | | | | | | | | Adds missing HD prefixes to API calls in src and test. Adds some extra processing to bin/checkposix to keep the noise levels down when running the script (not comprehensive).
* | Merge pull request #56 from derobins/minor/implicit_fallthroughLarry Knox2020-10-237-3/+39
|\ \ | |/ |/| Removes -Wimplicit-fallthrough=5 from the gcc warnings
| * Removes -Wimplicit-fallthrough=5 from the gcc warningsDana Robinson2020-10-227-3/+39
| | | | | | | | | | | | | | | | | | | | | | | | -Wimplicit-fallthrough=3 is added by -Wextra, which we already set. Bumping the warning level only changes how fall-through comments are parsed, with level 5 turning off fall-through comments entirely. This is unnecessary and results in having to do extra work to squash warnings when included external code uses fall-through. This change also adds /* FALLTHROUGH */ comments where H5_ATTR_FALLTHROUGH is used so compilers that don't use attributes but do respect fall-through comments don't raise spurious warnings.
* | Merge pull request #55 from byrnHDF/developLarry Knox2020-10-223-14/+14
|\ \ | |/ |/| Correct SZ options for building plugins
| * Correct SZ options for building pluginsAllen Byrne2020-10-213-14/+14
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* Merge pull request #49 from byrnHDF/developLarry Knox2020-10-202-1/+3
|\ | | | | options corrections
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