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* Added number of integer KINDs found to the header files.M. Scot Breitenfeld2016-09-266-28/+41
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* Added path to source include files when building buidiface.M. Scot Breitenfeld2016-09-262-2/+2
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* Added rule to build buildiface program, without a rule, build would add ↵M. Scot Breitenfeld2016-09-262-2/+9
| | | | repeated compile options when using the NAG compiler.
* Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Scot Breitenfeld2016-09-232-27/+81
|\ | | | | | | | | | | | | | | * commit 'a7fb4ede8601e135433ef2d23bf4bbb466d9f58d': Fix bug in "nooptype" decode in fix for TALOS-0177. Change check for number of dimensions for old-style arrays in datatype decoding routine from an assertion to an if/HGOTO_ERROR check, since it is inappropriate to assert the contents of a file will be what we expect. Fix issues in H5Znbit.c where the decompression algorithm would not check the compressed data for validity, potentially causing a buffer overflow. Replace assertion in H5O_dtype_decode_helper for number of array dimensions with a check and error. The assertion was inappropriate because it is operating on data read from the file, which the library does not always have direct control of.
| * Merge pull request #42 in HDFFV/hdf5 from ~NFORTNE2/hdf5_nf:talos-0179 to ↵Neil Fortner2016-09-231-1/+5
| |\ | | | | | | | | | | | | | | | | | | develop * commit '748d6f318c5ebe4fa7ee5d8e4ca2681d69792b70': Change check for number of dimensions for old-style arrays in datatype decoding routine from an assertion to an if/HGOTO_ERROR check, since it is inappropriate to assert the contents of a file will be what we expect.
| | * Merge branch 'develop' into talos-0179Neil Fortner2016-09-2319-58/+2228
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| | * | Change check for number of dimensions for old-style arrays in datatype ↵Neil Fortner2016-09-081-1/+5
| | | | | | | | | | | | | | | | decoding routine from an assertion to an if/HGOTO_ERROR check, since it is inappropriate to assert the contents of a file will be what we expect.
| * | | Merge pull request #41 in HDFFV/hdf5 from ~NFORTNE2/hdf5_nf:talos-0177 to ↵Neil Fortner2016-09-231-25/+74
| |\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | develop * commit '866d17f57f47414b6e778d63fcdcc2a82b208683': Fix bug in "nooptype" decode in fix for TALOS-0177. Fix issues in H5Znbit.c where the decompression algorithm would not check the compressed data for validity, potentially causing a buffer overflow.
| | * \ \ Merge branch 'develop' into talos-0177Neil Fortner2016-09-2319-58/+2228
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| | * | | Fix bug in "nooptype" decode in fix for TALOS-0177.Neil Fortner2016-09-091-1/+1
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| | * | | Fix issues in H5Znbit.c where the decompression algorithm would not check ↵Neil Fortner2016-09-081-24/+73
| | | |/ | | |/| | | | | | | | | the compressed data for validity, potentially causing a buffer overflow.
| * | | Merge pull request #40 in HDFFV/hdf5 from ~NFORTNE2/hdf5_nf:talos-0176 to ↵Neil Fortner2016-09-231-1/+2
| |\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | develop * commit '62d7562fbd6c6f9f2892cc9a3894f5a68a2b6fdc': Replace assertion in H5O_dtype_decode_helper for number of array dimensions with a check and error. The assertion was inappropriate because it is operating on data read from the file, which the library does not always have direct control of.
| | * \ \ Merge branch 'develop' into talos-0176Neil Fortner2016-09-2319-58/+2228
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| | * | | Replace assertion in H5O_dtype_decode_helper for number of array dimensions ↵Neil Fortner2016-09-011-1/+2
| | | |/ | | |/| | | | | | | | | with a check and error. The assertion was inappropriate because it is operating on data read from the file, which the library does not always have direct control of.
* | | | Misc. cleaning up of the program.M. Scot Breitenfeld2016-09-232-92/+15
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* | | | Added SEQUENCE to derived types for NAG:M. Scot Breitenfeld2016-09-232-3/+4
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Section 81 of the compiler manual, e.g. at http://www.nag.co.uk/nagware/np/r61_doc/np61_manual.pdf covers details about the compiler's internal representations, including " Fortran derived types are translated into C structs. If BIND(C) or SEQUENCE is used, the order of the items within the struct is the same as the order within the derived type definition. Otherwise, the order of items is permuted to put larger types at the front of the struct so as to improve alignment and reduce storage; the C output code can be inspected to determine the ordering used. " Removed INTENT(IN) to fix segfaults in C APIs for TYPE(C_PTR). Tested: NAG (gnu)
* | | | misc. format code-cleanupM. Scot Breitenfeld2016-09-221-6/+0
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* | | | Removed the use of hard-coded integer KINDs.M. Scot Breitenfeld2016-09-221-17/+15
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* | | | Code clean-up.M. Scot Breitenfeld2016-09-221-2/+1
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* | | | Merge branch 'develop' of ↵M. Scot Breitenfeld2016-09-2213-117/+415
|\ \ \ \ | |/ / / | | | | | | | | ssh://bitbucket.hdfgroup.org:7999/~brtnfld/hdf5_msb into develop
| * | | Merge pull request #38 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2016-09-214-1/+8
| |\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | * commit '583af563d9f7eb8cedba6a8bb12d3218f55addf6': Add missing target depends command Correct clear objects working dir
| | * | | Add missing target depends commandAllen Byrne2016-09-212-0/+5
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| | * | | Correct clear objects working dirAllen Byrne2016-09-212-1/+3
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| * | | Merge pull request #37 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2016-09-212-34/+99
| |\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'bc1d833a80190a83bb11151f2d60035acdae3d2c': Fix typo Add missing SH to target name Add gen file technique to HL and test fortran libraries
| | * | | Fix typoAllen Byrne2016-09-211-1/+1
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| | * | | Add missing SH to target nameAllen Byrne2016-09-211-1/+1
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| | * | | Add gen file technique to HL and test fortran librariesAllen Byrne2016-09-212-35/+100
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| * | | Merge pull request #35 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2016-09-201-6/+39
| |\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | * commit '60adc706e6c8bdee4a2e9a7c211f2f2a12dfc355': Add WORKING_DIR to command Add target depends require separate folders
| | * | | Add WORKING_DIR to commandAllen Byrne2016-09-201-0/+2
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| | * | | Add target depends require separate foldersAllen Byrne2016-09-201-6/+37
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| * | | Merge pull request #34 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2016-09-201-7/+7
| |\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | * commit '347501aba2962691988e73ddb1b384397e507a80': Add another source property Update generated files commands and properties
| | * | | Add another source propertyAllen Byrne2016-09-201-0/+1
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| | * | | Update generated files commands and propertiesAllen Byrne2016-09-201-7/+6
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| * | | Merge pull request #33 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2016-09-201-37/+20
| |\ \ \ | | | | | | | | | | | | | | | | | | | | * commit 'e9d582a034b68a4b4485e2c71c089d9e52b63d52': Chage command proces to generate file before use.
| | * | | Chage command proces to generate file before use.Allen Byrne2016-09-201-37/+20
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| * | | Merge pull request #31 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2016-09-192-29/+1
| |\ \ \ | | |_|/ | |/| | | | | | | | | | * commit 'ef2e93d23988b44c663b6df583edecd2e604f009': Eliminate unreferenced local variable warning
| | * | Eliminate unreferenced local variable warningAllen Byrne2016-09-192-29/+1
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| * | Merge pull request #29 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2016-09-191-2/+2
| |\ \ | | | | | | | | | | | | | | | | * commit 'c635d463115efdd60bbcd9654644d6b298fd7cd3': Add missing command to set shared generated file
| | * | Add missing command to set shared generated fileAllen Byrne2016-09-191-2/+2
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| * | Merge pull request #27 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2016-09-193-2/+39
| |\ \ | | | | | | | | | | | | | | | | | | | | * commit '3585b373508ca5ea940fbf6e7d0ffeed1968a6bf': Add default site names Separate fortran generation into static and shared folders.
| | * | Add default site namesAllen Byrne2016-09-162-0/+14
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| | * | Separate fortran generation into static and shared folders.Allen Byrne2016-09-161-2/+25
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| * | Merge pull request #26 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2016-09-161-3/+3
| |\ \ | | | | | | | | | | | | | | | | * commit 'bea6ab9ea44eab3503e7fc3c6f1e7ea0d7c1557a': Revert to using old set command
| | * | Revert to using old set commandAllen Byrne2016-09-161-3/+3
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| * | Merge pull request #25 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2016-09-161-3/+3
| |\ \ | | | | | | | | | | | | | | | | * commit '6a3551eba007e826968361d3525cfa2b9139e553': Change string to list - older usage
| | * | Change string to list - older usageAllen Byrne2016-09-161-3/+3
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| * | Merge pull request #23 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2016-09-156-41/+242
| |\ \ | | | | | | | | | | | | | | | | | | | | | | | | * commit '1963f50928089c0ec4a1ff11d54f652a4ab0a498': Add option to submit to Cdash Change UPDATE_TYPE to git Update CMake java functions
| | * | Add option to submit to CdashAllen Byrne2016-09-152-0/+16
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| | * | Change UPDATE_TYPE to gitAllen Byrne2016-09-151-1/+1
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| | * | Update CMake java functionsAllen Byrne2016-09-153-40/+225
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