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* [svn-r26347] Moves large file and POSIX/GNU defines from AM_CPPFLAGS to ↵Dana Robinson2015-03-033-9/+9
| | | | | | | | | | | | | | | H5_CPPFLAGS, which is where the rest of the #defines reside. The key difference is that AM_CPPFLAGS is exported to h5cc. These #defines are not necessary to consume the HDF5 API and it's bad form to inflict our build configuration on users. In particular, the GNU/POSIX defines could easily conflict with a user's. Fixes: HDFFV-9152 Tested on: h5committest
* [svn-r26338] Remove references to vms and vms files to be updated by this ↵Larry Knox2015-03-021-11/+3
| | | | | | script. VMS has been removed from HDF5 code. Tested on jam.
* [svn-r26333] Eliminates gcc warnings due to -Wunsuffixed-float-constants.Dana Robinson2015-03-0142-382/+436
| | | | | | | | | | | | - Adds 'F' suffixes for most float constants. - A few constants MUST be of type double. These now receive the long double L suffix and are then cast to double. I do this via a new H5_DOUBLE() macro which was added to H5private.h. Fixes: HDFFV-9148 Tested on: h5committest
* [svn-r26331] Revert checking r 26327&8, which added new code and test that ↵Larry Knox2015-02-286-230/+61
| | | | | | fails on solaris and macs. Tested h5committest + emu and quail.
* [svn-r26329] Merge of r26069, r26070, and r26072 from the ↵Dana Robinson2015-02-2766-1216/+132
| | | | | | | | | | | | | | | | | | features/autotools_rework branch. Removed the configure option that allows selective disabling of individual internal filters (fletcher32, shuffle, etc.). This feature mucked up the code with a lot of #ifdefs, saved very little space, and was not scalable to a general scheme for library size reduction. We've decided to remove the feature while we investigate a more general scheme for decreasing the library size. Part of: HDFFV-9086 Tested on: h5committest
* [svn-r26328] Fixed a typo in tmisc.c.Dana Robinson2015-02-271-1/+1
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* [svn-r26327] Added public API functions that expose the C library's memory ↵Dana Robinson2015-02-276-61/+230
| | | | | | | | | | | | allocator for use in filter functions that need to allocate or resize buffers. Intended for use with filter plugins, particularly on Windows, where C runtime (CRT) issues can cause problems. Fixes: HDFFV-9100 tested on: jam (minor, localized change)
* [svn-r26324] Fixes another bug in bin/trace that prevents adding TRACE ↵Dana Robinson2015-02-271-1/+1
| | | | | | | | | | | | macros to API calls that use a FUNC_ENTER macro that does not include parentheses. This does not affect any source code at this time. Part of: HDFFV-9141 Tested on: jam (bin/trace behavior only)
* [svn-r26321] Fix for HDFFV-9042.Scot Breitenfeld2015-02-262-0/+90
| | | | tested: h5commit
* [svn-r26320] Trigger component install optionsAllen Byrne2015-02-261-7/+25
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* [svn-r26311] Merged r26266-7 from features/autotools_reworkDana Robinson2015-02-261-90/+46
| | | | | | | | | Updates the bin/chkmanifest script so that it parses the output of svn commands instead of hacking at the .svn/entries file. This will make the script more future-proof and allows it to work with current Subversion repositories. Tested on: jam (bin/chkmanifest only)
* [svn-r26305] convert dump_dcpl to use switch statementAllen Byrne2015-02-251-241/+189
| | | | | | Add default case refactor out start ctx and end ctx Tested: local linux
* [svn-r26303] remove files with .clog2 extension generated by MPE when doing ↵Mohamad Chaarawi2015-02-2542-92/+94
| | | | make clean.
* [svn-r26302] Description:Quincey Koziol2015-02-259-121/+190
| | | | | | | | | Revise dataspace encode/decode routines to make them work better with future virtual dataset feature. Tested on: Mac OSX/64 10.10.2 (amazon) w/serial (h5committest forthcoming)
* [svn-r26301] Description:Quincey Koziol2015-02-253-3/+99
| | | | | | | | Bring Neil's fix for error in H5S_extent_copy() back to the trunk. Tested on: Mac OSX/64 10.10.2 (amazon) w/serial (h5committest forthcoming)
* [svn-r26300] Description:Quincey Koziol2015-02-253-0/+272
| | | | | | | | | Add H5Sis_regular_hyperslab() and H5Sget_regular_hyperslab() API routines, along with tests. Tested on: Mac OSX/64 10.10.2 (amazon) w/serial (h5committest forthcoming)
* [svn-r26294] Fix for HDFFV-9132.Scot Breitenfeld2015-02-242-1/+32
| | | | tested: h5committest
* [svn-r26280] Removed tab indenting for Fortran source, tab indenting is not ↵Scot Breitenfeld2015-02-232-12/+12
| | | | F2003 standard compliant.
* [svn-r26279] re-commit 26260 that Dana moved out fixing the versioning of ↵Mohamad Chaarawi2015-02-2311-45/+363
| | | | functions to work with v16 default API.
* [svn-r26277] remove filename extensionAllen Byrne2015-02-231-1/+1
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* [svn-r26276] Merged r26075-80, 86 from features/autotools_rework branch.Dana Robinson2015-02-238-587/+83
| | | | | | | | | | | | Cleans up time functions in the autotools input files. Removed deprecated gettimeofday() time zone code and configure processing. Also removed some unused time function configure checks and defines. Fixes: HDFFV-9083 and HDFFV-9085 Tested on: 32-bit linux, serial and parallel (jam) OS X (kite) Solaris (emu)
* [svn-r26275] Merge of r26042, 26083, 26084, 26085 from features/autotools_reworkDana Robinson2015-02-223-105/+94
| | | | | | | | | | | | | | | | - Updated configure.ac so that the direct VFD can now be built without specifying _GNU_SOURCE, etc. on the command line. - The direct VFD is now disabled by default. It was previously enabled, but the configuration script couldn't configure it properly, making it a moot point. Fixes: HDFFV-9057, HDFFV-7567, HDFFV-9088, HDFFV-7566 Tested on: h5committest jam w/ direct VFD (*very* slow!) NOTE: platypus cmake fails, but this is not a new error.
* [svn-r26272] Merge of r26071 from features/autotools_reworkDana Robinson2015-02-225-75/+6
| | | | | | | | | | | | Removes the --with-default-vfd option from configure. This was basically useless and only allowed selecting the stdio VFD. Since this is a demo VFD and not really a production VFD, we decided to retire this option. Fixes: HDFFV-9081 Tested on: h5committest NOTE: platypus cmake fails, but this is not a new error.
* [svn-r26271] Reverse merge of r26260 which was causing daily test failures.Dana Robinson2015-02-2212-364/+45
| | | | Tested on: jam w/ parallel and fortran
* [svn-r26260] - add an attribute callback to call H5_term_library when ↵Mohamad Chaarawi2015-02-2012-45/+364
| | | | | | | | | MPI_COMM_SELF is destroyed. - add tests for above. - this is a fix for HDFFV-883. tested h5committest
* [svn-r26259] Remove fileAllen Byrne2015-02-201-321/+0
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* [svn-r26256] Remove file - obsoleted by cmake 3.1 minimumAllen Byrne2015-02-201-1/+1
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* [svn-r26255] Remove file - obsoleted by cmake 3.1 minimumAllen Byrne2015-02-201-1/+0
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* [svn-r26254] Changed mpi test to use include 'mpif.h'Scot Breitenfeld2015-02-201-1/+1
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* [svn-r26253] Update CMake with fortran source properties and defines, ↵Allen Byrne2015-02-2010-172/+178
| | | | correct name of hl fortran examples option check
* [svn-r26249] Removed warnings about NO TRACE from bin/trace script.Dana Robinson2015-02-201-6/+5
| | | | | | Fixes: HDFFV-9098 Tested on: jam (bin/trace only - causes no source changes)
* [svn-r26247] Reverted back from using 'USE MPI' to include 'mpif.h' since ↵Scot Breitenfeld2015-02-204-4/+5
| | | | windows does not seem to support 'USE MPI'.
* [svn-r26246] Corrects a regular expression in the bin/trace Perl script that ↵Dana Robinson2015-02-208-3/+14
| | | | | | | | | | did not match API calls which return a pointer. Fixes: HDFFV-9141 Tested on: h5committest
* [svn-r26241] Fixed issue with default 8 byte integers using xlf compilers.Scot Breitenfeld2015-02-194-26/+31
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* [svn-r26236] Updated the MANIFEST file after deleting VMS support files.Dana Robinson2015-02-191-49/+0
| | | | Tested on: bin/chkmanifest
* [svn-r26234] Removed VMS support from the library. A tag ↵Dana Robinson2015-02-1943-4818/+0
| | | | (vms_last_support_trunk) was created just before the VMS files were deleted.
* [svn-r26233] Disable h5tenum_insert_f if F2003 is enabled.Scot Breitenfeld2015-02-191-1/+1
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* [svn-r26230] Add def file comment when it is F2003vms_last_support_trunkAllen Byrne2015-02-191-0/+2
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* [svn-r26225] Removes broken open() call work-around that was specific to the nowDana Robinson2015-02-196-30/+0
| | | | | | | | | | unsupported Code Warrior compiler. Also removes the H5_NO_SHARED_WRITING symbol from the pubconf file. Fixes: HDFFV-9080 Tested on: jam only, after bin/reconfigure (all platforms should see no source changes)
* [svn-r26223] add another H5close before finalize so with-mpe does not fail.Mohamad Chaarawi2015-02-181-1/+4
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* [svn-r26222] call H5close before MPI_Finalize() and close some objects that ↵Mohamad Chaarawi2015-02-181-1/+8
| | | | could be potentially left open.
* [svn-r26219] Merge r26029 from autotools_rework feature branch.Dana Robinson2015-02-182-0/+10
| | | | | | | | | Adds a comment to configure.ac indicating that Cygwin still has problems with srcdir and time. Fixes: HDFFV-9082 Tested on: jam (comment only change) w/ bin/reconfigure
* [svn-r26217] Added H5T_PROVISIONAL_mp_H5TENUM_INSERT_FScot Breitenfeld2015-02-181-1/+1
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* [svn-r26216] Removed inappropriate TEXT() macro from the plugin name and ↵Dana Robinson2015-02-181-9/+21
| | | | | | | | changed a few Win32 API calls to use the <function>A version, which forces char behavior (vs. wchar_t) when UNICODE is defined. This only affects Windows. Fixes HDFFV-8927 Tested on 64-bit Windows 7 with Visual Studio 2012 and CMake 3.2 with UNICODE/_UNICODE both defined and undefined.
* [svn-r26214] Fix for HDFFV-8908:Scot Breitenfeld2015-02-187-52/+210
| | | | h5tenum_insert_f does not work with default 8 byte integers (xlf compiler)
* [svn-r26213] Description:Quincey Koziol2015-02-183-88/+76
| | | | | | | | Minor code cleanups, to align with revise_chunks branch. Tested on: Mac OSX/64 10.10.2 (amazon) w/serial & parallel Linux/32 2.6.x (jam) w/serial
* [svn-r26211] revert ci 26204Scot Breitenfeld2015-02-187-218/+57
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* [svn-r26210] Removed debugging statement and typos.Scot Breitenfeld2015-02-182-5/+2
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* [svn-r26208] Update cmake minimumsAllen Byrne2015-02-1843-44/+44
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* [svn-r26206] Reverting change r26204Scot Breitenfeld2015-02-181-4/+0
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