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* [svn-r20218] Valgrind fix for memory leak in print_datatype which used an ↵Allen Byrne2011-03-091-1/+3
| | | | | | allocation function in a printf(). Tested: local linux and valgrind
* [svn-r20217] Valgrind indicated error in reading past end of buffer.Allen Byrne2011-03-091-1/+4
| | | | Tested: local linux and valgrind
* [svn-r20216] Valgrind fix for memory leak in h5tools_dump_xxx which is fixed ↵Allen Byrne2011-03-094-4/+90
| | | | | | | | by adding a new function; htri_t H5Tdetect_vlen_str(hid_t tid) to h5tools. This needs to be called before any H5Aread/H5Dread and if TRUE, then call vlen_reclaim function after the corresponding h5tools_dump_xxx(). Tested: local linux and valgrind
* [svn-r20211] Valgrind indicated error in writing past buffer. Contary to ref ↵Allen Byrne2011-03-091-1/+1
| | | | | | man H5O_get_comment does not return null char in size. Tested: local linux and valgrind
* [svn-r20209] add test case for -y -o for h5dumpPeter Cao2011-03-091-0/+6
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* [svn-r20208] Valgrind fix for memory leak in free_tables - 2nd malloc was ↵Allen Byrne2011-03-091-0/+4
| | | | | | freed by free_table calls but not the first malloc. Added HDfree('table') after each free_table() call. Tested: local linux and valgrind
* [svn-r20207] removed duplicate line.Peter Cao2011-03-091-1/+0
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* [svn-r20206] Updated manifest and source code for fixing h5dump -y -o problemPeter Cao2011-03-093-9/+13
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* [svn-r20205] Add tall-6.ddl from previous commit r20204.Jonathan Kim2011-03-081-0/+1
| | | | Test file for Bug 2183 - h5dump -y -o prints out attribute values
* [svn-r20204] Add test case for check -y -o optionsPeter Cao2011-03-081-0/+27
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* [svn-r20203] Purpose:Jonathan Kim2011-03-085-9/+60
| | | | | | | | | | | | | Fix Bug 2120 - h5copy: improve to copy an object into same HDF file Description: Before the fix users can't copy an object (dataset or group) with different name if input file (-i) and output file (-o) is same. This feature would be useful to clone any object with different name and reuse contents. Tested: jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Cmake (jam)
* [svn-r20202] Correct order of tests DEPENDSAllen Byrne2011-03-081-7/+3
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* [svn-r20201] Order fflush tests - fflush2 DEPENDS on fflush1Allen Byrne2011-03-081-0/+1
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* [svn-r20200] Add expected fail condition to memcheck alternate tests.Allen Byrne2011-03-082-0/+18
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* [svn-r20197] Change test macro to allow control of infile and outfile parametersAllen Byrne2011-03-081-4/+8
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* [svn-r20195] Description: Fixed memory leaks (valgrind detected) in ↵Scot Breitenfeld2011-03-072-5/+9
| | | | | | field_info and make tables routines. Tested: jam (gnu and intel compilers)
* [svn-r20192] Description: Bug 1939: h5tbget_field_info_fScot Breitenfeld2011-03-064-1173/+1203
| | | | | | | | | | | | | | | | | * Fixed error in passing an array of characters with different length field names for h5tbmake_table. * Fixed error in h5tget_field_info_f with packing the C strings into a fortran array of strings. * Added optional arguement to h5tbget_field_info_f called maxlen which returns the maximum string character length in a field name element. * Uncommented out test for h5tbget_field_info_f in the test program and added additional checks for the output. Tested: jam (intel and gnu compilers)
* [svn-r20188] Purpose:Jonathan Kim2011-03-042-2/+18
| | | | | | | | | | | | Fixing Bug 2161 - GMQS: h5dump - only on Windows, skip displaying a data value every a certain lines in array type dataset Description: Fixed h5dump for skipping some values for long array type dataset on Windows. This issue only occurred on Windows due to the different return behavior from _vsnprintf() funtion. Tested: Windows, jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE)
* [svn-r20186] Verify/cleanup code due to debugging changesAllen Byrne2011-03-043-9/+10
| | | | Tested: local linux
* [svn-r20184] Enable h5dump tests in valgrindAllen Byrne2011-03-042-195/+223
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* [svn-r20180] I added 2 public macros to the H5public.h - H5_VERSION_GE and ↵Raymond Lu2011-03-022-0/+60
| | | | | | H5_VERSION_LE - and put some test cases in tfile.c. Tested on jam, heiwa, and amani.
* [svn-r20172] Add h5mkgrp utility to package listAllen Byrne2011-03-011-1/+1
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* [svn-r20171] Add HDF5_USING_MEMCHECKER guards around script mode ADD_TEST. ↵Allen Byrne2011-03-019-222/+253
| | | | | | This will replace the list of ignore tests in CTestCustom.cmake file. Tested: local linux
* [svn-r20170] Correct name of tool from hdf2gif to h52gif.Allen Byrne2011-03-011-4/+4
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* [svn-r20168] BZ2048: Add -E --enable-error-stack option to h5dump.Allen Byrne2011-02-288-4/+122
| | | | Tested: local linux, heiwa, windows
* [svn-r20161] Correct test properties for test orderAllen Byrne2011-02-251-3/+7
| | | | Tested: local linux
* [svn-r20156] Update macros to correct errors found on windowsAllen Byrne2011-02-251-2/+10
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* [svn-r20155] Change macros - do not need URL parameterAllen Byrne2011-02-242-11/+11
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* [svn-r20154] Update error in szip ext project macroAllen Byrne2011-02-241-2/+2
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* [svn-r20153] Move ext lib handling for ext project building to a common ↵Allen Byrne2011-02-2429-345/+419
| | | | | | macro. Update HDF5 project to use HDFMacros.cmake file. Add test properties for test ordering. Tested: local linux, windows
* [svn-r20151] On windows the name of static zlib library is dependent on the ↵Allen Byrne2011-02-241-6/+6
| | | | use of HDF_LEGACY_NAMING value when built from SVN/TGZ source.
* [svn-r20149] Change Name of Legacy naming optionAllen Byrne2011-02-232-10/+10
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* [svn-r20145] Correct misplaced bracketAllen Byrne2011-02-221-2/+2
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* [svn-r20141] Bring 1.8 r20139 cmake and windows changes to trunkAllen Byrne2011-02-2244-539/+1339
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* [svn-r20135] Description:Quincey Koziol2011-02-223-3/+47
| | | | | | | | | | | | | | | | | | | | Bring r20134 from metadata journaling merging branch to trunk: Bring changes from metadata journaling branch to "merging" branch: Unify routine to mark a dataset's metadata as changed. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, w/threadsafe, in production mode Linux/PPC 2.6 (heiwa) w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in debug mode
* [svn-r20132] Purpose:Jonathan Kim2011-02-216-5/+1017
| | | | | | | | | | | | | | | | | Fixing Bug 2092 - h5dump does not display index for a dataset Description: improve the test case from previous checkin r20108, which also display dataset via region reference. Previous Log: h5dump skip displaying array indices every certain number when the array type dataset is relatively big. The certain number varies according to the size of each array. This checkin fix the skipping array indices problem. This fix also correct indentation of the dataset data output. Tested: jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Cmake - jam
* [svn-r20124] Bug fix (ID: 519)Albert Cheng2011-02-182-104/+0
| | | | | | | | The content of bin/config_para_ibm_sp.sh has been added to release_docs/INSTALL_parallel long ago. Just got around to remove it. Tested: no need since nothing refer to config_para_ibm_sp.sh except MANIFEST. Ran bin/chkmanifest.
* [svn-r20121] Bug 1586 - the datatype handler created with H5Tencode/decode ↵Raymond Lu2011-02-183-12/+80
| | | | | | had the reference count 0. I fixed it by changing the APP_REF parameter of H5I_register from FALSE to TRUE and added a test case in dtypes.c. Tested on jam, heiwa, and amani.
* [svn-r20119] Description:Quincey Koziol2011-02-175-280/+282
| | | | | | | | | | | | | | | | | | | | Clean up MPI resource leaks in parallel tests, along with a bunch of compiler warnings. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, w/threadsafe, in production mode Linux/PPC 2.6 (heiwa) w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in debug mode Mac OS X/32 10.6.6 (amazon) in debug mode Mac OS X/32 10.6.6 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r20116] Description:Frank Baker2011-02-171-1/+1
| | | | Update copyright dates to include 2011.
* [svn-r20113] Add note to RELEASE.txt about external file cache.Neil Fortner2011-02-171-0/+4
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* [svn-r20112] Merge open_file_pool branch into trunk.Neil Fortner2011-02-1717-91/+4872
|\ | | | | | | Tested: jam (branch tested with h5committest)
| * [svn-r20064] Purpose: Implement external file cacheNeil Fortner2011-02-0817-91/+4872
| | | | | | | | | | | | | | | | | | Description: Implements a cache of files opened through external links. Adds the public functions H5Pset_elink_file_cache_size(), H5Pget_elink_file_cache_size(), and H5Frelease_file_cache(). Tested: jam, amani, heiwa (h5committest), fedora 64.
| * [svn-r20063] Merge changes from trunk from revision 19519 to 20062 into ↵Neil Fortner2011-02-08284-7465/+23382
| |\ | | | | | | | | | open_file_pool branch. No testing needed as the branch is currently identical to the trunk.
* | | [svn-r20110] Ignore valgrind memleak test on cmake script for ↵Jonathan Kim2011-02-171-0/+2
| | | | | | | | | | | | H5LS-tgrp_comments and H5DUMP-tarray1_big test cases.
* | | [svn-r20108] Purpose:Jonathan Kim2011-02-1513-46/+2163
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Fixing Bug 2092 - h5dump does not display index for a dataset Description: h5dump skip displaying array indices every certain number when the array type dataset is relatively big. The certain number varies according to the size of each array. This checkin fix the skipping array indices problem. This fix also correct indentation of the dataset data output. Tested: jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE)
* | | [svn-r20103] Purpose:Jonathan Kim2011-02-147-87/+66
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Change to use HDxxx macros. Description: Originally this started for fixing incorrect pointer usage. But that got fixed through coverity merge. So this is mainly changing to use HDxxx macros and clean up some related code. Tested: jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE)
* | | [svn-r20095] Removed AIX 5.3 and Cray xt3, added AIX 6.1 as supported platforms.Albert Cheng2011-02-131-13/+8
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* | | [svn-r20089] Add note to known problems section of RELEASE.txt about ↵Neil Fortner2011-02-111-0/+2
| | | | | | | | | | | | | | | | | | run-all-ex.sh on Cygwin. Tested: kwrite
* | | [svn-r20076] Updated for the adding of mpicc/mpif90 as default parallel ↵Albert Cheng2011-02-091-0/+3
| | | | | | | | | | | | | | | | | | compiler commands for linux systems.