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* [svn-r1217] Changes since 19990426Robb Matzke1999-04-2611-104/+109
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./config/commence.in ./examples/Makefile.in ./test/Makefile.in ./testpar/Makefile.in ./tools/Makefile.in Fixed some dependency problems in Makefiles. If the library version is updated then everything gets recompiled. ./src/H5G.c ./src/H5R.c Failure return value for object type functions is now H5G_UNKNOWN as documented. ./src/H5Shyper.c ./src/H5Spoint.c Fixed an unused argument warning. ./tools/h5debug.c Fixed a call to H5F_block_read() since the 4th argument is different now. ./tools/h5ls.c Added a space between the object name and class to make the output readable when the object name is longer than 24 characters. C
* [svn-r1216] Changes since 19990423Robb Matzke1999-04-2620-151/+160
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./src/H5B.c ./src/H5D.c ./src/H5F.c ./src/H5Farray.c ./src/H5Fcore.c ./src/H5Ffamily.c ./src/H5Fistore.c ./src/H5Flow.c ./src/H5Fmpio.c ./src/H5Fprivate.h ./src/H5Fsec2.c ./src/H5Fsplit.c ./src/H5Fstdio.c ./src/H5Gnode.c ./src/H5HG.c ./src/H5HL.c ./src/H5O.c Changed H5F_block_read/write() to take a file transfer property list instead of just a parallel I/O mode. This will allow us to pass additional parameters to the I/O functions without having so many arguments to worry about. This fixes a bug I introduced last Friday for parallel HDF5 ./src/H5B.c Fixed decoding of B-tree keys when iterating through the leaves of the B-tree. This fixes a bug for applications that are adding new entries to groups and also listing the groups.
* [svn-r1215] SnapshotRobb Matzke1999-04-241-1/+1
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* [svn-r1214] Changed the third parameter of H5F_mpio_write and H5F_mpio_read backAlbert Cheng1999-04-241-12/+6
| | | | | | to "H5D_transfer_t xfer_mode". H5F_mpio_write/read are i/o driver calls as low as H5F_low_write. This class of functions are invoked with the xfer_mode argument.
* [svn-r1213] Added better error message for attemping to close a default ↵Quincey Koziol1999-04-231-3/+4
| | | | property list.
* [svn-r1212] Added "./" before h5toh4 in script.Quincey Koziol1999-04-231-1/+1
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* [svn-r1211] Took out linefeeds from hyperslab.c and changed a datatype in ↵Quincey Koziol1999-04-232-4/+3
| | | | | | tselect.c to make it more portable.
* [svn-r1210] Changed parameters for function calls which figure out the ↵Quincey Koziol1999-04-234-37/+56
| | | | | | | | | | | | | | | buffer size for H5Dread/H5Dwrite to use to allow the I/O calls to break up a user's buffer into pieces that are at least as large as the sequence of bytes being written in the fastest changing dimension. Also fixed a hard-to-find bug in the hyperslab I/O routines which could cause data to be corrupted when writing out fields to compound datatype data with background preservation turned on and hyperslabs which were large enough to require two I/O passes on a hyperslab block. A pretty obscure situation, but it would be worthwhile for users to upgrade to this code in order to be certain that correct data is being written.
* [svn-r1209] Handled another signal that the Cray T3E was generating on ↵Quincey Koziol1999-04-231-2/+29
| | | | | | invalid memory accesses.
* [svn-r1208] Changed the I/O loops for H5Dwrite/H5Dread to break up a user's ↵Quincey Koziol1999-04-231-30/+43
| | | | | | | buffer into pieces that are at least as long as the smallest sequence to write/read in the fastest changing dimension.
* [svn-r1207] Updated compile options for the Cray T3EQuincey Koziol1999-04-231-2/+2
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* [svn-r1206] RM_H5R.htmlFrank Baker1999-04-232-33/+20
| | | | | | | | | | | | | | Corrected parameter and return types in function prototypes and parameter descriptions Deleted comments regarding unimplemented functionality in R1.0 which has since been implemented Cleaned up formatting of commands TOC at top of page References.html Corrected parameter and return types in function prototypes and in example code Deleted comments regarding unimplemented functionality in R1.0 which has since been implemented
* [svn-r1205] changed the projects setting for the toolslib release version.Patrick Lu1999-04-231-0/+0
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* [svn-r1204] Changes since 19990415Robb Matzke1999-04-2328-213/+649
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./config/depend.in Fixed automatic dependencies. We were storing dependencies for *.o files instead of *.lo files after shared libraries were added. ./config/gnu-flags ./config/linux-gnulibc1 Moved `-march=pentiumpro -mcpu=pentiumpro -malign-double' from the linux file to this file and caused it to depend on the CPU name. This fixes one of Elena's bugs. ./src/H5B.c ./src/H5Bprivate.h ./src/H5D.c ./src/H5Dprivate.h ./src/H5Dpublic.h ./src/H5F.c ./src/H5Farray.c ./src/H5Fistore.c ./src/H5Fmpio.c ./src/H5Fprivate.h ./src/H5Fpublic.h ./src/H5Gnode.c ./src/H5P.c ./src/H5RA.c ./src/H5Sall.c ./src/H5Shyper.c ./src/H5Smpio.c ./src/H5Spoint.c ./src/H5Sprivate.h ./src/H5Tpublic.h ./test/istore.c Added an H5Dget_storage_size() function that reports the amount of storage allocated for raw data in a dataset. Changed H5D_xfer_* to H5F_xfer_* because these properties are more general than datasets. This also allows some of the lower-level I/O functions to get this information easier. ./src/H5S.c ./src/H5Sall.c Added two new functions H5S_all_read() and H5S_all_write() which are optimizations that copy data directly between file and memory without having to go through the scatter gather step. This knocks quite a bit of time off the I/O and reading/writing entire datasets is a fairly common operation. ./tools/h5ls.c Reports the logical size of data, the allocated size of data, and the percent utilization. ./MANIFEST Removed old pablo files, added new files. Snapshots should now start to work again. ./src/H5D.c ./src/H5Fmpio.c Removed two warnings signed vs. unsigned comparisons and check for overflow.
* [svn-r1203] SnapshotRobb Matzke1999-04-231-1/+1
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* [svn-r1202] SnapshotRobb Matzke1999-04-221-1/+1
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* [svn-r1201] created the tools library project for NT and included them into ↵Patrick Lu1999-04-211-0/+0
| | | | | | all the tools projects as dependents.
* [svn-r1200] SnapshotRobb Matzke1999-04-211-1/+1
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* [svn-r1199] Corrected a problem with file mappings.Dan Wells1999-04-201-4/+5
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* [svn-r1198] SnapshotRobb Matzke1999-04-201-1/+1
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* [svn-r1197] correcting a problem that causes a compile error on SPDan Wells1999-04-191-1/+1
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* [svn-r1196] removed some extra files that did not belong in the zip file.Patrick Lu1999-04-191-0/+0
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* [svn-r1195] SnapshotRobb Matzke1999-04-191-1/+1
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* [svn-r1194] SnapshotRobb Matzke1999-04-181-1/+1
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* [svn-r1193] SnapshotRobb Matzke1999-04-171-1/+1
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* [svn-r1192] DDL.htmlFrank Baker1999-04-161-208/+0
| | | | Removing extraneous file; correct file is ddl.html.
* [svn-r1191] moved some code around to fix a crash.Patrick Lu1999-04-161-2/+18
| | | | code is surounded by #ifdef WIN32
* [svn-r1190] moved some of the code around to fix a crash in the dll version ↵Patrick Lu1999-04-161-0/+15
| | | | | | of the test. All changes were surrounded #ifdef _HDF5USEDLL
* [svn-r1189] updated the H5Tinit.cPatrick Lu1999-04-161-0/+0
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* [svn-r1188] Attributes.htmlFrank Baker1999-04-161-8/+8
| | | | Minor copy edits.
* [svn-r1187] H5.intro.htmlFrank Baker1999-04-161-2/+9
| | | | Clarification in discussion of datatypes.
* [svn-r1186] SnapshotRobb Matzke1999-04-161-1/+1
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* [svn-r1185] Using same file for HDF 4 and HDF 5.Dan Wells1999-04-151-0/+1745
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* [svn-r1184] Changes since 19990402Robb Matzke1999-04-1558-486/+508
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./config/commence.in ./config/conclude.in ./test/Makefile.in ./tools/Makefile.in Fixed so private libraries are not installed publicly. The installation directories `bin', `include', and `lib' are created mode 755. ./src/H5.c ./src/H5A.c ./src/H5F.c ./src/H5Fcore.c ./src/H5Fistore.c ./src/H5Flow.c ./src/H5Fmpio.c ./src/H5Fsec2.c ./src/H5Fstdio.c ./src/H5G.c ./src/H5Gent.c ./src/H5Gnode.c ./src/H5HG.c ./src/H5HL.c ./src/H5O.c ./src/H5Oattr.c ./src/H5Ocomp.c ./src/H5Ocont.c ./src/H5Odtype.c ./src/H5Oefl.c ./src/H5Ofill.c ./src/H5Olayout.c ./src/H5Omtime.c ./src/H5Oname.c ./src/H5Osdspace.c ./src/H5Oshared.c ./src/H5Ostab.c ./src/H5R.c ./src/H5Sall.c ./src/H5Shyper.c ./src/H5Smpio.c ./src/H5Snone.c ./src/H5Spoint.c ./src/H5T.c ./src/H5Tconv.c ./src/H5Vprivate.h ./src/H5Z.c ./src/H5detect.c ./src/H5private.h ./test/chunk.c ./test/dsets.c ./test/dtypes.c ./test/h5test.c ./test/overhead.c ./test/ragged.c ./test/tattr.c ./tools/h5dump.c ./tools/h5findshd.c ./tools/h5ls.c Changed `__unused__' to `UNUSED' to fix a conflict with GNU header files. ./src/H5Tpkg.h ./test/h5test.h Removed __unused__ from forward function declarations. ./src/H5P.c Removed a comment about restrictions for the type conversion temporary buffers. Thanks to Quincey, the comment no longer applied. ./src/H5T.c Relaxed the H5Tpack() a little so it would pack compound data structures that had non-transient atomic members. ./tools/h5ls.c Added a `-g' (or `--group') flag that causes information to be printed about the specified group instead of the group's contents. (sort of like Unix's `ls -d'). The `-g' can be used in combination with `-r' to print information about the group and its contents.
* [svn-r1183] SnapshotRobb Matzke1999-04-151-1/+1
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* [svn-r1182] Changed name of PABLO Mask to simplify automatic definitions.Dan Wells1999-04-1418-18/+18
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* [svn-r1181] Changes to allow automatic building of tables for event IDs and ↵Dan Wells1999-04-147-2033/+1796
| | | | for compatiblity of HDF 4 and HDF 5 trace files.
* [svn-r1180] Changes to allow automatic building of tables of event IDs and ↵Dan Wells1999-04-144-811/+312
| | | | to make HDF 4 and HDF 5 output compatible.
* [svn-r1179] Changes made to enable automatic building of list of event IDs ↵Dan Wells1999-04-143-176/+558
| | | | and to make output of HDF 4 and HDF 5 tracing compatible.
* [svn-r1178] SnapshotRobb Matzke1999-04-092-2/+2
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* [svn-r1177] Changed HDmalloc to malloc to avoid the need of using H5private.h.Albert Cheng1999-04-082-6/+3
| | | | | Removed the #ifndef MPIOTEST. MPIO tests should run all the time now that the test is more efficient.
* [svn-r1176] Removed the -L./ and -L../ which are meaningless.Albert Cheng1999-04-081-1/+1
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* [svn-r1175] Added the recognition of the tflops (Intel Red) platform.Albert Cheng1999-04-081-0/+4
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* [svn-r1174] INSTALL_parallel.ascired:Albert Cheng1999-04-082-3/+25
| | | | | | | | | Changed to use the mpio version by Daniel Sands. Added --disable-shared to ask for a non-shared version. configure: $AR was not passed to the creation of libtool. tflops uses xar instead of the generic ar.
* [svn-r1173] SnapshotRobb Matzke1999-04-032-2/+2
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* [svn-r1172] Purpose:Paul Harten1999-04-0214-79/+194
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | New feature Problem: The h5toh4 converter tester - testh5toh4, is set up to place output files in same directory as input files. A difficulty comes up when the input files come off a write-protected media, such-as CDROM. Solution: Rather than using "cd" to change directory and referencing files by short filename only, "input directory" and "output directory" are defined explicitly, and files are always referenced with pathnames included. For cases when the converter generates the output filename, a copy of the input file is first placed in the "output directory". The copied input file is used by h5toh4 and then removed. On Solaris2.5, the following sequence of commands seemed to work fine: $ gunzip < hdf5-1.1.72.tar.gz | tar xf - $ chmod -R ugo-w hdf5-1.1.72 $ mkdir build $ cd build $ ../hdf5-1.1.72/configure --enable-production --disable-debug \ $ --with-hdf4=... --with-zlib=... $ make check This change should allow the tester to be used when the hdf5 source is on a read only media like a CDROM. Platform tested: Solaris2.5
* [svn-r1171] Changes since 19990330Robb Matzke1999-04-024-20/+24
| | | | | | | | | | | | | | | | | | | ---------------------- ./src/H5A.c ./src/H5D.c The `bkg' buffers are zeroed before calling the type conversion function. This fixes a problem where reading a file compound data structure into memory results in garbage between the members. ./src/H5I.c Fixed H5I_clear_group() so it removes entries even when a free callback is not registered. This fixes fixes an `infinite loop closing library' warning message. ./src/H5.c Added ellipses to the end of the infinite loop message.
* [svn-r1170] SnapshotRobb Matzke1999-03-312-2/+2
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* [svn-r1169] ./configure.inRobb Matzke1999-03-3024-481/+650
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ./configure [REGENERATED] ./src/H5D.c ./src/H5O.c Removed H5AC, H5B, and H5T from the default list of packages to debug (because they're pretty expensive debugging), and added H5O. Also fixed a bug for undefined variable in H5D when H5S debugging is turned on but H5T debugging is turned off. ./config/conclude.in Fixed installation of header files for building in a directory other than the source directory. This fixes a bug where H5config.h wasn't being installed. ./src/H5.c ./src/H5A.c ./src/H5D.c ./src/H5F.c ./src/H5G.c ./src/H5I.c ./src/H5Iprivate.h ./src/H5P.c ./src/H5R.c ./src/H5RA.c ./src/H5S.c ./src/H5T.c ./src/H5TB.c ./src/H5Tprivate.h ./src/H5Z.c ./src/H5detect.c ./src/H5private.h Changed the way the library shuts down again. Now it handles cycles between packages and isn't so sensitive to dependencies between packages. A package might shut down only to be restarted to process a request from some other package being shut down. Loops are detected after 100 iteractions and the shutdown is aborted with a message on standard error. This also makes it a lot easier to debug. ./src/H5A.c Fixed H5A_write() and H5A_read() so they pass a non-null background buffer to the conversion functions. This is necessary when an attribute has a compound data type. ./src/H5Flow.c ./src/H5Fprivate.h ./src/H5Fsec2.c Reindented new Win32 stuff. ./src/H5Odtype.c Fixed a bug when enumeration types are used in a compound data type. The byte pointer wasn't incremented after the type information was written. ./tools/h5ls.c Compound data types display their total size because it's not always obvious from looking at the members. Scalar attributes show their space as `scalar' instead of `{}'. The index value is not printed for attributes that have only a few values. Instead the word `Data:' is printed on the first line of attribute data. Named types display their data type only if verbose output was requested.
* [svn-r1168] /configure.inRobb Matzke1999-03-302-3/+3
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ./configure [REGENERATED] ./src/H5D.c ./src/H5O.c Removed H5AC, H5B, and H5T from the default list of packages to debug (because they're pretty expensive debugging), and added H5O. Also fixed a bug for undefined variable in H5D when H5S debugging is turned on but H5T debugging is turned off. ./config/conclude.in Fixed installation of header files for building in a directory other than the source directory. This fixes a bug where H5config.h wasn't being installed. ./src/H5.c ./src/H5A.c ./src/H5D.c ./src/H5F.c ./src/H5G.c ./src/H5I.c ./src/H5Iprivate.h ./src/H5P.c ./src/H5R.c ./src/H5RA.c ./src/H5S.c ./src/H5T.c ./src/H5TB.c ./src/H5Tprivate.h ./src/H5Z.c ./src/H5detect.c ./src/H5private.h Changed the way the library shuts down again. Now it handles cycles between packages and isn't so sensitive to dependencies between packages. A package might shut down only to be restarted to process a request from some other package being shut down. Loops are detected after 100 iteractions and the shutdown is aborted with a message on standard error. This also makes it a lot easier to debug. ./src/H5A.c Fixed H5A_write() and H5A_read() so they pass a non-null background buffer to the conversion functions. This is necessary when an attribute has a compound data type. ./src/H5Flow.c ./src/H5Fprivate.h ./src/H5Fsec2.c Reindented new Win32 stuff. ./src/H5Odtype.c Fixed a bug when enumeration types are used in a compound data type. The byte pointer wasn't incremented after the type information was written. ./tools/h5ls.c Compound data types display their total size because it's not always obvious from looking at the members. Scalar attributes show their space as `scalar' instead of `{}'. The index value is not printed for attributes that have only a few values. Instead the word `Data:' is printed on the first line of attribute data. Named types display their data type only if verbose output was requested.
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