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* Merge pull request #1431 in HDFFV/hdf5 from ↵Binh-Minh Ribler2019-01-053-11/+50
|\ | | | | | | | | | | | | | | ~BMRIBLER/hdf5_1_10_bmr:hdf5_1_10 to hdf5_1_10 * commit '82dd54c26b11245c36f65a044e9b717dc2c337e0': Revised text Fixed CVE division-by-zero issues Description: Fixed HDFFV-10577 and similar issues found in H5Dchunk.c. All the occurrences are in: H5D__create_chunk_map_single H5D__create_chunk_file_map_hyper H5D__chunk_allocate H5D__chunk_update_old_edge_chunks H5D__chunk_prune_by_extent H5D__chunk_copy_cb H5D__chunk_collective_fill Also updated RELEASE.txt for the chunk query functions and removed some blank lines in chunk_info.c. Platforms tested: Linux/64 (jelly) Linux/64 (platypus) Darwin (osx1010test)
| * Revised textBinh-Minh Ribler2019-01-041-3/+4
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| * Merge branch 'hdf5_1_10' of ↵Binh-Minh Ribler2019-01-04215-7083/+8870
| |\ | | | | | | | | | https://bitbucket.hdfgroup.org/scm/~bmribler/hdf5_1_10_bmr into hdf5_1_10
| * | Fixed CVE division-by-zero issuesBinh-Minh Ribler2019-01-043-11/+49
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: Fixed HDFFV-10577 and similar issues found in H5Dchunk.c. All the occurrences are in: H5D__create_chunk_map_single H5D__create_chunk_file_map_hyper H5D__chunk_allocate H5D__chunk_update_old_edge_chunks H5D__chunk_prune_by_extent H5D__chunk_copy_cb H5D__chunk_collective_fill Also updated RELEASE.txt for the chunk query functions and removed some blank lines in chunk_info.c. Platforms tested: Linux/64 (jelly) Linux/64 (platypus) Darwin (osx1010test)
* | | Merge pull request #1432 in HDFFV/hdf5 from ↵jake.smith2019-01-051-0/+25
|\ \ \ | |_|/ |/| | | | | | | | | | | | | | | | | ~JAKE.SMITH/hdf5:dset_ohdr_minimize_110 to hdf5_1_10 * commit '150b73bb1af971dfff45d5f232b979622078d5bd': Tweak minimized datset header release info. Add dataset header minimization release info.
| * | Tweak minimized datset header release info.Jacob Smith2019-01-041-6/+20
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| * | Add dataset header minimization release info.Jacob Smith2019-01-041-0/+11
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* | | Merge pull request #1419 in HDFFV/hdf5 from ↵jake.smith2019-01-0422-1475/+3188
|\ \ \ | |/ / | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ~JAKE.SMITH/hdf5:dset_ohdr_minimize_110 to hdf5_1_10 Minimized dataset object headers * commit 'e1d865a11d7864f4c0733aa22a8c96f0f015ef75': Remove "bad" statements from end of TEST_ERROR. Formerly arguments to FAIL_PUTS_ERROR. Add semicolon at end of TEST_ERROR() invocation for consistency. Change FAIL_PUTS_ERROR to TEST_ERROR. Remove VOL-related merge cruft. Change H5Dcreate() to H5Dcreate2(). Fix return value (int -> void). Change H5Acreate to H5Acreate2 Remove unnecessary s Incoporate minimized dataset headers code and tests.
| * | Remove "bad" statements from end of TEST_ERROR.Jacob Smith2019-01-041-18/+18
| | | | | | | | | | | | Formerly arguments to FAIL_PUTS_ERROR.
| * | Add semicolon at end of TEST_ERROR() invocation for consistency.Jacob Smith2019-01-041-1/+1
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| * | Merge branch 'hdf5_1_10' of ↵Jacob Smith2019-01-0410-201/+1386
| |\ \ | |/ / |/| | | | | https://bitbucket.hdfgroup.org/scm/~jake.smith/hdf5 into dset_ohdr_minimize_110
* | | Merge pull request #1380 in HDFFV/hdf5 from ↵Binh-Minh Ribler2019-01-027-197/+1384
|\ \ \ | | |/ | |/| | | | | | | | | | | | | | | | | | | | | | ~BMRIBLER/hdf5_1_10_bmr:hdf5_1_10 to hdf5_1_10 This is merged now so it can be tested. * commit '74a3710a996fca5ed7fcb4dd8919a7a8521de1de': Revised per review. Description: Changed H5EA_iterate and H5FA_iterate as suggested. Platforms tested: Linux/64 (jelly) Linux/64 (platypus) Darwin (osx1010test) Addressed HDFFV-10661 Description: - Fixed a bug triggered by tests in chunk_info.c. The returned value from a callback function was not checked in H5EA_iterate(), H5FA_iterate(), and H5D__none_idx_iterate(). This oversight caused a callback function to continue iterating even though it's supposed to stop. Vailin confirmed. - Addressed review comments and made various improvements on the tests. Platforms tested: Linux/64 (jelly) Linux/64 (platypus) Darwin (osx1010test)
| * | Revised per review.Binh-Minh Ribler2018-12-262-12/+22
| | | | | | | | | | | | | | | | | | | | | | | | | | | Description: Changed H5EA_iterate and H5FA_iterate as suggested. Platforms tested: Linux/64 (jelly) Linux/64 (platypus) Darwin (osx1010test)
| * | Addressed HDFFV-10661Binh-Minh Ribler2018-12-157-197/+1374
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: - Fixed a bug triggered by tests in chunk_info.c. The returned value from a callback function was not checked in H5EA_iterate(), H5FA_iterate(), and H5D__none_idx_iterate(). This oversight caused a callback function to continue iterating even though it's supposed to stop. Vailin confirmed. - Addressed review comments and made various improvements on the tests. Platforms tested: Linux/64 (jelly) Linux/64 (platypus) Darwin (osx1010test)
* | | Merge pull request #1424 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_10 to ↵Allen Byrne2019-01-021-2/+0
|\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit '277757fe9f0e68decba8035c22df260c8ee9f147': Remove files that do not exist in branch
| * | | Remove files that do not exist in branchAllen Byrne2019-01-021-2/+0
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* | | Merge pull request #1418 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_10 to ↵Larry Knox2018-12-312-2/+2
|\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit 'e46a974f78325b3a5d235fa51dd3ee61ec9c2f55': Actual stack count updated
| * | | Actual stack count updatedAllen Byrne2018-12-312-2/+2
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| | * Change FAIL_PUTS_ERROR to TEST_ERROR.Jacob Smith2019-01-042-25/+17
| | | | | | | | | | | | Remove VOL-related merge cruft.
| | * Change H5Dcreate() to H5Dcreate2().Jacob Smith2019-01-032-20/+20
| | | | | | | | | | | | Fix return value (int -> void).
| | * Change H5Acreate to H5Acreate2Jacob Smith2019-01-021-1/+1
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| | * Remove unnecessary sJacob Smith2019-01-022-6/+0
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| | * Merge branch 'hdf5_1_10' of ↵Jacob Smith2018-12-3177-4727/+4142
| | |\ | |_|/ |/| | | | | https://bitbucket.hdfgroup.org/scm/~jake.smith/hdf5 into dset_ohdr_minimize_105
* | | Merge pull request #1417 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_10 to ↵Allen Byrne2018-12-313-7/+10
|\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit 'a8437787596fb8f6ff61427e76122bc4c996009c': HDFFV-10669 merge from develop
| * | | HDFFV-10669 merge from developAllen Byrne2018-12-313-7/+10
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* | | Merge pull request #1415 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:hdf5_1_10 to ↵Dana Robinson2018-12-3174-4720/+4132
|\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit '029491e877a3c5c4f5947df3cc74785ce01be2ba': Merge of logging framework updates. Updated the H5I debug function so it's more robust and always available. Removed 'VOL' from some H5PL comments. Removed 'VOL' versions of FUNC_ENTER macros as well as empty functions orginally intended to support the full SWMR feature (from develop). Replaced all MPI-1 calls with MPI-2 equivalents (from develop).
| * | | Merge of logging framework updates.Dana Robinson2018-12-3126-2509/+3640
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| * | | Updated the H5I debug function so it's more robust and alwaysDana Robinson2018-12-312-35/+35
| | | | | | | | | | | | | | | | available.
| * | | Removed 'VOL' from some H5PL comments.Dana Robinson2018-12-312-5/+4
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| * | | Removed 'VOL' versions of FUNC_ENTER macros as well as empty functionsDana Robinson2018-12-3143-2156/+418
| | | | | | | | | | | | | | | | orginally intended to support the full SWMR feature (from develop).
| * | | Replaced all MPI-1 calls with MPI-2 equivalents (from develop).Dana Robinson2018-12-314-15/+35
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| | * Incoporate minimized dataset headers code and tests.Jacob Smith2018-12-3122-1474/+3201
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* | Merge pull request #1404 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_10 to ↵Allen Byrne2018-12-2111-194/+284
|\ \ | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit '269224c73d19a12336dc0dd12e787c359dec5665': Merge CMake changes from develop
| * | Merge CMake changes from developAllen Byrne2018-12-2011-194/+284
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* | Merge pull request #1376 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_10 to ↵Allen Byrne2018-12-16117-690/+1261
|\ \ | |/ |/| | | | | | | | | | | | | | | | | hdf5_1_10 * commit 'e2349130608e013e610a750b28fb00fc92866e0c': Add H5I_INVALID_HID Manifest fix Tools cleanup HDFFV-10660,-10594 merge from develop HDFFV-10632 separate stderr and stdout in tests
| * Add H5I_INVALID_HIDAllen Byrne2018-12-151-1/+1
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| * Manifest fixAllen Byrne2018-12-141-0/+2
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| * Tools cleanupAllen Byrne2018-12-1310-122/+80
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| * HDFFV-10660,-10594 merge from developAllen Byrne2018-12-1314-13/+248
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| * Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_10)Allen Byrne2018-12-130-0/+0
| |\ | |/ |/| | | * commit '1cffc3ff0f3454fedf6edcdb93dcde5ed1b910d6':
* | Merge pull request #1373 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_10 to ↵Allen Byrne2018-12-136-281/+1450
|\ \ | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit '88e514a6e51d0e3fedd855f7b2fbff74f1b5c802': HDFVIEW-4 add H5A read/write functions to match H5D
| | * HDFFV-10632 separate stderr and stdout in testsAllen Byrne2018-12-13103-565/+941
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| * HDFVIEW-4 add H5A read/write functions to match H5DAllen Byrne2018-12-136-281/+1450
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* Merge pull request #1359 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:hdf5_1_10 to ↵Dana Robinson2018-12-0719-352/+148
|\ | | | | | | | | | | | | hdf5_1_10 * commit '21e73fd58d64fdba5e06e73e59be30d2a4c3fd59': Moved fixes for incorrectly installed header files to 1.10.
| * Moved fixes for incorrectly installed header files to 1.10.Dana Robinson2018-12-0619-352/+148
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* | Merge pull request #1361 in HDFFV/hdf5 from ↵Binh-Minh Ribler2018-12-073-28/+13
|\ \ | |/ |/| | | | | | | | | ~BMRIBLER/hdf5_1_10_bmr:hdf5_1_10 to hdf5_1_10 * commit '1f96bda4b77efb53c4eddb5414d50e51cdc44390': Fixed typos. Platforms tested: Linux/64 (jelly)
| * Fixed typos.Binh-Minh Ribler2018-12-073-28/+13
|/ | | | | Platforms tested: Linux/64 (jelly)
* Merge pull request #1354 in HDFFV/hdf5 from ~JHENDERSON/hdf5:hdf5_1_10 to ↵Jordan Henderson2018-12-052-0/+12
|\ | | | | | | | | | | | | hdf5_1_10 * commit '8255e0f81b65cc75b4cfa12c2f77b370006abe50': Fix for HDFFV-10629
| * Fix for HDFFV-10629Jordan Henderson2018-12-052-0/+12
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* Merge pull request #1352 in HDFFV/hdf5 from ~BRTNFLD/hdf5_msb:hdf5_1_10 to ↵Scot Breitenfeld2018-12-051-0/+9
|\ | | | | | | | | | | | | hdf5_1_10 * commit '63ba86519b41558d46dd9faf919d12b6c279afac': updated with HDFFV-10511
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