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* [svn-r2767] ./hdf5/tools/h5tools.cRobb Matzke2000-10-311-17/+29
| | | | | | | | | | | | * 2000-10-31 Robb Matzke <matzke@llnl.gov> (h5dump_sprint) The whitespace added for indentation after the line-feed kludge is performed only if a line-feed was actually inserted. This fixes funny-looking h5ls output that had ` %s' sequences appearing in nested compound datatypes. Also added a prominent warning in the code to indicate that when a line-feed is inserted into the string that column number calculations will be incorrect and object indices will be missing.
* [svn-r2766] ./hdf5/src/H5T.cRobb Matzke2000-10-311-1/+1
| | | | Updated API tracing calls
* [svn-r2765] ./hdf5/src/H5S.cRobb Matzke2000-10-311-1/+1
| | | | Updated API tracing calls.
* [svn-r2764] ./hdf5/src/H5FD.cRobb Matzke2000-10-311-1/+1
| | | | Updated API tracing calls.
* [svn-r2763] ./hdf5/src/H5F.cRobb Matzke2000-10-311-2/+8
| | | | | | | * 2000-10-31 Robb Matzke <matzke@llnl.gov> (H5F_dest) Do not call H5FL_FREE() if the root group object is null. This fixes a bug in h5ls when that tool is given a file which is not an hdf5 file.
* [svn-r2762] ./hdf5/MANIFESTRobb Matzke2000-10-311-0/+17
| | | | | * 2000-10-31 Robb Matzke <matzke@llnl.gov> Added files for expected h5ls output.
* [svn-r2761] Purpose:Frank Baker2000-10-311-17/+16
| | | | | | TechNotes/VFLfunc.html: Minor reformatting for ease of reference Platforms tested: IE5
* [svn-r2760] Frank Baker2000-10-311-621/+27
| | | | | | | | | | | Purpose: Removing functions that have been removed from library. Solution: Removed H5Pget_driver, H5P[gs]et_stdio, H5P[gs]et_sec2, H5P[gs]et_core, H5P[gs]et_split, H5P[gs]et_family, H5P[gs]et_mpi, and H5P[gs]et_xfer. Platforms tested: IE5
* [svn-r2759] Description:Albert Cheng2000-10-311-1/+8
| | | | | | Added the entry of the Thread Safe library implement doc. Platforms tested: MS-IE on an NT.
* [svn-r2758] Purpose:Albert Cheng2000-10-311-1/+2
| | | | | | Updated Platforms tested: via bin/chkmanifest on arabica.
* [svn-r2757] Added the entry for the document of "using HDF5 with OpenMP".Albert Cheng2000-10-311-0/+5
| | | | | Platforms tested: MS-IE via windows.
* [svn-r2756] Purpose:Albert Cheng2000-10-311-1/+8
| | | | | | | | | | | | | | | | "New" document Description: Raymond has prepared and added a new document reporting his experience of using HDF5 with OpenMP. It was checked in as a .txt file but browsers could not display it properly, at least not for the MS-IE. Solution: I renamed the file from openmp-test.txt to openmp-hdf5.html, added in simple mind html control statement (<pre>), added an entry to the TechNote.html so that it can be found with other technical notes. Platforms tested: Viewed by MS-IE.
* [svn-r2755] Elena Pourmal2000-10-311-0/+5
| | | | | | | | | | | Purpose: Maintenance Description: I created ./fortran/testpar directory and added files to it but forgot to update MANIFEST file. Solution: Fixed MANIFEST. Platforms tested:
* [svn-r2754] Elena Pourmal2000-10-301-18/+29
| | | | | | | | | | | | Purpose: Bug fix. Description: Reading from the file failed because property list identifier was not properly passed to the subroutine h5dread_f. Solution: Fixed the order of the parameters in the h5dread_d call Platforms tested: O2K (modi4)
* [svn-r2753] Elena Pourmal2000-10-304-0/+300
| | | | | | | | | | | | | | Purpose: Adding F90 || tests. Description: I created testpar directory with the following files ptesthdf5_fortran.f90 - F90 test driver program tcheck.f90 thdf5.f90 - handy subroutines to use with the tests thyperslab_wr.f90 - F90 test: collectively writes and reads hyperslabs to/from the dataset Solution: Platforms tested: Partially tested on modi4 (O2K)
* [svn-r2752] Purpose:Albert Cheng2000-10-301-1/+1
| | | | | | | | | | | Bug fix Description: There is typo in the H5D_write function which reported the optimized write failure as a H5E_READERROR. Solution: Replaced it with the correct H5E_WRITEERROR code. Platforms tested: modi4 parallel (compiled H5D.o only).
* [svn-r2750] Thomas Radke2000-10-281-7/+22
| | | | | | | | | | | | | | | | | | | | | Purpose: Port to Windows. Description: The stream_test program now also compiles and can be run under Windows. Solution: The problem was that fork(2) and waitpid(2) aren't available under Windows when using the MS compilers. So I test for both H5_HAVE_FORK and H5_HAVE_WAITPID. These are already checked fortunately during configuration. If they are not there the code just says printf ("Test skipped because this architecture doesn't provide " "fork(2) and waitpid(2)\n"); Platforms tested: Windows NT, both with MS Visual C++ and GNU cc Now you can build and run the Stream VFD testsuite under Windows when using GNU cc !!
* [svn-r2749] Thomas Radke2000-10-281-1/+1
| | | | | | | | | | | | Purpose: Set compiler flag to force BSD compliance. Description: In order to set a socket descriptor into non-blocking mode via ioctl(2) the Stream driver uses the FIONBIO constant. Under Solaris this is defined only when compiled as BSD code. I hope this doesn't break anything. Platforms tested: Solaris 5.7
* [svn-r2748] Thomas Radke2000-10-281-0/+3
| | | | | | | | | | | | | Purpose: Detect whether the system has the netinet/tcp.h header file. Description: The Stream VFD uses setsockopt(2) to set TCP_NODELAY on an opened socket. This constant is defined normally in netinet/tcp.h except for GNU cc under Windows where this header doesn't exist. This template header file just contains the #undef HAVE_NETINET_TCP_H Platforms tested: Windows NT, GNU cc
* [svn-r2747] Thomas Radke2000-10-282-122/+163
| | | | | | | | | | | Purpose: Detect whether the system has the netinet/tcp.h header file. Description: The Stream VFD uses setsockopt(2) to set TCP_NODELAY on an opened socket. This constant is defined normally in netinet/tcp.h except for GNU cc under Windows where this header doesn't exist. Platforms tested: Windows NT, GNU cc
* [svn-r2746] Thomas Radke2000-10-282-92/+257
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Purpose: Port to Windows platform Bug fix Description: The Stream VFD is ported to Windows now. Also fixed a bug where an application terminated when it got a SIGPIPE due to sending/receiving on a closed socket. Solution: The socket stuff is treated different under Windows when using the MS compilers to build HDF5. They define their own socket datatype and have closesocket() instead of close(2) to close sockets. Also there are different header files for all the socket stuff. So I introduced my own socket decriptor datatype in H5FDstream.h which should be used to pass in external sockets. This datatype is mapped to either 'int' (UNIX-type sockets) or 'SOCKET' (Windows). In the code the error code checking was adapted according to the socket datatype used. Also, for Windows you have to call a routine to initialize the Socket layer before using it. As a kind of bug fix, the process signal mask is now set to ignore SIGPIPE signals which otherwise cause the application to terminate. The driver read/write routines catch this and return an error code. Platforms tested: Windows NT, both with MS Visual C++ compiler and with GNU cc It is interesting that when compiling with GNU cc under Windows it is possible to use both Windows and UNIX-type sockets (either one or the other). So I check for GNU cc and go for UNIX sockets if possible.
* [svn-r2745] Purpose:Bill Wendling2000-10-272-1/+3
| | | | | | | | | | | Bug fix...I hope Description: For some reason, libtool wasn't generating a .lai library file in the .libs directory. It needs this to install things, apparently. Solution: Major hack! I force a ln to the "real" one libtools wants. Platforms tested: Modi4
* [svn-r2744] Purpose:Quincey Koziol2000-10-271-0/+6
| | | | | | | | | | | | Bug fix Description: Forgot to decrement the number of objects in the group when removing each one... Solution: Decrement the ID count when successfully removing each object from a group. Platforms tested: None yet.
* [svn-r2743] Purpose:Quincey Koziol2000-10-271-37/+49
| | | | | | | | | | | | | | Bug fix Description: Fixed a very subtle bug that was corrupting the objects in a group when H5I_clear_group was called and not all the objects in the group were able to be cleared. Solution: Track whether an object as been deleted from each hash location's linked list and only destroy the list when all the objects on the list are actually removed. Platforms tested: None yet.
* [svn-r2742] Forgot some < and >'s.Bill Wendling2000-10-271-1/+1
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* [svn-r2741] Purpose:Bill Wendling2000-10-271-0/+1
| | | | Added ThreadSafe.html document to MANIFEST.
* [svn-r2740] Purpose:Bill Wendling2000-10-271-0/+794
| | | | | | | | | | Documentation of TS Library Description: This is the document Chee Wai wrote up about the thread safe version of the HDF5 library. I just put it in HTML format and checked it in... Platforms tested: Netscrape
* [svn-r2739] Elena Pourmal2000-10-265-79/+67
| | | | | | | | | | | | | Purpose: Maintenancece. Description: F90 APIs would not compile anymore for || version.. Solution: Replaced old functions h5pset(get)_mpio, h5set(get)_xfer with ones h5pset(get)_fapl_m and h5pset(get)_dxpl_mpio_f Platforms tested: O2K.
* [svn-r2738] Purpose:Bill Wendling2000-10-251-5/+11
| | | | | | | | | | | Bug Fix Description: People need to type in the full-path to the attribute/dataset/etc. and weren't being told to do so by the "usage" statement. Solution: Added an example and changed <names> to <path> to be more explicit...
* [svn-r2737] Purpose:Bill Wendling2000-10-252-70/+337
| | | | | | | | | | | | Feature Description: Allow dumping of variable length records. This is a first-time stab at this. It doesn't break any tests on my Linux box and it does output the variable length data, but it might look ugly (it doesn't handle new-lines as of yet)...I'm open to suggestions on what should be done next, what new features to add/remove... Platforms tested: Linux
* [svn-r2736] Purpose:Quincey Koziol2000-10-256-268/+352
| | | | | | | | | | Code optimization Description: Minor tweaks throughout the optimized regular hyperslab code to increase speed. This set of improvements increase the benchmark time from taking ~5.46 seconds to ~4.50 seconds, or around a 20% further speedup. Platforms tested: Solaris 2.6 (baldric)
* [svn-r2735] Purpose:Albert Cheng2000-10-251-1/+1
| | | | | | | | | | | | | | | | | | Bug fix Description: Recent changes to H5FD_read() added a new argument of type of data to be written but the MPIO file driver call to H5FD_read() was not updated. Also, the prototype of H5FD_read() in H5Fprivate.h was "screened out", thus the compiler could not detect the inconsistency. With the mismatched arguments, MPIO failed badly. Solution: Update the H5FD_read() call with the new parameter. Since the call is used by H5Dread call so far, it is hardcoded to use H5FD_MEM_DRAW as the value. If the call is used besides for H5Dread, this parameter needs to be better defined. (Still need to fix the prototype being blocked off.) Platforms tested: O2K -64 parallel.
* [svn-r2734] updated.Albert Cheng2000-10-241-0/+3
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* [svn-r2733] Purpose:Albert Cheng2000-10-242-0/+2697
| | | | | | | | | | | New tests Description: Added a new test file (tsaf.h5) for h5dump and h5ls. The test file was created by lib SAF team. This file used to cause previous version of hdf5 tools to core dump. tsaf.ddl is the expected output from h5dump. Platforms tested: IRIX64 -64, linux
* [svn-r2732] Purpose:Albert Cheng2000-10-242-0/+6
| | | | | | | | | | New tests Description: Added a new test file (tsaf.h5) for h5dump and h5ls. The test file was created by lib SAF team. This file used to cause previous version of hdf5 tools to core dump. Platforms tested: IRIX64 -64, linux
* [svn-r2731] Purpose:Bill Wendling2000-10-241-0/+2
| | | | | | | | Bug Fix Description: make distclean left *.{o,lo,h5} files in the directory. Solution: Added them to the DISTCLEAN macro.
* [svn-r2730] Elena Pourmal2000-10-242-51/+74
| | | | | | | | | | | | | Purpose: Bug fix. Description: fortranlib_test.f90 had a typo in the format string. Would not compile on O2K. Test did not check the length of the attribute name. Solution: Fixed format strings. Added more code to test returned attribute name length. Platforms tested: O2K, Linux
* [svn-r2729] Elena Pourmal2000-10-242-7/+6
| | | | | | | | | | | | | Purpose: Bug fix Description: Attribute test failed on O2K. h5aget_name_f function could not return correct attribute name. Solution: size function parameter had wrong datatype in F90 subroutine. Fixed it to be of INTEGER(SIZE_T) type. Platforms tested: O2K, Linux
* [svn-r2728] Purpose:Bill Wendling2000-10-241-2/+5
| | | | | | | | | | | | Bug Fix Description: Getting messages while compiling the || fortran stuff that it didn't have a rule to make "H5Pf_parallel.c". Solution: The quotes were confusing it. I placed the text in another macro to fix this. Platforms tested: Modi4
* [svn-r2727] Raymond Lu2000-10-241-0/+285
| | | | | | | | | | | | | Purpose: This file describes the experiencing of OpenMP with hdf5. Description: All detailed description is in the file. Solution: [details about the changes, algorithm, etc...] [Please as detail as you can since your own explanation is better than others guessing it from the code.] Platforms tested: Everything was done on modi4.
* [svn-r2726] Updated.Albert Cheng2000-10-241-0/+3
| | | | | Platforms tested: eirene via bin/chkmanifest
* [svn-r2725] Purpose:Albert Cheng2000-10-241-5/+19
| | | | | | | | | | | | | | Bug fix. Description: Could not find the pre-created file for the H5S_MAX_RANK test when --srcdir option is used. testhdf5 was looking for it in the currect directory only. Solution: Make use of the value of the environment variable srcdir that is passed to the tests. Compose the real location of the testfile in order to open it even from a remote build directory. Platforms tested: Modi4, arabica, eirene
* [svn-r2724] Purpose:Albert Cheng2000-10-242-1/+120
| | | | | | | | | | | | | | new feature Description: h5ls was not tested Solution: Added a test script, testh5ls.sh, to give h5ls some tests. Since the output from h5ls is sometime machine dependent (e.g., Datatypes), can not compare them with expected output. For now, run it against various hdf5 binary files. If it exits with 0, consider it passes. Platforms tested: IRIX64, eirene, arabica.
* [svn-r2723] Purpose:Albert Cheng2000-10-241-34/+36
| | | | | | | | | tidy it up Description: Change the variable names so that it looks more generic. Plan to make it a generic script test template. Platforms tested: IRIX64-64, linux, solaris 2.7
* [svn-r2722] Purpose:Quincey Koziol2000-10-2430-73/+81
| | | | | | | | | | Feature symmetry Description: A while ago I needed to get the 'type' of data being accessed during writes to the VFL driver, so I put in code to get the information down there. Albert asked for the same information during reads, so I've added that in. Tested: FreeBSD 4.1.1 (hawkwind)
* [svn-r2721] Purpose:Quincey Koziol2000-10-241-13/+74
| | | | | | | | | | Feature symmetry Description: A while ago I needed to get the 'type' of data being accessed during writes to the VFL driver, so I put in code to get the information down there. Albert asked for the same information during reads, so I've added that in. Tested: Netscape
* [svn-r2720] Purpose:Quincey Koziol2000-10-241-0/+3
| | | | Update release notes for VFL updates.
* [svn-r2719] Purpose:Bill Wendling2000-10-231-0/+5
| | | | | | | | | | | Bug fix Description: During a `reconfigure', it wasn't traversing the subdirectories... Solution: Added a loop to the reconfigure logic to do just that. Platforms tested: NOT tested...
* [svn-r2717] Purpose:Quincey Koziol2000-10-203-2/+13
| | | | | | | | | | | | | | | | Change test files for increased maximum dimension constant. Description: space_overflow.c - added some simple error checking. th5s.c - corrected test case for maximem dimensions to use correct file and actually test what is supposed to be tested... :-) th5s.h5 - regenerated with increased dimensions. Platforms Tested: FreeBSD 4.1.1 (hawkwind) Solaris 2.5 (baldric)
* [svn-r2716] Purpose:Quincey Koziol2000-10-201-1/+1
| | | | | | | | | | Increase constant for H5S_MAX_RANK from 31 -> 32 Description: To better align the HDF5 library's maximum dimenions with HDF4 and netCDF, the maximum number of dimensions has been increased to 32. Platforms Tested: FreeBSD 4.1.1 (hawkwind) Solaris 2.5 (baldric)
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