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* Add missing intro folderAllen Byrne2017-09-201-7/+14
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* Use define name instead.Allen Byrne2017-09-201-1/+1
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* Fix VS2013 compile errorAllen Byrne2017-09-201-0/+9
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* Merge pull request #679 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-09-203-44/+87
|\ | | | | | | | | | | * commit 'd901d3402ac42cbec82629b6e7436f5fa608f429': Add chekexe and chklog generation to tests Fix call format
| * Add chekexe and chklog generation to testsAllen Byrne2017-09-202-26/+51
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| * Fix call formatAllen Byrne2017-09-201-18/+36
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* Merge pull request #676 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-09-201-2/+14
|\ | | | | | | | | * commit '0a9bc574e8d40b51c0c1c16501d3a0365e08df91': Fix find package process
| * Fix find package processAllen Byrne2017-09-191-2/+14
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* | Merge pull request #674 in HDFFV/hdf5 from ~BMRIBLER/hdf5_bmr_cpp3:develop ↵Binh-Minh Ribler2017-09-1934-90/+35348
|\ \ | |/ |/| | | | | | | | | | | | | | | | | to develop This merge includes C2Cppfunction_map.mht, which Barbara will verify at a later time when documentation is re-generated. * commit 'f1871c6ac48db02bd7e66f2c0df64bca50bccd90': Updated for C2Cppfunction_map.mht Added documentation file Description: Added a single page html file, C2Cppfunction_map.mht, that shows the current mapping of C APIs to C++ member functions. This page can be reached from the main page of the C++ reference manual. Miscellaneous code cleanup Description: - Removed two inadvertently-added Group constructors in the header file. There was no implementation. - Removed deprecated H5Location and H5Object constructors that take an existing ID. - Miscellaneous improvements in comments, including updating URLs. Platforms tested: Linux/32 2.6 (jam) Linux/64 (jelly) Darwin (osx1010test)
| * Updated for C2Cppfunction_map.mhtBinh-Minh Ribler2017-09-181-0/+1
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| * Added documentation fileBinh-Minh Ribler2017-09-172-0/+35296
| | | | | | | | | | | | | | Description: Added a single page html file, C2Cppfunction_map.mht, that shows the current mapping of C APIs to C++ member functions. This page can be reached from the main page of the C++ reference manual.
| * Merge branch 'develop' of ↵Binh-Minh Ribler2017-09-150-0/+0
| |\ | | | | | | | | | https://bitbucket.hdfgroup.org/scm/~bmribler/hdf5_bmr_cpp3 into develop
| * | Miscellaneous code cleanupBinh-Minh Ribler2017-09-1532-90/+51
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: - Removed two inadvertently-added Group constructors in the header file. There was no implementation. - Removed deprecated H5Location and H5Object constructors that take an existing ID. - Miscellaneous improvements in comments, including updating URLs. Platforms tested: Linux/32 2.6 (jam) Linux/64 (jelly) Darwin (osx1010test)
* | | Merge pull request #675 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-09-193-21/+61
|\ \ \ | | | | | | | | | | | | | | | | | | | | * commit '5eafce2e048f8cfdc7ac008648623849304fcba5': Restore previous Add chklog and chexe generation to Java autootools tests
| * | | Restore previousAllen Byrne2017-09-191-1/+1
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| * | | Add chklog and chexe generation to Java autootools testsAllen Byrne2017-09-192-20/+60
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* | | Merge pull request #668 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-09-197-102/+26
|\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | * commit '75e6579cf232e6c2a8f8c0519a67801fd5dd1f7b': Restore GEN_HDRS and remove cache sets for defaults Test program generation should default off Generate headers for 1.10 should default off
| * \ \ Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2017-09-1936-161/+469
| |\ \ \ | |/ / / |/| | | | | | | | | | | | | | | | | | | * commit '46c4038fcb5af255d8784a1b58292273d38ac152': Amend CMakeLists.txt to add t_filters_parallel to CMake Fixed incorrect calls New overloaded functions and tests Description: - Added VarLenType::VarLenType(const DataType& base_type) - Marked VarLenType::VarLenType(const DataType* base_type) deprecated - Added a static wrapper for H5Tdetect_class for PredType static bool DataType::detectClass(const PredType& pred_type, ...) - Removed the deprecated function Exception::printError() from code - Miscellaneous improvements in comments - Added test functions test_detect_type_class() and test_vltype() Platforms tested: Linux/32 2.6 (jam) Linux/64 (jelly) Darwin (osx1010test)
* | | | Merge pull request #673 in HDFFV/hdf5 from ~JHENDERSON/hdf5:develop to developJordan Henderson2017-09-151-0/+1
|\ \ \ \ | |_|_|/ |/| | | | | | | | | | | * commit 'b61bb248cdf5ffe3c77a92dba99955390f028f12': Amend CMakeLists.txt to add t_filters_parallel to CMake
| * | | Amend CMakeLists.txt to add t_filters_parallel to CMakeJordan Henderson2017-09-151-0/+1
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* | | Merge pull request #672 in HDFFV/hdf5 from ~BMRIBLER/hdf5_bmr_cpp3:develop ↵Binh-Minh Ribler2017-09-1516-52/+52
|\ \ \ | | |/ | |/| | | | | | | | | | | | | | | | | | | to develop Fixed incorrect calls in examples causing daily test failure. * commit '5cf381597dddc2f551a344a102a4975ea0d373af': Fixed incorrect calls
| * | Fixed incorrect callsBinh-Minh Ribler2017-09-1416-52/+52
|/ / | | | | | | | | | | | | | | Description: Replaced the calls to the deprecated function printError with printErrorStack in examples. Platforms tested: Linux/32 2.6 (jam)
* | Merge pull request #671 in HDFFV/hdf5 from ~BMRIBLER/hdf5_bmr_cpp3:develop ↵Binh-Minh Ribler2017-09-1419-109/+416
|\ \ | | | | | | | | | | | | | | | | | | | | | | | | to develop New overloaded functions and tests * commit 'd708dca2831839714be6593b314acd59726b532f': New overloaded functions and tests Description: - Added VarLenType::VarLenType(const DataType& base_type) - Marked VarLenType::VarLenType(const DataType* base_type) deprecated - Added a static wrapper for H5Tdetect_class for PredType static bool DataType::detectClass(const PredType& pred_type, ...) - Removed the deprecated function Exception::printError() from code - Miscellaneous improvements in comments - Added test functions test_detect_type_class() and test_vltype() Platforms tested: Linux/32 2.6 (jam) Linux/64 (jelly) Darwin (osx1010test)
| * \ Merge branch 'develop' of ↵Binh-Minh Ribler2017-09-121-3582/+2230
| |\ \ | |/ / |/| | | | | https://bitbucket.hdfgroup.org/scm/~bmribler/hdf5_bmr_cpp3 into develop
| * | New overloaded functions and testsBinh-Minh Ribler2017-09-1219-109/+416
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: - Added VarLenType::VarLenType(const DataType& base_type) - Marked VarLenType::VarLenType(const DataType* base_type) deprecated - Added a static wrapper for H5Tdetect_class for PredType static bool DataType::detectClass(const PredType& pred_type, ...) - Removed the deprecated function Exception::printError() from code - Miscellaneous improvements in comments - Added test functions test_detect_type_class() and test_vltype() Platforms tested: Linux/32 2.6 (jam) Linux/64 (jelly) Darwin (osx1010test)
| | * Restore GEN_HDRS and remove cache sets for defaultsAllen Byrne2017-09-136-100/+20
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| | * Test program generation should default offAllen Byrne2017-09-121-0/+3
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| | * Generate headers for 1.10 should default offAllen Byrne2017-09-124-6/+7
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* | Merge pull request #666 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-09-111-3/+3
|\ \ | | | | | | | | | | | | * commit '33812aee4c55a406b4e41a06a5ae42a96fa72aa5': Fix merge typos
| * | Fix merge typosAllen Byrne2017-09-111-3/+3
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* | Merge pull request #663 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-09-081-3582/+2230
|\ \ | |/ |/| | | | | * commit '77313a1d39a4d08827df9c0186028b63c1ee1fd1': HDFFV-9774 Fix code merge
| * HDFFV-9774 Fix code mergeAllen Byrne2017-09-081-3582/+2230
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| * Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2017-09-0818-30/+543
| |\ | |/ |/| | | | | | | * commit 'ff2c10c3f0f2174545e608dfbf668a05ad8d0f10': Adding variable initialization Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test) Adding new C++ wrappers Description: Added wrappers for H5Tencode to class DataType and H5Tdecode to classes DataType and its subclasses.
* | Merge pull request #661 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-09-089-38/+47
|\ \ | |/ | | | | | | | | | | * commit 'aab6d2466f9640d1e08287b0e407124234f6022b': HDFFV-10276 Remove whitespace HDFFV-10276 Remove whitespace HDFFV-10276 Add UD flag option to h5repack
| * HDFFV-10276 Remove whitespaceAllen Byrne2017-09-081-1/+1
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| * HDFFV-10276 Remove whitespaceAllen Byrne2017-09-081-2/+2
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| * HDFFV-10276 Add UD flag option to h5repackAllen Byrne2017-09-079-36/+45
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* | Merge pull request #654 in HDFFV/hdf5 from ~BMRIBLER/hdf5_bmr_cpp3:develop ↵Binh-Minh Ribler2017-09-0818-30/+543
|\ \ | |/ |/| | | | | | | | | | | | | | | to develop Merge after making the changes Dana suggested. * commit '47a2d5e48f5f3dcfed57c5be01178952030828c2': Adding variable initialization Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test) Adding new C++ wrappers Description: Added wrappers for H5Tencode to class DataType and H5Tdecode to classes DataType and its subclasses.
| * Adding variable initializationBinh-Minh Ribler2017-09-078-12/+12
| | | | | | | | | | | | | | Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
| * Merge branch 'develop' of ↵Binh-Minh Ribler2017-09-0422-899/+876
| |\ | | | | | | | | | https://bitbucket.hdfgroup.org/scm/~bmribler/hdf5_bmr_cpp3 into develop
| * | Adding new C++ wrappersBinh-Minh Ribler2017-09-0418-30/+543
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: Added wrappers for H5Tencode to class DataType and H5Tdecode to classes DataType and its subclasses. // Creates a binary object description of this datatype. void DataType::encode() // Returns the decoded type from the binary object description. virtual DataType* DataType::decode() const; virtual DataType* ArrayType::decode() const; virtual DataType* CompType::decode() const; virtual DataType* DataType::decode() const; virtual DataType* EnumType::decode() const; virtual DataType* FloatType::decode() const; virtual DataType* IntType::decode() const; virtual DataType* StrType::decode() const; virtual DataType* VarLenType::decode() const; Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* | | Merge pull request #659 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-09-071-43/+87
|\ \ \ | | | | | | | | | | | | | | | | * commit 'fa8ed205ba074d19c2a66855a6ecdb959ef38e0d': HDFFV-9988 merge findmpi from cmake and add intel path
| * | | HDFFV-9988 merge findmpi from cmake and add intel pathAllen Byrne2017-09-071-43/+87
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* | | Merge pull request #651 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-09-0731-394/+571
|\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | * commit 'd3e98edab0282be98b9f5ce67e9083fb93b90cda': HDFFV-9774 Apply standard mask to .err files HDFFV-10276 Add filter mask for standard err HDFFV-9774 Add enable-error-stack argument to h5diff
| * | | HDFFV-9774 Apply standard mask to .err filesAllen Byrne2017-09-066-12/+12
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| * | | HDFFV-10276 Add filter mask for standard errAllen Byrne2017-09-067-12/+15
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| * | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2017-09-0515-88/+4401
| |\ \ \ | |/ / / |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'bf570b1a7ca3b9cbd4a59f0933a19ce1bcc99103': (71 commits) Amend tests to explicitly use H5Dcreate2 and H5Dopen2 Revert malloc's back to using hard-coded type for sizeof Minor comment refactoring Update documentation Finish up Parallel Compression test scaling work Partial update for scaling parallel filters tests Modify t_dset.c in lieu of Parallel Compression changes Updated H5C__flush_single_entry() in H5C.c to correct duplicate metadata write bug observed in 1.10.1. Amend MANIFEST Add test for write parallel; read serial case Fix uninitialized array issue in test Test updates Fix bug where incorrect amount of data was being read from the file Add data verification for first half of tests Start adding data verification Switch tests over to use testing macros Updates to parallel filters tests Move test files to testpar directory Add test file to build process Suggested changes from code review ...
* | | | Merge pull request #592 in HDFFV/hdf5 from ~JHENDERSON/hdf5:develop to developJordan Henderson2017-09-0515-88/+4401
|\ \ \ \ | |_|_|/ |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'b95986e50d1d1043952b00cad6595e8ecbff414f': (71 commits) Amend tests to explicitly use H5Dcreate2 and H5Dopen2 Revert malloc's back to using hard-coded type for sizeof Minor comment refactoring Update documentation Finish up Parallel Compression test scaling work Partial update for scaling parallel filters tests Modify t_dset.c in lieu of Parallel Compression changes Updated H5C__flush_single_entry() in H5C.c to correct duplicate metadata write bug observed in 1.10.1. Amend MANIFEST Add test for write parallel; read serial case Fix uninitialized array issue in test Test updates Fix bug where incorrect amount of data was being read from the file Add data verification for first half of tests Start adding data verification Switch tests over to use testing macros Updates to parallel filters tests Move test files to testpar directory Add test file to build process Suggested changes from code review ...
| * | | Merge branch 'develop' of ↵Jordan Henderson2017-09-0129-951/+951
| |\ \ \ | | | | | | | | | | | | | | | ssh://bitbucket.hdfgroup.org:7999/~jhenderson/hdf5.git into develop
| | * \ \ Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Jordan Henderson2017-09-0129-951/+951
| | |\ \ \ | |_|/ / / |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'abcf30f232914c1ec9b8c5f2a3bb3a621af7bfe4': HDFFV-10284 Add VS2017 support Add commentary around calling H5Screate_simple with a single element Miscellaneous improvements (cont.) Description: Put back H5Location::getNumObjs and marked as deprecated in favor of Group::getNumObjs. Platforms tested: Linux/32 2.6 (jam) Darwin (osx1010test) Miscellaneous improvements Description: Moved H5Location::getNumObjs to Group::getNumObjs (i.e., H5Gget_info) Switched reinterpret_cast to static_cast in H5Object::iterateAttrs Miscellaneous cleanup Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test) HDFFV-10282 refactor out assert calls in tools Fix the t_bigio test so that it runs on 32bit machines
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