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* Add note about single chunk caching and serial libraryJordan Henderson2018-07-261-1/+7
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* Add check for actually using the MPI file driver when caching one chunkJordan Henderson2018-07-261-1/+15
| | | Better explain rationale behind chunk caching issue fix
* Fix error message mentioning wrong MPI function usedJordan Henderson2018-07-261-1/+1
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* HDFFV-10527:corrected two more typos.Hyo-Kyung Lee2018-07-261-2/+2
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* HDFFV-10527:corrected typos in comment blocks.Hyo-Kyung Lee2018-07-261-2/+2
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* Changes based on feedback from pull request.Vailin Choi2018-07-263-6/+3
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* Vailin's fix for H5open fail when file doesn't have write permissionsLarry Knox2018-07-260-0/+0
| | | | | for user in test_misc33(). The test file can be opened read-only because the test doesn't write to it.
* Fix test_misc33() in test/tmisc.cVailin Choi2018-07-261-1/+1
| | | | Open the test file read-only so that it can be accessed for testing.
* Modifications made based on feedback from pull request.Vailin Choi2018-07-266-12/+50
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* Fix for HDFFV-10333:Vailin Choi2018-07-2620-147/+461
| | | | | | | | | 1) Check for valid object header version for a refcount messge 2) Check for invalid fill value size 3) Check for invalid dimension size in a layout message 4) Add --enable-error-stack option to h5stat 5) Add error checks to h5stat.c 6) Add tests to h5stat and h5dump
* fixed typo.Hyo-Kyung Lee2018-07-261-1/+1
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* Fix for HDFFV-10509Jordan Henderson2018-07-261-2/+15
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* Fix H5detect to use no_sanitize_address attribute and support GCC sanitizersJerome Soumagne2018-07-261-7/+5
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* Merge pull request #1124 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_10 to ↵Allen Byrne2018-06-2926-54/+576
|\ | | | | | | | | | | | | hdf5_1_10 * commit 'c0dfec8913497d62cf1ab7e13e62e3fe55d6e859': HDFFV-10519 Disable WriteVL JNI function, updgrade JNI
| * HDFFV-10519 Disable WriteVL JNI function, updgrade JNIAllen Byrne2018-06-2926-54/+576
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* Merge pull request #1121 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_10 to ↵Allen Byrne2018-06-2611-496/+608
|\ | | | | | | | | | | | | hdf5_1_10 * commit '7636342d959bfd3d023345bac76650932961d843': Push updates from develop
| * Push updates from developAllen Byrne2018-06-2611-496/+608
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* Merge pull request #1118 in HDFFV/hdf5 from ~HDFTEST/hdf5_hft:hdf5_1_10 to ↵hdftest2018-06-246-7/+7
|\ | | | | | | | | | | | | hdf5_1_10 * commit '25f80cbbec3a7d8036325784168b029cb71cc813': Snapshot version 1.10 release 3 (snap3)
| * Snapshot version 1.10 release 3 (snap3)hdftest2018-06-246-7/+7
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* Merge pull request #1110 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_10 to ↵Allen Byrne2018-06-191-332/+14
|\ | | | | | | | | | | | | | | | | hdf5_1_10 * commit 'd5e78d2ecfd19e8e912cce654462ccc6e853fb72': Update document HDFFV-10433 Updated text to address issues raised. Merge corrections from develop
| * Update documentAllen Byrne2018-06-191-327/+0
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| * HDFFV-10433 Updated text to address issues raised.Allen Byrne2018-06-111-5/+14
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| * Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_10)Allen Byrne2018-05-296-7/+7
| |\ | | | | | | | | | | | | * commit '413bc90ec95524c72d0576bc9f1fc5356e541473': Updated version to 1.10.3-snap2
| * \ Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_10)Allen Byrne2018-05-253-12/+12
| |\ \ | | | | | | | | | | | | | | | | | | | | | | | | * commit 'c1a308d7c9f361cc5720e345685ec43a2dd24297': Correct script names Fix typo Minor H5FS tweaks.
| * | | Merge corrections from developAllen Byrne2018-05-252-3/+3
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* | | | Merge pull request #1113 in HDFFV/hdf5 from ~HDFTEST/hdf5_hft:hdf5_1_10 to ↵hdftest2018-06-166-7/+7
|\ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | hdf5_1_10 Update version to snap3 * commit '67d6f8d405b16c99590f112f429a352157be3554': Snapshot version 1.10 release 3 (snap2)
| * \ \ \ Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_10)hdftest2018-06-16128-2769/+3433
| |\ \ \ \ | |/ / / / |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '87829e06189cd9b29583b5ca8065b52b1f4cd523': (30 commits) HDFFV-10405: Using h5fget_obj_count_f with a file id of H5F_OBJ_ALL_F does not work properly HDFFV-10405: Using h5fget_obj_count_f with a file id of H5F_OBJ_ALL_F does not work properly HDFFV-10405: Using h5fget_obj_count_f with a file id of H5F_OBJ_ALL_F does not work properly Cleaned up H5Fmount/unmount code. Normalization with vol_integration branch. Add fortran MPI to test and example Add mpi include folders for fortran C objects Normalization with the vol_integration branch. Fixed MANIFEST Fix usage of compression lib in shared tests Fix jni function call version Fix the error found after earlier checkin. H5O_info fixes for java and examples Added a RELASE.txt entry for HDFFV-10505. Changed 'deprecated' to indicate 'no longer supported' in the --enable-debug/production configure flags. (1) Made the change according to the pull request feedback. (2) Removed the performance test form test/th5o.c: will decide on what needs to be done to show speedup via HDFFV-10463. Normalize with vol_integration. Removed unused H5MF functions and updated FUNC_ENTER macros and naming in H5MFsection.c. Restored some unused #defines to the deprecated section of H5Dpublic.h. Changes made based on feedback from pull request #1039. ...
* | | | | Merge pull request #1111 in HDFFV/hdf5 from hdf5_1_10.sync to hdf5_1_10Scot Breitenfeld2018-06-15128-2769/+3433
|\ \ \ \ \ | |_|_|_|/ |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '57f64b92d19fed2879ee9bafe1d29bfac865d54c': (30 commits) HDFFV-10405: Using h5fget_obj_count_f with a file id of H5F_OBJ_ALL_F does not work properly HDFFV-10405: Using h5fget_obj_count_f with a file id of H5F_OBJ_ALL_F does not work properly HDFFV-10405: Using h5fget_obj_count_f with a file id of H5F_OBJ_ALL_F does not work properly Cleaned up H5Fmount/unmount code. Normalization with vol_integration branch. Add fortran MPI to test and example Add mpi include folders for fortran C objects Normalization with the vol_integration branch. Fixed MANIFEST Fix usage of compression lib in shared tests Fix jni function call version Fix the error found after earlier checkin. H5O_info fixes for java and examples Added a RELASE.txt entry for HDFFV-10505. Changed 'deprecated' to indicate 'no longer supported' in the --enable-debug/production configure flags. (1) Made the change according to the pull request feedback. (2) Removed the performance test form test/th5o.c: will decide on what needs to be done to show speedup via HDFFV-10463. Normalize with vol_integration. Removed unused H5MF functions and updated FUNC_ENTER macros and naming in H5MFsection.c. Restored some unused #defines to the deprecated section of H5Dpublic.h. Changes made based on feedback from pull request #1039. ...
| * | | | Merge branch 'develop' into hdf5_1_10.syncM. Scot Breitenfeld2018-06-1410-516/+531
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| | * \ \ \ Merge pull request #1101 in HDFFV/hdf5 from ↵Dana Robinson2018-06-1310-516/+531
| | |\ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:vi_develop_normalize to develop * commit '18fbdebb977d7a4dbaa99ec6b153a49e3b4883d5': Cleaned up H5Fmount/unmount code. Normalization with vol_integration branch. Normalization with the vol_integration branch.
| | | * | | | Cleaned up H5Fmount/unmount code.Dana Robinson2018-06-071-18/+40
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| | | * | | | Normalization with vol_integration branch.Dana Robinson2018-06-077-270/+256
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| | | * | | | Normalization with the vol_integration branch.Dana Robinson2018-06-063-235/+242
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| * | | | | | Merge branch 'develop' into hdf5_1_10.syncM. Scot Breitenfeld2018-06-124-3/+91
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| | * | | | | Merge pull request #1108 in HDFFV/hdf5 from ~BRTNFLD/hdf5_msb:develop to developScot Breitenfeld2018-06-114-3/+91
| | |\ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'fe325fb554eddceccfa1674d804d5c7aed846bde': HDFFV-10405: Using h5fget_obj_count_f with a file id of H5F_OBJ_ALL_F does not work properly HDFFV-10405: Using h5fget_obj_count_f with a file id of H5F_OBJ_ALL_F does not work properly HDFFV-10405: Using h5fget_obj_count_f with a file id of H5F_OBJ_ALL_F does not work properly
| | | * | | | | HDFFV-10405: Using h5fget_obj_count_f with a file id of H5F_OBJ_ALL_F does ↵M. Scot Breitenfeld2018-06-082-6/+6
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | not work properly misc. clean-up
| | | * | | | | HDFFV-10405: Using h5fget_obj_count_f with a file id of H5F_OBJ_ALL_F ↵M. Scot Breitenfeld2018-06-081-1/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | does not work properly added dependency on H5ff.F90 for H5_ff.F90
| | | * | | | | HDFFV-10405: Using h5fget_obj_count_f with a file id of H5F_OBJ_ALL_F does ↵M. Scot Breitenfeld2018-06-083-2/+90
| | |/ / / / / | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | not work properly h5fget_obj_count_f with H5F_OBJ_ALL_F counted objects created in h5open_f, which should not be included in the count. The function now returns the correct number of objects (i.e., objects created in h5open are not included in the total).
| * | | | | | Merge branch 'develop' into hdf5_1_10.syncM. Scot Breitenfeld2018-06-084-9/+11
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| | * | | | | Merge pull request #1103 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developScot Breitenfeld2018-06-062-4/+6
| | |\ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'df64de9eedea0cb7796f37f9c141d81c636742c7': Add fortran MPI to test and example
| | | * | | | | Add fortran MPI to test and exampleAllen Byrne2018-06-062-4/+6
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| | * | | | | Merge pull request #1102 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developScot Breitenfeld2018-06-062-5/+5
| | |\ \ \ \ \ | | | |/ / / / | | |/| | | | | | | | | | | | | | | | | | * commit '81300213e7837fd980b74d95482e0a71777773fd': Add mpi include folders for fortran C objects
| | | * | | | Add mpi include folders for fortran C objectsAllen Byrne2018-06-062-5/+5
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| * | | | | Merge branch 'develop' into hdf5_1_10.syncM. Scot Breitenfeld2018-06-04112-2245/+2804
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| | * | | | Merge pull request #1097 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop to ↵Dana Robinson2018-06-011-2/+3
| | |\ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | develop * commit 'd1719d4906009c76eb286fbfe933328395404443': Fixed MANIFEST
| | | * \ \ \ Merge branch 'develop' of ↵Dana Robinson2018-06-012-4/+4
| | | |\ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | https://bitbucket.hdfgroup.org/scm/~derobins/hdf5_der into develop
| | | * | | | | Fixed MANIFESTDana Robinson2018-06-011-2/+3
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| | * | | | | | Merge pull request #1096 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2018-06-011-1/+18
| | |\ \ \ \ \ \ | | | |_|/ / / / | | |/| | | | | | | | | | | | | | | | | | | | | * commit 'f5b0b1c60784a3dbfea6cdf6082106fc8bed0462': Fix usage of compression lib in shared tests
| | | * | | | | Fix usage of compression lib in shared testsAllen Byrne2018-06-011-1/+18
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| | * | | | | Merge pull request #1095 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developLarry Knox2018-06-012-4/+4
| | |\ \ \ \ \ | | | |/ / / / | | |/| | | | | | | | | | | | | | | | | | * commit '1a018cb3340ec8ecd4ded25ec719ac831aa165bd': Fix jni function call version
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