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| * HDFFV-10697 Disable compression option if source unavailableAllen Byrne2019-02-054-5/+22
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* Merge pull request #1521 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:hdf5_1_10 to ↵Dana Robinson2019-02-041-0/+1
|\ | | | | | | | | | | | | hdf5_1_10 * commit 'f8c838726150d953fb06fc93029139b32a20291f': Added a line for the CMake pread/write option to INSTALL_CMake.txt.
| * Added a line for the CMake pread/write option to INSTALL_CMake.txt.Dana Robinson2019-02-041-0/+1
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* Merge pull request #1519 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:hdf5_1_10 to ↵Dana Robinson2019-02-0415-44/+193
|\ | | | | | | | | | | | | hdf5_1_10 * commit '12fc6bf95507244b2f18a56f8ff76cc0ea922fea': Merge of changes from develop for 1.10.5. Added RELEASE.txt entries for new features.
| * Merge of changes from develop for 1.10.5.Dana Robinson2019-02-0415-44/+193
|/ | | | Added RELEASE.txt entries for new features.
* Merge pull request #1514 in HDFFV/hdf5 from ↵Binh-Minh Ribler2019-02-019-28/+163
|\ | | | | | | | | | | | | | | | | | | ~BMRIBLER/hdf5_1_10_bmr:hdf5_1_10 to hdf5_1_10 HDFFV-10586, HDFFV-10588, HDFFV-10684 * commit '7fb50a9700cddfb4aba6d69127590c8460031413': Renamed data file Fixed HDFFV-10586, HDFFV-10588, and HDFFV-10684
| * Renamed data fileBinh-Minh Ribler2019-02-015-5/+5
| | | | | | | | | | | | | | | | | | Description: Renamed data file with long name to a shorter name. Revised an entry in RELEASE.txt Platforms tested: Linux/64 (jelly) Darwin (osx1010test)
| * Merge branch 'hdf5_1_10' of ↵Binh-Minh Ribler2019-01-3132-969/+1162
| |\ | |/ |/| | | https://bitbucket.hdfgroup.org/scm/~bmribler/hdf5_1_10_bmr into hdf5_1_10
* | Merge pull request #1512 in HDFFV/hdf5 from ~NFORTNE2/hdf5_naf:hdf5_1_10 to ↵Neil Fortner2019-01-291-0/+6
|\ \ | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit 'ec42c4e3e141ba4df343be8e519cb704676a5424': Add RELEASE.txt note for unknown message fix (pull request 1448)
| * | Add RELEASE.txt note for unknown message fix (pull request 1448)Neil Fortner2019-01-291-0/+6
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* | Merge pull request #1510 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:hdf5_1_10 to ↵Dana Robinson2019-01-291-9/+9
|\ \ | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit 'a09bcbcb07609ee38a1ccbcfafd4fd5a9dbe27f5': Fixed a bug identified by valgrind in the cork test.
| * | Fixed a bug identified by valgrind in the cork test.Dana Robinson2019-01-291-9/+9
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* | Merge pull request #1505 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_10 to ↵Allen Byrne2019-01-283-50/+45
|\ \ | | | | | | | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit 'cfebcaa2a307192ae02d2afe859e8aa42ce76e1a': HDFFV-10686 Remove version 1 reference names Remove Not_yet_versioned files Revert CMake and fix H5Oget_info - H5Ovisit versions
| * | HDFFV-10686 Remove version 1 reference namesAllen Byrne2019-01-281-44/+44
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| * | Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_10)Allen Byrne2019-01-283-3/+19
| |\ \ | |/ / |/| | | | | | | | * commit '611ecb5db4051cbf762cc24944ee75ea5284c5d2': Fixed HDFFV-10578
* | | Merge pull request #1480 in HDFFV/hdf5 from ↵Binh-Minh Ribler2019-01-283-3/+19
|\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | ~BMRIBLER/hdf5_1_10_bmr:hdf5_1_10 to hdf5_1_10 * commit '2880ef43eb03526e7d75551720547b85e66a3086': Fixed HDFFV-10578
| | * | Remove Not_yet_versioned filesAllen Byrne2019-01-281-5/+0
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| | * | Revert CMake and fix H5Oget_info - H5Ovisit versionsAllen Byrne2019-01-271-1/+1
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* | | Merge pull request #1501 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_10 to ↵Allen Byrne2019-01-263-93/+93
|\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit 'd0abe6502af9846f77a647fddb0fda1da11a0a75': CMake fix, makefile fix, direct_chunk valgrind fix
| * | | CMake fix, makefile fix, direct_chunk valgrind fixAllen Byrne2019-01-253-93/+93
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* | | Merge pull request #1493 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_10 to ↵Allen Byrne2019-01-2411-580/+532
|\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit '217d57d30d2d62f987affcc8859df982dc86d2b3': CMake fix Java html fix and cmake update HDFFV-10686 add note HDFFV-10686 revert H5Oget_info1 to H5Oget_info(H5Ovisit)
| * | | CMake fixAllen Byrne2019-01-241-1/+1
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| * | | Java html fix and cmake updateAllen Byrne2019-01-243-66/+74
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| * | | HDFFV-10686 add noteAllen Byrne2019-01-241-0/+15
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| * | | HDFFV-10686 revert H5Oget_info1 to H5Oget_info(H5Ovisit)Allen Byrne2019-01-247-515/+444
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* | | | Merge pull request #1490 in HDFFV/hdf5 from ~JHENDERSON/hdf5:hdf5_1_10 to ↵Jordan Henderson2019-01-242-139/+227
|\ \ \ \ | |/ / / |/| | | | | | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit 'e90d59a69f2750ac55ef5da20df5e8cba7693134': Add RELEASE.txt note for parallel filters test fix Updates to t_filters_parallel for missing filters
| * | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_10)Jordan Henderson2019-01-244-17/+37
| |\ \ \ | |/ / / |/| | | | | | | | | | | | | | | | | | | | | | | * commit 'd26963b180a052ac063907f95596a7ecad08ef8e': Add clear objects to ignore tests Add new clear tests to ignore list Cleanup variable names HDFFV-10685 Always set version flags on OSX
* | | | Merge pull request #1492 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_10 to ↵Allen Byrne2019-01-224-17/+37
|\ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit '7367fc0c1b916cffe50d1b8d729ccccfd6a9ec77': Add clear objects to ignore tests Add new clear tests to ignore list Cleanup variable names HDFFV-10685 Always set version flags on OSX
| * | | | Add clear objects to ignore testsAllen Byrne2019-01-221-1/+5
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| * | | | Add new clear tests to ignore listAllen Byrne2019-01-221-0/+5
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| * | | | Cleanup variable namesAllen Byrne2019-01-221-2/+2
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| * | | | HDFFV-10685 Always set version flags on OSXAllen Byrne2019-01-222-14/+25
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| * | | Add RELEASE.txt note for parallel filters test fixJordan Henderson2019-01-221-0/+7
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| * | | Updates to t_filters_parallel for missing filtersJordan Henderson2019-01-221-139/+220
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* | | Merge pull request #1488 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_10 to ↵Larry Knox2019-01-212-13/+13
|\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit 'c817bcdf0d345c8dbd2943be44b55db290cfd09f': MPI vars need passed in, change to grepTest Add parallel runtest for examples
| * | | MPI vars need passed in, change to grepTestAllen Byrne2019-01-204-339/+11
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| * | | Add parallel runtest for examplesAllen Byrne2019-01-193-4/+332
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* | | | Merge pull request #1486 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2019-01-205-9/+128
|\ \ \ \ | |/ / / |/| | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit '7880089c0be7eb6625cc9982775b522aee523b65': Merge pull request #1450 in HDFFV/hdf5 from ~SONGYULU/hdf5_ray:TRILAB-98-dt_arith-and-cpp_testhdf5-tests to develop
| * | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_10)Larry Knox2019-01-197-60/+73
| |\ \ \ | |/ / / |/| | | | | | | | | | | * commit '89b5b64b5c2db40e89e3304fa138de7c2ad1483f': Fix CMake policy 54 warnings
* | | | Merge pull request #1487 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_10 to ↵Allen Byrne2019-01-197-60/+73
|\ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit '9f61f559d1541066b07c02609579bf053099ab90': Fix CMake policy 54 warnings
| * | | | Fix CMake policy 54 warningsAllen Byrne2019-01-187-60/+73
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| * | | Merge pull request #1450 in HDFFV/hdf5 from ↵Ray Lu2019-01-185-9/+128
|/ / / | | | | | | | | | | | | | | | | | | | | | | | | ~SONGYULU/hdf5_ray:TRILAB-98-dt_arith-and-cpp_testhdf5-tests to develop * commit 'b02de315b93ac29d2483a91d526b110a25073505': NNSA Tri-LabsTRILAB-98: Another two test cases out. NNSA Tri-Labs TRILAB-98: Taking out a few more test cases. NNSA Tri-Labs TRILAB-98 dt_arith and cpp_testhdf5 tests fail on sierra.llnl.gov: According to the group decision, simply provide a macro to disable some failing test cases on sierra (IBM power9 cpu). All failing cases involve long double data type.
| | * Fixed HDFFV-10586, HDFFV-10588, and HDFFV-10684Binh-Minh Ribler2019-01-319-28/+163
| |/ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: HDFFV-10586 CVE-2018-17434 Divide by zero in h5repack_filters Added a check for zero value HDFFV-10588 CVE-2018-17437 Memory leak in H5O_dtype_decode_helper This is actually an Invalid read issue. It was found that the attribute name length in an attribute message was corrupted, which caused the buffer pointer to be advanced too far and later caused an invalid read. Added a check to detect attribute name and its length mismatch. The fix does not cover all cases, but it'll reduce the chance of this issue when a name length is corrupted or the attribute name is corrupted. HDFFV-10684 H5Ewalk does not stop until all errors in the stack are visited The test for HDFFV-10588 has revealed a bug in H5Ewalk. H5Ewalk did not stop midway even when the call back function returns H5_ITER_STOP. This is because a condition is missing from the for loops in H5E__walk causing the callback functions unable to stop until all the errors in the stack are iterated. Quincey advised on the final fix. In this fix, "status" is switched to "ret_value" and HGOTO_ERROR to HERROR, and the for loops won't continue when "ret_value" is not 0. Platforms tested: Linux/64 (jelly) Linux/64 (platypus) Darwin (osx1011test)
| * Merge branch 'hdf5_1_10' of ↵Binh-Minh Ribler2019-01-155-15/+65
| |\ | |/ |/| | | https://bitbucket.hdfgroup.org/scm/~bmribler/hdf5_1_10_bmr into hdf5_1_10
* | Merge pull request #1478 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2019-01-151-2/+4
|\ \ | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit '0250b3650fbcec1f592f4a7371158d6b81db01c0': Add check for existing links in hl/fortran/src/Makefile.am.
| * \ Merge branch 'hdf5_1_10' of ↵Larry Knox2019-01-151-1/+1
| |\ \ | |/ / |/| | | | | https://bitbucket.hdfgroup.org/scm/~lrknox/hdf5_lrk into hdf5_1_10
* | | Merge pull request #1477 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_10 to ↵Allen Byrne2019-01-141-1/+1
|\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit '1b2fc19a8f46bff2d1ac8e25dbb40322d377eef3': Correct fix for new policy Fix for new policy
| * | | Correct fix for new policyAllen Byrne2019-01-141-1/+1
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| * | | Fix for new policyAllen Byrne2019-01-141-1/+1
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| * | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_10)Allen Byrne2019-01-144-14/+62
| |\ \ \ | |/ / / |/| | | | | | | | | | | | | | | | | | | * commit '3476c7d13d4124f7e0752f251a667bef6b4fbf68': Merge pull request #1429 in HDFFV/hdf5 from HDFFV-10596-fortran-library-names-differ to develop Work around compiler fussiness on platypus. Fix for debug assert in H5FDmpio.c
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