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* HDFFV-8611 add autotools testAllen Byrne2017-05-221-1/+7
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* Remove obsolete functionAllen Byrne2017-05-221-32/+0
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* HDFFV-8611 change h5repack to save the root group creation orderAllen Byrne2017-05-2213-44/+191
| | | Added test and new arguments to control the the input file parsing.
* Merge pull request #527 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-05-198-16/+31
|\ | | | | | | | | | | | | * commit '973aebe25f87b84ff6dd3d9eca51b76643090564': Add debug trace commands HDFFV-9055 Correct file generator Added note about 9055 and 10128, 9995 not needed
| * Add debug trace commandsAllen Byrne2017-05-191-4/+17
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| * HDFFV-9055 Correct file generatorAllen Byrne2017-05-186-3/+3
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| * Added note about 9055 and 10128, 9995 not neededAllen Byrne2017-05-181-9/+11
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* Merge pull request #521 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-05-178-272/+231
|\ | | | | | | | | | | | | | | * commit 'fcc56184f1699fc1d35b042acb1388cc76b8ea16': Whitespace Move execeutable command after declaration HDFFV-9055 add test files HDFFV-9055 Handle H5T_ARRAY types Create variables just for diff_array function Whitespace updates
| * WhitespaceAllen Byrne2017-05-171-6/+6
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| * Move execeutable command after declarationAllen Byrne2017-05-171-1/+1
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| * HDFFV-9055 add test filesAllen Byrne2017-05-176-9/+54
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| * HDFFV-9055 Handle H5T_ARRAY typesAllen Byrne2017-05-161-257/+171
|/ | | | Create variables just for diff_array function Whitespace updates
* Merge pull request #519 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-05-1614-127/+153
|\ | | | | | | | | | | * commit '71637634ac96b6167b384ebb461ce3b9ea66b4f8': HDFFV-9995 Clarify help text HDFFV-10128 Fixed string length with no null fixed
| * HDFFV-9995 Clarify help textAllen Byrne2017-05-1611-111/+144
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| * HDFFV-10128 Fixed string length with no null fixedAllen Byrne2017-05-163-16/+9
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* Merge pull request #516 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developLarry Knox2017-05-156-41/+108
|\ | | | | | | | | | | * commit '56c3ec98207bb6c4b3e6a7b9523c2a1e849879c3': HDFFV-10128 add test to check null term Test is another dataset HDFFV-10128 Fix null term strings
| * HDFFV-10128 add test to check null termAllen Byrne2017-05-156-37/+94
| | | | | | Test is another dataset
| * HDFFV-10128 Fix null term stringsAllen Byrne2017-05-121-7/+17
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* | Merge pull request #515 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to ↵Vailin Choi2017-05-152-344/+831
|\ \ | |/ |/| | | | | | | | | develop * commit '54dff331778a660824961fdf6359e4eae998a13c': Incorporate additional code changes for the H5DOread_chunk patch from GE Heathcare (HDFFV-9934) This is the similar set of changes that was checked in to 1.8 branch: Incorporate the code changes that were missing from the original patch: (1) Additional tests in hl/test/test_dset_opt.c (2) Fix in src/H5Dchunk.c for direct access when an entry is in chunk cache but not dirty Tested on platypus, ostrich, kituo, mayll, osx1010test, moohan, quail, emu.
| * Incorporate additional code changes for the H5DOread_chunk patch from GE ↵Vailin Choi2017-05-152-344/+831
|/ | | | | | | | | | Heathcare (HDFFV-9934) This is the similar set of changes that was checked in to 1.8 branch: Incorporate the code changes that were missing from the original patch: (1) Additional tests in hl/test/test_dset_opt.c (2) Fix in src/H5Dchunk.c for direct access when an entry is in chunk cache but not dirty Tested on platypus, ostrich, kituo, mayll, osx1010test, moohan, quail, emu.
* Merge pull request #512 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop to developDana Robinson2017-05-122-5/+125
|\ | | | | | | | | * commit 'f95ef72a5e9827dfa63e4722938a58a8c9d686c0': Merged HDFFV-10187 direct chunk overwrite bugfix to develop from 1.10 branch.
| * Merged HDFFV-10187 direct chunk overwrite bugfix to develop from 1.10 branch.Dana Robinson2017-05-122-5/+125
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* Merge pull request #506 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-05-112-0/+4
|\ | | | | | | | | * commit '0cb8152b8e97d659e076b42340509c41b3919754': HDFFV-10186 Need to pull the flag into the script
| * HDFFV-10186 Need to pull the flag into the scriptAllen Byrne2017-05-112-0/+4
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* Merge pull request #503 in HDFFV/hdf5 from ↵Allen Byrne2017-05-1026-147/+601
|\ | | | | | | | | | | | | | | | | | | | | ~BYRN/hdf5_adb:bugfix/HDFFV-10186-tbitnopaque-test to develop * commit 'ec0935a924a84b18b29473b4fcec7c3f4e1aca76': HDFFV-10186 xml test also needs endianess aware files HDFFV-10186 - h5tools_str_append is not printf HDFFV-10186 braces formatting Fix reference file contents HDFFV-10186 Add endianess to bitfield and fix tests
| * HDFFV-10186 xml test also needs endianess aware filesAllen Byrne2017-05-105-7/+123
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| * HDFFV-10186 - h5tools_str_append is not printfAllen Byrne2017-05-101-3/+3
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| * HDFFV-10186 braces formattingAllen Byrne2017-05-101-72/+59
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| * Fix reference file contentsAllen Byrne2017-05-101-1/+1
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| * HDFFV-10186 Add endianess to bitfield and fix testsAllen Byrne2017-05-1023-83/+434
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* | Merge pull request #505 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to developLarry Knox2017-05-101-1/+1
|\ \ | |/ |/| | | | | * commit 'c8a5520d3aa3a526460c81507f2f985dc534b14f': Call to H5Dopen has H5dopen2 arguments at line 12704 of test/dsets.c - changed to H5Dopen2 to fix failure with --with-default-api-version=v16 configure option.
| * Call to H5Dopen has H5dopen2 arguments at line 12704 of test/dsets.c -lrknox2017-05-101-1/+1
|/ | | | | changed to H5Dopen2 to fix failure with --with-default-api-version=v16 configure option.
* Merge pull request #501 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-05-104-281/+229
|\ | | | | | | | | * commit 'e4e261173f85de6f83651abd6950793d7b930a20': HDFFV-10186 more whitespace formatting
| * HDFFV-10186 more whitespace formattingAllen Byrne2017-05-104-281/+229
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* Merge pull request #497 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-05-107-807/+746
|\ | | | | | | | | * commit '4f36f613a6de09d8ec197b7e5a4a72dbdb9417a2': HDFFV-10186 Whitespace change Mostly tabs to spaces Remove Modifications comments
| * HDFFV-10186 Whitespace changeAllen Byrne2017-05-097-807/+746
| | | | | | | | Mostly tabs to spaces Remove Modifications comments
* | Merge pull request #498 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to ↵Vailin Choi2017-05-091-0/+1
|\ \ | |/ |/| | | | | | | | | develop * commit '8482314d7db83c47947af8ca50457cdb1ddae366': Fix for HDFFV-10051 Fix missing declaration for H5D__layout_compact_dirty_test(). Tested on mayll and osx1010test.
| * Fix for HDFFV-10051Vailin Choi2017-05-091-0/+1
|/ | | | | Fix missing declaration for H5D__layout_compact_dirty_test(). Tested on mayll and osx1010test.
* Merge pull request #494 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to ↵Vailin Choi2017-05-094-9/+172
|\ | | | | | | | | | | | | | | develop * commit 'd436db6c6efdfe7e9dbe06a642715116ef0eb5e3': Fix for the two issues reported in HDFFV-10051 Modifications made based on the review comments from pull request #494 Tested on moohan, mayll, kituo, platypus, ostrich, osx1010test, quail, emu. Fix for the two issues reported in HDFFV-10051: (1) Repeated open/close of a compact dataset fails due to the increment of ndims in the dataset structure for every open. --This is done only for chunked dataset via H5D__chunk_set_sizes(). (2) layout "dirty" flag for a compact dataset is not reset properly after flushing the data at dataset close. --Reset the "dirty" flag before flushing the message to the object header via H5O_msg_write(). Tested on moohan, kituo, platypus, ostrich, osx1010test, quail, emu.
| * Fix for the two issues reported in HDFFV-10051Vailin Choi2017-05-093-14/+50
| | | | | | | | | | Modifications made based on the review comments from pull request #494 Tested on moohan, mayll, kituo, platypus, ostrich, osx1010test, quail, emu.
| * Fix for the two issues reported in HDFFV-10051:Vailin Choi2017-05-073-3/+130
| | | | | | | | | | | | | | | | | | | | | | (1) Repeated open/close of a compact dataset fails due to the increment of ndims in the dataset structure for every open. --This is done only for chunked dataset via H5D__chunk_set_sizes(). (2) layout "dirty" flag for a compact dataset is not reset properly after flushing the data at dataset close. --Reset the "dirty" flag before flushing the message to the object header via H5O_msg_write(). Tested on moohan, kituo, platypus, ostrich, osx1010test, quail, emu.
* | Merge pull request #496 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-05-093-1483/+1431
|\ \ | |/ |/| | | | | * commit '5263bc9029dcf06779a0ec2b89688912443a4bfa': HDFFV-10186 Whitespace changes Mostly replacing tabs with spaces Removed empty mod sections
| * HDFFV-10186 Whitespace changesAllen Byrne2017-05-093-1483/+1431
|/ | | | Mostly replacing tabs with spaces Removed empty mod sections
* Merge pull request #491 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to developLarry Knox2017-05-052-336/+791
|\ | | | | | | | | | | * commit '28f4873e7fc93de865c3e180f09d7221569f64ff': Update one missed version string. Update release_docs/HISTORY-1_10.txt and RELEASE.txt after HDF5 1.10.1 release.
| * Update one missed version string.lrknox2017-05-051-1/+1
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| * Update release_docs/HISTORY-1_10.txt and RELEASE.txt after HDF5 1.10.1lrknox2017-05-052-335/+790
| | | | | | | | release.
* | Merge pull request #493 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-05-051-1/+1
|\ \ | |/ |/| | | | | * commit '6d0d9d46dab559c04bba0b8810a3e0630ce44ad2': Fix typo in name of ddl file in command
| * Fix typo in name of ddl file in commandAllen Byrne2017-05-051-1/+1
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* Merge pull request #490 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-05-051-1/+1
|\ | | | | | | | | * commit '9076e74d38f10d9d71a41ceeb118777468b6b530': Fix name to copy
| * Fix name to copyAllen Byrne2017-05-051-1/+1
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