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* Fix for the two issues reported in HDFFV-10051:Vailin Choi2017-05-073-3/+130
| | | | | | | | | | | (1) Repeated open/close of a compact dataset fails due to the increment of ndims in the dataset structure for every open. --This is done only for chunked dataset via H5D__chunk_set_sizes(). (2) layout "dirty" flag for a compact dataset is not reset properly after flushing the data at dataset close. --Reset the "dirty" flag before flushing the message to the object header via H5O_msg_write(). Tested on moohan, kituo, platypus, ostrich, osx1010test, quail, emu.
* Merge pull request #491 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to developLarry Knox2017-05-052-336/+791
|\ | | | | | | | | | | * commit '28f4873e7fc93de865c3e180f09d7221569f64ff': Update one missed version string. Update release_docs/HISTORY-1_10.txt and RELEASE.txt after HDF5 1.10.1 release.
| * Update one missed version string.lrknox2017-05-051-1/+1
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| * Update release_docs/HISTORY-1_10.txt and RELEASE.txt after HDF5 1.10.1lrknox2017-05-052-335/+790
| | | | | | | | release.
* | Merge pull request #493 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-05-051-1/+1
|\ \ | |/ |/| | | | | * commit '6d0d9d46dab559c04bba0b8810a3e0630ce44ad2': Fix typo in name of ddl file in command
| * Fix typo in name of ddl file in commandAllen Byrne2017-05-051-1/+1
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* Merge pull request #490 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-05-051-1/+1
|\ | | | | | | | | * commit '9076e74d38f10d9d71a41ceeb118777468b6b530': Fix name to copy
| * Fix name to copyAllen Byrne2017-05-051-1/+1
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* Merge pull request #488 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-05-041-1/+1
|\ | | | | | | | | * commit 'c90f72a0d44ab53d16e0c7979363565dff30cf24': Correct name of file to copy
| * Correct name of file to copyAllen Byrne2017-05-041-1/+1
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* Merge pull request #487 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-05-043-34/+35
|\ | | | | | | | | * commit '412f68103ecc9e75a895dd057ad28d0e456f3a58': Use correct var types for data
| * Use correct var types for dataAllen Byrne2017-05-043-34/+35
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* Merge pull request #486 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-05-0417-367/+421
|\ | | | | | | | | | | | | * commit '006e56802196ee6a43261aec7027815ad24ad3db': Remove duplicate defines Add test file to list and fix test typo Make test scripts fail if result files are created
| * Remove duplicate definesAllen Byrne2017-05-042-18/+0
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| * Add test file to list and fix test typoAllen Byrne2017-05-021-1/+3
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| * Make test scripts fail if result files are createdAllen Byrne2017-05-0215-348/+418
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* Merge pull request #482 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to developLarry Knox2017-05-025-10/+10
|\ | | | | | | | | * commit 'be49a9422654ac9eec07ffe3599b4a7f7561cdb6': Comment out install-exec-hooks to remove libdynlib* files. Allen did the same for hdf5_1_10 and hdf5_1_10_1 because the hooks don't reliably work. In the develop branch they are causing make install failures because the autotools' install commands sometimes attempt to chmod these files when they no longer exist.
| * Comment out install-exec-hooks to remove libdynlib* files. Allen didlrknox2017-04-285-10/+10
|/ | | | | | | the same for hdf5_1_10 and hdf5_1_10_1 because the hooks don't reliably work. In the develop branch they are causing make install failures because the autotools' install commands sometimes attempt to chmod these files when they no longer exist.
* Merge pull request #481 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developLarry Knox2017-04-281-1/+3
|\ | | | | | | | | * commit '0bf41bec5aab468036f32afb287f224d266edf7a': Add extra files to be copied
| * Add extra files to be copiedAllen Byrne2017-04-271-1/+3
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* Merge pull request #480 in HDFFV/hdf5 from ↵Dana Robinson2017-04-274-7/+2
|\ | | | | | | | | | | | | ~DEROBINS/hdf5_der:cmake_header_create to develop * commit '80d57c242a15edd983673e9bad4e966c72975289': Set the HDF5_GENERATE_HEADERS CMake option to default to ON and removed the option from the CMake cache init files.
| * Set the HDF5_GENERATE_HEADERS CMake option to default to ON and removedDana Robinson2017-04-274-7/+2
|/ | | | | | the option from the CMake cache init files. Fixes HDFFV-10184
* Merge pull request #478 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developLarry Knox2017-04-271-1/+2
|\ | | | | | | | | * commit 'a302f508a51ba9fe109aaacda24601d5c458fe8d': Change position of declaration to top of block
| * Change position of declaration to top of blockAllen Byrne2017-04-271-1/+2
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* Merge pull request #473 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to ↵Vailin Choi2017-04-269-159/+899
|\ | | | | | | | | | | | | | | develop * commit 'bacb45b38ae8513024baf2dfe08c8918625489e2': Modifications based on pull request review. Made couple changes based on the review comments. Incorporate patch from GE Healthcare (HDFFV-9934) This is the same patch that had already been integrated to 1.8 branch (pull request #387). Tested on moohan, ostrich, platypus, emu, osx1010test, quail, kituo, mayll.
| * Modifications based on pull request review.Vailin Choi2017-04-262-3/+3
| | | | | | | | Made couple changes based on the review comments.
| * Incorporate patch from GE Healthcare (HDFFV-9934)Vailin Choi2017-04-259-158/+898
|/ | | | | This is the same patch that had already been integrated to 1.8 branch (pull request #387). Tested on moohan, ostrich, platypus, emu, osx1010test, quail, kituo, mayll.
* Merge pull request #470 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-04-251-83/+3
|\ | | | | | | | | * commit '2420df5a85c64a20d98165c5b8c891899b31da83': HDFFV-10170 revert entire change
| * HDFFV-10170 revert entire changeAllen Byrne2017-04-251-83/+3
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* Merge pull request #468 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to developLarry Knox2017-04-251531-8774/+22224
|\ | | | | | | | | | | * commit '89fbe00dec8187305b518d91c3ddb7d910665f79': Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to hdf5_1_10 Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes.
| * Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2017-04-251530-8768/+22220
| | | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit '54957d37f5aa73912763dbb6e308555e863c43f4': Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes. Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh. Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1 Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
| * Commit copyright header change for src/H5PLpkg.c which was added after ↵lrknox2017-04-251-6/+4
|/ | | | running script to make changes.
* Merge pull request #464 in HDFFV/hdf5 from ↵Dana Robinson2017-04-252-30/+48
|\ | | | | | | | | | | | | ~DEROBINS/hdf5_der:bin_trace_complain to develop * commit 'b1a5ba405393da68028cf1c8b159a3abb51d2187': Updated bin/trace to emit errors and reordered autogen.sh processing so that script failures leave the library in a non-compilable state, making it harder to ignore errors.
| * Updated bin/trace to emit errors and reordered autogen.sh processingDana Robinson2017-04-252-30/+48
|/ | | | | so that script failures leave the library in a non-compilable state, making it harder to ignore errors.
* Merge pull request #457 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to developAllen Byrne2017-04-247-43/+62
|\ | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '0fb5ce7ad50664f800ffe7e107e0fb0f90f66e12': Correct name of native function Fix javadoc Fix typo Signature change requires a ptr Change H5PLsize() signature Revert HDFFV-9655 Changed signature of H5PLgetsize Revert HDFFV-9655 by disabling test and not using new function. Fix path to actual executable location Windows ahs one more directory level
| * Correct name of native functionAllen Byrne2017-04-241-1/+1
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| * Fix javadocAllen Byrne2017-04-241-2/+4
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| * Fix typoAllen Byrne2017-04-241-1/+1
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| * Signature change requires a ptrAllen Byrne2017-04-241-8/+8
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| * Change H5PLsize() signatureAllen Byrne2017-04-241-8/+15
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| * Revert HDFFV-9655Allen Byrne2017-04-241-5/+9
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| * Changed signature of H5PLgetsizeAllen Byrne2017-04-241-6/+4
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| * Revert HDFFV-9655 by disabling test and not using new function.Allen Byrne2017-04-243-19/+24
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| * Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2017-04-2424-867/+508
| |\ | |/ |/| | | | | * commit '2deb953dbbde17712723529c4bca6a2bf3eedf6b': Fix for HDFFV-10166 h5watch tests fail randomly to match expected output files (1) Re-structure tests to do one "extend" action at a time (2) Re-try test till max limit before final failure
* | Merge pull request #453 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to ↵Vailin Choi2017-04-2424-867/+508
|\ \ | | | | | | | | | | | | | | | | | | develop * commit 'e9b289a3d1d031f594e8c5421144ac44f3d44bcb': Fix for HDFFV-10166 h5watch tests fail randomly to match expected output files (1) Re-structure tests to do one "extend" action at a time (2) Re-try test till max limit before final failure
| * | Fix for HDFFV-10166 h5watch tests fail randomly to match expected output filesVailin Choi2017-04-2124-867/+508
| | | | | | | | | | | | | | | (1) Re-structure tests to do one "extend" action at a time (2) Re-try test till max limit before final failure
| | * Fix path to actual executable locationAllen Byrne2017-04-241-12/+13
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| | * Windows ahs one more directory levelAllen Byrne2017-04-241-1/+3
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* | Merge pull request #454 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to developLarry Knox2017-04-221-11/+11
|\ \ | |/ |/| | | | | * commit 'ebb7bc7fadb86c48869439ea9137f1dfc1e1f158': Comment out failing plugin test until fixed (unexpected .libs in plugin test directory path with '@').
| * Comment out failing plugin test until fixed (unexpected .libs in plugin test ↵lrknox2017-04-221-11/+11
|/ | | | directory path with '@').
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