| Commit message (Collapse) | Author | Age | Files | Lines |
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H5_ff_F90/F03.lo and H5_ff.lo
to resolve failures when building HDF5.lo and HDF5mpio.lo.
Tested: jam (gcc, mpi) using both: make HDF5.lo and make HDF5mpio.lo
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for HDFFV-7693. (r21396)
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HDFFV-7693 - h5diff produces different behavior between versions: 1.8.3 and 1.8.6
Description:
There were two issues on this.
One was not displaying all the comparable objects if non-comparable
object/attribute exist and compared before comparables ones. This issue
occurred after 1.8.4 release. This is the issue from user.
The other issue was not displaying all the comparable attributes,
if non-comparable object/attribute exist and compared ahead. This issue
were exist even before 1.8.4 release. So it's possible some attribute
comparison may have not displayed correctly in the past, if non-comparable
data were exist in common object.
Fixed h5diff to display all the comparable object and attribute regardless
of non-comparables.
Tested:
jam (linux32-LE), koala (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Cmake (jam, Windows)
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entry is suppose to add to the top not the bottom.
Relate to fix for HDFFV-5932 - h5repack.
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dimension scales.
Tested:
jam (linux32-LE), koala (linux64-LE), heiwa (linuxppc64-BE)
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causes problem on Windows.
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h5repack for 1) references, 2) ARRAY of references, 3) VLEN of references, and 4) COMPOUND of references.
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know it. So I used H5_VMS to have a different way ("%hd") to print it.
Tested on jam. Not tested on VMS yet. Simple change.
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to the RM documentation's standards.
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defines H5_HAVE_WIN32_API and H5_HAVE_VISUAL_STUDIO defines to use. These can be properly set during configurration.
Tested: windows and local linux - reviewed internally
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type to c_long to match the unsigned long, via standard:
F2003, Note 15.9
"The C international standard specifies that the representations for
nonnegative signed integers ar ethe same as the corresponding
values for signed integers. Because Fortran does not provide direct
support for unsigned kinds of integers, the ISO_C_BINDING module
does not make accessible named constants for their kind type
parameter values. Instead, a user can use the signed kinds of
integers to interoperate with the unsigned types and all their
qualified versions as well...."
Tested: (jam, intel)
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HDFFV-7712 - h5diff: segfault over combinations of complex container types (compound, array, vlen)
Description:
- Fixed segfault over dataset with container types (array,lven) with multiple nested compound types. (ex: compound->array->compound, compound->vlen->compound)
Tested:
jam (linux32-LE), koala (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Cmake (jam)
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CLANG compiler's complaints.
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tempint = (tempint >> packed_data_offset) & packed_data_mask;
The right shift may cause undefined behavior if PACKED_DATA_OFFSET is
32-bit or more. For every kind of native integers, I changed the code
to make it zero if PACKED_DATA_OFFSET is greater than or equal to the
size of integer.
Tested on Mac OS Lion with CLANG compiler and jam, koala, and linew.
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part of HDFFV-7687 review and commit. File already used HD prefix on stat function.
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testing needs
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testing needs
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-ftrapv discovered several problems in the test suite. One of
them is in the INIT_INTEGER macro definition in dt_arith.c. It complained about line 150 where it tried to subtract 1 from
the negative minimal value of "int", causing it to overflow (or underflow). So I revised the code to avoid it.
Tested on jam, koala, linew, and Mac OS Lion with CLANG compiler.
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fortran (using F2003), for both 1D and 2D array of vl strings.
Tested: jam (pgi, gfortran 4.5, ifort)
linew (12.3 beta)
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specified and a compiler is not on an approved list of compilers that support f2003, then configure will now return an error and stop.
Tested: jam
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where necessary
reviewed
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proper quoting this time). Tested on jam (w/ gfortran 4.5.3 for fortran 2003), talwit and linew.
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changed the INTEGER type getting passed the verify* programs in the test programs. Fixes problems with Sun compilers 12.3 beta with the -m64 flag.
Tested: linew( 12.3 beta)
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Changed the minimum required version for the pgi compiler to be 11.7, 11.3 version fails in tH5P_F03.f90 when the option -fast is used (i.e. production mode)
f_ptr = C_LOC(rd_c)
CALL H5Pget_fill_value_f(dcpl, comp_type_id, f_ptr, error)
it returns all zeros, version 11.7 does not have this problem.
tested: jam koala (pgi, 11.3 and 11.7)
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change that he backed out. This matches the previous version which passed the last passing hourly test.
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fortran/examples and fixed an autotools warning from the Fortran 2003 configure.in changes. Tested on jam (minor changes).
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parameter, which it can't process. This allows the correct H5TRACE8 trace function to be added to H5Epush2. Tested on jam (simple change).
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Tested: local linux
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is first.
Also preface all tests with H5REPACK.
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Removed duplicate h5p, h5a, and h5d, double precision functions in _F90 and _F03 files
that are already defined in H5_DBLE_InterfaceInclude
Tested: jam (gcc 4.5, intel 12.0)
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Added to the *.def the module's appended name "provisional" for those functions
that were split between the _F90 and _F03 files.
Windows
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descriptions to correct section.
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Not tested yet.
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Not tested yet.
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1) --enable-fortran2003 will enable only F2003 features. It is not a replacement for --enable-fortran. If compiler is not F2003 compliant configure should fail.
2) if --enable-fortran2003 is specified with out --enable-fortran configure fails
3) Configure help indicates that --enable-fortran2003 is in addition to --enable-fortran
Updated the version checks of different compilers.
Tested: jam (gcc 4.1 4.6, intel 10.1 11.1 12.0, pgi)
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entry in hdf5_fortrandll.dif
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