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* Align contents of CMake and autotools testfile cleanup lists.Quincey Koziol2020-05-042-89/+53
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* Avoid allocating a chunk index for datasets with 0-sized dimensions, untilQuincey Koziol2020-05-044-13/+209
| | | | the dataset is extended.
* Merge pull request #2546 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_12 to ↵Allen Byrne2020-04-2713-108/+102
|\ | | | | | | | | | | | | hdf5_1_12 * commit '38e923b85367b9e1428a3d284cb3c09c9fe8a108': OESS-65 replace szip with aec library
| * OESS-65 replace szip with aec libraryAllen Byrne2020-04-2713-108/+102
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* Merge pull request #2528 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_12 to ↵hdftest2020-04-2717-117/+196
|\ | | | | | | | | | | | | | | | | | | | | hdf5_1_12 * commit '8a4905b9d329b582b04d1cc2705d9e367f4dd20b': Restrict errors to gcc 4.8 and above. Merge pull request #2537 in HDFFV/hdf5 from ~DYOUNG/werror:fix-werrors to develop Fix NoFilter build TRILAB-244 separate CXX warnings and errors from C Don't add general warnings flags for unsupported old versions of gcc and g++ (older than gcc/g++ 4.2). Correct gnu-cxxflags to determine warnings flags to be added based on C++ compiler version instead of C compiler version.
| * Restrict errors to gcc 4.8 and above.Allen Byrne2020-04-262-25/+22
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| * Merge pull request #2537 in HDFFV/hdf5 from ~DYOUNG/werror:fix-werrors to ↵David Young2020-04-262-6/+3
| | | | | | | | | | | | | | | | | | develop * commit 'd16eb45d536bd13ca3cf1b0bdc76c58d95d13f17': For compatibility with non-C99 Visual Studio versions, use "%" PRIuMAX instead of "%ju". Fix `test/swmr_sparse_reader.c:118:77: error: cast from pointer to integer of different size [-Werror=pointer-to-int-cast]` and `test/snapshots-hdf5/current/test/swmr_sparse_reader.c:129:100: error: cast from pointer to integer of different size [-Werror=pointer-to-int-cast]`. Fix `src/H5FDdirect.c:1346:5: error: ISO C90 forbids mixed declarations and code [-Werror=declaration-after-statement]`.
| * Fix NoFilter buildAllen Byrne2020-04-261-1/+1
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| * TRILAB-244 separate CXX warnings and errors from CAllen Byrne2020-04-2613-56/+129
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| * Don't add general warnings flags for unsupported old versions of gcc andLarry Knox2020-04-214-41/+53
| | | | | | | | | | | | g++ (older than gcc/g++ 4.2). Correct gnu-cxxflags to determine warnings flags to be added based on C++ compiler version instead of C compiler version.
* | Merge pull request #2545 in HDFFV/hdf5 from ~HDFTEST/hdf5_hft:hdf5_1_12 to ↵hdftest2020-04-276-7/+7
|\ \ | |/ |/| | | | | | | | | hdf5_1_12 * commit 'ee86b05d9841dbfb14335f60af37d54bf66a1138': Snapshot version 1.12 release 1 (snap0) Update version to 1.12.1-1
| * Snapshot version 1.12 release 1 (snap0)hdftest2020-04-276-7/+7
|/ | | | Update version to 1.12.1-1
* Merge pull request #2512 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_12 to ↵Allen Byrne2020-04-141-42/+47
|\ | | | | | | | | | | | | hdf5_1_12 * commit 'd5b10a7d0aa300742137fba8157c54d92a594c61': TRILAB-192 version of std=f2008 special check
| * TRILAB-192 version of std=f2008 special checkAllen Byrne2020-04-141-42/+47
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* | Merge pull request #2497 in HDFFV/hdf5 from ↵Vailin Choi2020-04-141-5/+3
|\ \ | |/ |/| | | | | | | | | | | ~VCHOI/my_third_fork:bugfix/112_dtype_close_on_error to hdf5_1_12 * commit '365f08e555e7e92f04b095ccfb3dae09b27fd0ad': Fix according to PR feedback. Fix error in previous merge: should use NULL instead of FAIL.
| * Fix according to PR feedback.vchoi2020-04-071-1/+1
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| * Fix error in previous merge: should use NULL instead of FAIL.vchoi2020-04-071-4/+2
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| * Merge pull request #30 in ~VCHOI/my_third_fork from hdf5_1_12 to ↵Vailin Choi2020-04-070-0/+0
| |\ | | | | | | | | | | | | | | | bugfix/112_dtype_close_on_error * commit 'db3f89ce9dc7eae17cb15d39e402112c3fbd2955':
* | \ Merge pull request #2480 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_12 to ↵Allen Byrne2020-04-13109-2211/+2660
|\ \ \ | |_|/ |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | hdf5_1_12 * commit '13bba40029b2ff5f64600b497cdce94f8dba0bcc': Fix shadowed type TRILAB-192 - cleanup edits and match CMake CXX to autotools Add missing " and update function calls incorrectly namedload_gcc_arguments. Commit changes to gnu-cxxflags to remove unmatched " and to gnu-fflags to not add C warnings flags to H5_FCFLAGS. TRILAB-192 update LTparse files TRILAB-192 - merge changes from develop Update release note for CMake warnings Correct extra flags TRILAB-192 merging warnings changes from develop TRILAB-24 use CheckStructHasMember CMake module
| * | Fix shadowed typeAllen Byrne2020-04-131-3/+3
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| * | TRILAB-192 - cleanup edits and match CMake CXX to autotoolsAllen Byrne2020-04-135-88/+200
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| * | Add missing " and update function calls incorrectlyLarry Knox2020-04-123-27/+27
| | | | | | | | | | | | | | | | | | namedload_gcc_arguments. Commit changes to gnu-cxxflags to remove unmatched " and to gnu-fflags to not add C warnings flags to H5_FCFLAGS.
| * | TRILAB-192 update LTparse filesAllen Byrne2020-04-073-663/+821
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| * | TRILAB-192 - merge changes from developAllen Byrne2020-04-0747-1259/+1047
| | | | | | | | | | | | Single source, config files, for warnings for both autotools and CMake. Update CMake libraries, tools, tests to use correct flags.
| * | Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_12)Allen Byrne2020-04-052-350/+400
| |\ \ | |/ / |/| | | | | | | | * commit 'db3f89ce9dc7eae17cb15d39e402112c3fbd2955': Merge pull request #2461 in HDFFV/hdf5 from ~VCHOI/my_third_fork:bugfix/dtype_close_on_error to develop
* | | Merge pull request #2488 in HDFFV/hdf5 from ↵Vailin Choi2020-04-032-350/+400
|\ \ \ | | |/ | |/| | | | | | | | | | | | | ~VCHOI/my_third_fork:bugfix/112_dtype_close_on_error to hdf5_1_12 * commit 'b4d06a7e80d62b93e64abd44425f90ec1e15df81': Merge pull request #2461 in HDFFV/hdf5 from ~VCHOI/my_third_fork:bugfix/dtype_close_on_error to develop
| * | Merge pull request #2461 in HDFFV/hdf5 from ↵Vailin Choi2020-04-022-350/+400
|/ / | | | | | | | | | | | | ~VCHOI/my_third_fork:bugfix/dtype_close_on_error to develop * commit 'afdcac28b85d690eebc80ab568fa5266081baaaa': A fix in the cleaning up code for datatype when datatype initialization via H5D__init_type() fails. This is triggered by the tests for revised references when the libver bounds setting does not allow version 4 datatype message to be created. The test failure is abort core dumped. This is due to the datatype initialization fails before the datatype ID is registered. The datatype cleanup code should provide for the above situation. The code to fix the problem is the same as what is done in H5D__open_oid().
| * Update release note for CMake warningsAllen Byrne2020-04-031-0/+2
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| * Correct extra flagsAllen Byrne2020-04-011-2/+2
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| * TRILAB-192 merging warnings changes from developAllen Byrne2020-03-3067-243/+701
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| * Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_12)Allen Byrne2020-03-2910-211/+585
| |\ | |/ |/| | | | | | | | | | | | | | | * commit '16b909a7488d8288206dd0bb7cf9ef7036d7f543': Update release notes about H5get_alloc_stats() and H5get_free_list_sizes(). Was checking the wrong compiler macro. Correct failure when allocation tracking are disabled. Remove VCS merge conflict Revise API for H5get_alloc_stats() to take a struct instead of separate values. Add routines to query the library's free list sizes and allocation stats.
* | Merge pull request #2468 in HDFFV/hdf5 from alloc_stats_1_12 to hdf5_1_12Quincey Koziol2020-03-2810-211/+585
|\ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '0f92c0e908454bb025361060d89de805e4829302': Update release notes about H5get_alloc_stats() and H5get_free_list_sizes(). Was checking the wrong compiler macro. Correct failure when allocation tracking are disabled. Remove VCS merge conflict Revise API for H5get_alloc_stats() to take a struct instead of separate values. Add routines to query the library's free list sizes and allocation stats.
| * | Update release notes about H5get_alloc_stats() and H5get_free_list_sizes().Quincey Koziol2020-03-251-0/+3
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| * | Was checking the wrong compiler macro.Quincey Koziol2020-03-251-1/+1
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| * | Correct failure when allocation tracking are disabled.Quincey Koziol2020-03-241-0/+12
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| * | Remove VCS merge conflictQuincey Koziol2020-03-241-6/+0
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| * | Revise API for H5get_alloc_stats() to take a struct instead of separate values.Quincey Koziol2020-03-236-99/+64
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| * | Add routines to query the library's free list sizes and allocation stats.Quincey Koziol2020-03-239-211/+611
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| * TRILAB-24 use CheckStructHasMember CMake moduleAllen Byrne2020-03-273-88/+19
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* Merge pull request #2454 in HDFFV/hdf5 from ↵Vailin Choi2020-03-195-5/+23
|\ | | | | | | | | | | | | ~VCHOI/my_third_fork:bugfix/v112_seg_fault_sel_compat to hdf5_1_12 * commit '3b2db5eb19594fa44357e63e36f3b294fbae463d': Merge pull request #2451 in HDFFV/hdf5 from ~VCHOI/my_third_fork:bugfix/develop_seg_fault_sel_compat to develop
| * Merge pull request #2451 in HDFFV/hdf5 from ↵Vailin Choi2020-03-165-5/+23
|/ | | | | | | ~VCHOI/my_third_fork:bugfix/develop_seg_fault_sel_compat to develop * commit '81b1ed4e1724b8a6a731ab2b8fb03234a8b49d15': Fix issues when deserializing point/all/none selection with version beyond the library's supported version: (1) Verify the decoded version before proceeding further with deserialization (2) Close the dataspace if errors occurred after opening the dataspace
* Merge pull request #2448 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_12 to ↵Larry Knox2020-03-121-1/+1
|\ | | | | | | | | | | | | hdf5_1_12 * commit 'fe1f4d031e3aeb2702639c2b7e11f76811309f48': Add \d to list of characters allowed after - in versions.
| * Add \d to list of characters allowed after - in versions.Larry Knox2020-03-121-1/+1
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* Merge pull request #2437 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_12 to ↵Allen Byrne2020-03-041-2/+2
|\ | | | | | | | | | | | | hdf5_1_12 * commit 'e3c555b9034a63d8ae6e079d44b44552e33a0161': Remove system command from valgrind reports
| * Remove system command from valgrind reportsAllen Byrne2020-03-021-2/+2
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* Merge pull request #2425 in HDFFV/hdf5 from ~JAKE.SMITH/hdf5:hdf5_1_12 to ↵Jake Smith2020-03-011-2/+2
|\ | | | | | | | | | | | | | | hdf5_1_12 * commit '46f0de82c7674a28b08e4da3b0149c793b762203': Fix improper signing key null check. (HDFFV-11015) Add updates from develop, PR 1958.
| * Fix improper signing key null check. (HDFFV-11015)Jacob Smith2020-02-281-2/+2
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| * Merge branch 'hdf5_1_12' of ↵Jacob Smith2019-10-11157-5762/+15516
| |\ | | | | | | | | | https://bitbucket.hdfgroup.org/scm/~jake.smith/hdf5 into hdf5_1_12
| * | Add updates from develop, PR 1958.Jacob Smith2019-10-111-24/+65
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* | | Merge pull request #2429 in HDFFV/hdf5 from ~KMU/hdf5:bugfix/type_cast_12 to ↵Kimmy Mu2020-02-291-2/+2
|\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | hdf5_1_12 * commit '7e6fd7e4adf70a40deb0d90e3e9b55d663832a43': revert type cast
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