| Commit message (Collapse) | Author | Age | Files | Lines |
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Purpose:
Bugfix -- Fixes #756.
Description:
Section IV.A.3 -- Corrected datatype description.
Platforms tested:
IE 5
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Port
Description:
Brought forward the changes (timing debug prints) from the 1.4
branch.
Platforms tested:
Linux
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Purpose:
Bugfix -- Fixes #757.
Description:
h5t{get/set}_size_f
Corrected SIZE parameter datatype to INTEGER(SIZE_T).
Platforms tested:
IE 5
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Code cleanup
Description:
Remove an extraneous data structure for tracking the location of a
hyperslab iterator when walking through regular hyperslab selections.
Platforms tested:
FreeBSD 4.5 (sleipnir)
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Purpose:
minor bugs fixed
Description:
Typos in H5Fpkg.h and H5TB.c
Solution:
Platforms tested:
linux 2.2.18
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Purpose:
updated some comments regarding Code Warrior , removed other debugging comments
Platforms tested:
w2000
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Purpose:
Bug#670 fix
Description:
Added tests to use overloaded subroutines.
Platforms tested:
Windows, Solaris 2.7, IRIX64-6.5
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Purpose:
Bug#670 fix
Description:
dims parameter to the h5dwrite_f, h5dread_f, h5awrite_f and h5aread_f
subroutines was declared as INTEGER array of size 7 (max number of dimensions
in Fortran). Users could not use the same buffer dims as an argument to
the h5screate_simple_f subroutine since it should be an array of size = RANK
and type INTEGER(HSIZE_T).
Solution:
Overload subroutines with dims parameter to be assumed size array of
INTEGER(HSIZE_T) type for backward compatibility.
Subroutine with the INTEGER dims argument should be depricated in 1.6 release
Platforms tested:
Windows, Solaris2.7, IRIX64-6.5
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Purpose:
1 new function; 3 revised functions; 2 bugfixes; copy edits
Solution:
H5Tget_member_index: Added this new function.
H5Tget_member_name: Revised, based on lessons learned with
H5Tget_member_index.
H5Tget_nmembers: Revised to indicate that function works for both
compound and enumeration datatypes.
--> Fixes Bug# 747.
Cross-listed H5Tget_nmembers, H5Tget_member_index, and
H5Tget_member_name under both compound and enum datatypes,
as they work for both.
H5Tset_tag: Corrected tag description (it is descriptive, uniqueness
is not required).
Corrected several spelling errors.
--> Partially fixes Bug# 760 (though just for this file *sigh*).
Platforms tested:
IE 5
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Description:
Minor copy edits.
Platforms tested:
IE 5
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Purpose:
Bugfix -- fixes #751
Description:
Elaborated on 'ref' parameter type.
Platforms tested:
IE 5
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Purpose:
added more tests to the H5set_extent function
Description:
there was a bug in the H5S_select_fill call when the fill value was not defined
added 2 more set of tests that call H5set_extent without the fill value being defined
there are now 4 sets of tests:
Test H5Dset_extent with chunks on the raw data cache, with and without fill value
Test H5Dset_extent with chunks written to file (b-tree routines), with and without fill value
Platforms tested:
w2000
linux
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Bug Fix
Description:
Add TRACE8 and TRACE9 macros
Platforms tested:
FreeBSD 4.5 (sleipnir)
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Code cleanup
Description:
Update the API tracing information
Platforms tested:
Linux 2.2 (eirene) with gcc 2.95.2 and Solaris 2.6 (baldric) with gcc 2.8.1
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Configure cleanup
Description:
Neaten up file a bit more...
Platforms tested:
Linux 2.2 (eirene) with gcc 2.95.2 and Solaris 2.6 (baldric) with gcc 2.8.1
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Update API tracing information
Platforms tested:
Linux 2.2 (eirene)
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Purpose:
user reported a bug on h5 to gif tool
Description:
h5 to gif did not read an HDF5 image correctly
Solution:
updated the program so that it reads the updated HDF5 image format to the latest specification
the debug version of MSVC was giving a failure on the write of the GIF file,
regarding the GIF file pointer
this write error is eliminated declaring that pointer a global variable
there is still an applicattion error on the exit of the program, only on the debug version of MSVC
Platforms tested:
w2000
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Configure cleanup
Description:
Fine-tune the gcc version checks a bit more...
Platforms tested:
FreeBSD 4.5 (sleipnir) with gcc 2.95.3 and gcc 3.1 (prerelease) and
Solaris 2.6 (baldric) with gcc 2.8.1
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Configuration improvements
Description:
Added more warning flags to gcc builds, especially with gcc 3+. Also, added
the -Wno-long-long flag to gcc builds to turn off the annoying "long long"
warnings.
Platforms tested:
FreeBSD 4.5 (sleipnir) with gcc 2.95.3 and gcc 3.1 (prerelease)
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Purpose:
remove all_withhdf4.zip from the file list
Description:
Solution:
Platforms tested:
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Purpose:
HDF4 related tools were moved out of HDF5 CVS tree, so we retire all_withhdf4.zip
Description:
Solution:
Platforms tested:
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Purpose:
1. update the transition from "MACRO_NAME" to "H5_MACRO_NAME" on windows platforms.
2. make gethostname work on windows
Description:
1. All constant defined at H5config.h will be renamed and moved to H5pubconf.h.
SInce no autoconf on windows, H5pubconf.h has to be manually tuned to build HDF5 library.
2. Have to use WS2_startup and WS2_end to make gethostname work. Also change project files to
erase warnings.
Solution:
Platforms tested:
windows 2000
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Purpose:
turn on daylight feature on windows
Description:
currently we have to hard code daylight feature of windows to make it pass mtime test.
Solution:
Platforms tested:
linux 2.2.18
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Purpose:
Bug Fix
Description:
Using "grp1", "grp2" variable names conflicts Windows' internal variable
definition.
Solution:
Rename them.
Platforms tested:
Linux 2.2
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Purpose:
bug fix
Description:
Had an #ifdef HAVE_XXX in the header file HDFIOTrace.h
Solution:
Changed the condition to H5_HAVE_XXX
Platforms tested:
Origin 2000 64 bit
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Bug Fix
Description:
Corrected int vs. unsigned short error that only showed up on big-endian
machines.
Also, add more testing to verify that the coordinates reported for each
element iterated through with H5Diterate are correct.
Platforms tested:
FreeBSD 4.5 (sleipnir)
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Bug Fix
Description:
Correct coordinates were not computed for iteration through irregular
hyperslab selection (although the points in the buffer that were selected
were correct).
Solution:
Add another array to track selection offset adjusted coordinates in the
selection.
Platforms tested:
FreeBSD 4.5 (sleipnir)
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Bug Fix
Description:
Selection offsets were not being used correctly when iterating through
all hyperslabs selections and point selections.
Solution:
Use the selection offset appropriately.
Platforms tested:
FreeBSD 4.5 (sleipnir)
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Update
Description:
Changed the description of the help message so that the --hdf5,
--mpio, --raw flags better say what they do.
Platforms tested:
Linux
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Update
Description:
Changed so that the Fortran and C++ configures are named "HDF5
Fortran" and "HDF5 C++" resp. instead of just "HDF5.
Solution:
Add an extra parameter to the subroutine which generates the new
configure.in files.
Platforms tested:
Linux
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Migrate from configure macros of XYZ_ABC to H5_XYZ_ABC
Description:
configure generates many macros definitions on the fly and
were stored in src/H5config.h which is included by H5public.h.
But other software that uses hdf5 may also run their own configure.
There can be a clash in macro name space. We decided awhile ago
to prepend all generated macros with "H5_" to avoid conflicts.
The process has started and this commit completes it (at least attempt
to).
Solution:
Many macros symbols (e.g. SIZEOF_xxx and HAVE_xxx were changed to
H5_SIZEOF_xxx and H5_HAVE_xxx). Then H5private.h no longer includes
H5config.h. This cuts H5config.h away from HDF5 source code.
Pending issues:
The module of fortran and pablo are to be resolved in a different
commit.
Platforms tested:
eirene (parallel), arabica (solaris 7 --enable-fortran, --enable-cxx)
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Purpose:
New feature
Description:
Allow H5Glink and H5Gmove to handle links across different locations.
Solution:
Added H5Glink2 and H5Gmove2 functions with new parameter of destination
location.
Platforms tested:
Linux 2.2(eirene)
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Bug fix
Description:
Move iterator initialization in H5D_read & H5D_write before any errors can
occur.
Platforms tested:
FreeBSD 4.5 (sleipnir)
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Bug Fix.
Description:
When the fill value for a dataset is not set, the size is set to zero,
causing problems with filling unused areas in previously defined chunks
(i.e. when the dataset shrinks in size)
Solution:
Use the size of the elements in the dataset directly, instead of relying on
the size of the fill value (which must be the same size).
Platforms tested:
FreeBSD 4.5 (sleipnir)
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Description:
The default constructor of H5File was missing. It's now added.
Platforms:
SunOS 5.7 (arabica)
Linux 6.2 (eirene)
IRIX 6.5.11 (modi4)
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Purpose:
Maintenance
Description:
Changed code to use H5_HAVE_MPI_MULTI_LANG_* definitions and
H5pubconf_fortran.h include file.
Solution:
Platforms tested:
Let's daily tests do this work. I have to leave now.
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Update
Description:
Added h5pubconf_fortran.h as a public header file for the Fortran
wrappers...
Platforms tested:
Linux
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Update
Description:
Added a conversion of the H5config_fortran.h file to
H5pubconf_fortran.h so as to keep with the HDF5 format of using H5_
as a prefix for HAVE_* macros.
Platforms tested:
Linux
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Update
Description:
Updated the h5vers script to automatically update the configure.in
files so that they reflect the correct version in the AC_INIT line.
Platforms tested:
Linux
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Purpose:
Bug fix
Description:
For some unknown to myself reason I used 32-bit integer for INTEGER(HSIZE_T)
on Solaris platforms when 64-bit integers are available for both C and Fortran.
Solution:
Use long long type to describe h(s)size_t_f types
Platforms tested:
Solaris 2.7 ans 2.6
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Purpose:
Bug fix
Description:
For some unknown to myself reason I used 32-bit integer for INTEGER(HSIZE_T)
on Solaris platforms when 64-bit integers are available for both C and Fortran.
Solution:
Use the proper KIND argument to define INTEGER(HSIZE_T)
Platforms tested:
Solaris 2.7 ans 2.6
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Code cleanup
Description:
Remove more debugging printf's that were ifdef'd out.
Platforms tested:
FreeBSD 4.5 (sleipnir)
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Code cleanup
Description:
Previously, the I/O pipeline (pline), external file list (efl) and fill-
value (fill) structs were passed down the raw data function call chain,
even into and/or through functions which didn't use them. Since all three
of these pieces of information are available from the dataset creation
property list, just pass the dataset creation property list down the
function call chain and query for the information needed in a particular
function.
Platforms tested:
FreeBSD 4.5 (sleipnir)
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Code cleanup
Description:
Previously, the I/O pipeline (pline), external file list (efl) and fill-
value (fill) structs were passed down the raw data function call chain,
even into and/or through functions which didn't use them. Since all three
of these pieces of information are available from the dataset creation
property list, just pass the dataset creation property list down the
function call chain and query for the information needed in a particular
function.
Platforms tested:
FreeBSD 4.5 (sleipnir)
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Bug fix
Description:
$(LT_RUN) was used to execute ./H5detect in src/Makefile.in.
$RUNTEST was set to $(LT_RUN) which was used to execute sequential
executable. $(LT_RUN) is "../libtool --mode=execute". But libtool
invokes some commands that are not supported in the Tflops machine.
That caused failures during the build and check processes.
Solution:
Upon investigation, there does not seem to be need to use $(LT_RUN)
any more. The "libtool --mode=link" now generates a "fake" executable
that is actually a command-script file that can regenerate the real
executable with dynamic libraries hooks setup properly.
Undo all those $LT_RUN substitute and let $RUNSERIAL execute those
sequential executables.
Platforms tested:
Eirene(serial), modi4(parallel)
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Code cleanup
Description:
Reduce gratuitous differences between H5D_write and H5D_read and also
remove distracting debugging printf's that were ifdef'd out.
Platforms tested:
FreeBSD 4.5 (sleipnir)
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Code tweak.
Description:
Allow the 'fill' parameter of H5S_select_fill to be NULL and allocate a
temporary buffer for it, if so.
Platforms tested:
FreeBSD 4.5 (sleipnir)
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Update
Description:
Updated ltmain.sh with the newest version from the 1.4.2 libtool. The
one I updated with earlier still had a few bugs in it, for some
reason. I got rid of the RPM version on my machine and used the
compiled source instead.
Platforms tested:
Linux
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Update
Description:
Remove the H5config_fortran.h file when doing a "make distclean" and
the like.
Platforms tested:
HP_UX
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