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* Clear RELEASE.txt and copy 1.14.2 RELEASE.txt to HISTORY-1.14.txt after (#3383)Larry Knox2023-08-152-171/+571
| | | 1.14.2 release.
* Correct cmake script (#3378)Allen Byrne2023-08-111-1/+1
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* Add a 1.14.3 column to the CVE matrix (#3371)Dana Robinson2023-08-101-69/+69
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* Add the 1.14 CVE matrix file (#3369)Dana Robinson2023-08-101-0/+75
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* set H5_PAC_C_MAX_REAL_PRECISION default to 0 when cross compiling (#3365)Larry Knox2023-08-091-11/+13
| | | with CMake to fix Fortran build failures.
* Work around a testphdf5 failure on Cray MPICH machines (#3361) (#3362)Larry Knox2023-08-082-7/+21
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* Merge Implementation of the mpio driver with selection I/O. (#3360)Larry Knox2023-08-0812-295/+4182
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* Merge 1 14 post0804 (#3359)Larry Knox2023-08-057-148/+302
| | | | | | | | * Fix for the bug exposed from running test/set_extent.c when selection I/O is enabled. (#3319) This is a fix from Neil. The test/set_extent.c is modified to test for selection I/O enabled. * test(parallel): verify FALSE case (#3356)
* Add Fortran H5ES module to deploy list (#3342)Allen Byrne2023-08-053-61/+48
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* Make h5dump spacing consistent when printing VLEN datatype (#3351) (#3352)jhendersonHDF2023-08-0412-26/+26
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* Merges from develop Aug 2-4 (#3354)Larry Knox2023-08-044-1/+39
| | | | | | | | | | | | | | | | | | | | * Fix CVE-2018-11202 (#3330) A malformed file could result in chunk index memory leaks. Under most conditions (i.e., when the --enable-using-memchecker option is NOT used), this would result in a small memory leak and and infinite loop and abort when shutting down the library. The infinite loop would be due to the "free list" package not being able to clear its resources so the library couldn't shut down. When the "using a memory checker" option is used, the free lists are disabled so there is just a memory leak with no abort on library shutdown. The chunk index resources are now correctly cleaned up when reading misparsed files and valgrind confirms no memory leaks. * Fix CVE-2018-13867 (#3336) * Windows runtime items go into the bin folder (#3320)
* Fix assertion failure in H5D__mpio_collective_filtered_vec_io (#3340) (#3350)jhendersonHDF2023-08-041-3/+3
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* Set version to 1.14.3-1. (#3343)Larry Knox2023-08-039-18/+18
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* Merge Fixes the last of the -Wextra-semi-stmt warnings #3326 (#3338)Allen Byrne2023-08-0363-1551/+1561
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* Merge Made HGOTO_ERROR a do-while loop changes from develop (#3334)Allen Byrne2023-08-03325-14849/+14583
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* Fix h5repack for variable-length datatyped datasets (#3331) (#3333)jhendersonHDF2023-08-022-2/+27
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* Fix H5Otoken_to_str call in h5dump and other minor cleanup (#3314) (#3329)jhendersonHDF2023-08-024-36/+72
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* Fix incorrect error check in H5Ofill.c for undefined fill values (#3312) (#3328)jhendersonHDF2023-08-023-4/+41
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* Switch parallel compression to use vector I/O (#3245) (#3327)jhendersonHDF2023-08-022-816/+544
| | | | Updates parallel compression feature to use vector I/O instead of creating and passing down MPI derived types to VFD
* Fix loading plugin fails with missing directory GH issue #3248 (#3323)Allen Byrne2023-08-023-3/+13
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* Update so numbers according to API changes since version 1.14.1. (#3309)Larry Knox2023-07-291-9/+9
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* Sync of src w/ develop (#3307)Dana Robinson2023-07-28289-14676/+12305
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* Bring clang-format changes from develop (#3305)Dana Robinson2023-07-283-38/+40
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* Brings an enum fix from develop (#3304)Dana Robinson2023-07-284-519/+568
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* Sync test dir w/ develop (#3303)Dana Robinson2023-07-28109-2040/+1982
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* Sync tools with develop (#3301)Dana Robinson2023-07-2884-626/+785
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* Sync testhdf5 files w/ develop (#3300)Dana Robinson2023-07-2821-532/+534
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* Sync ros3 VFD w/ develop (#3299)Dana Robinson2023-07-286-149/+583
| | | | | * Sync ros3 VFD w/ develop Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* Convert H5F_addr calls to H5_addr (#3297)Dana Robinson2023-07-27146-1293/+1291
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* Sync high-level library with develop (#3298)Dana Robinson2023-07-2730-840/+835
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* Sync Fortran w/ develop (#3296)Dana Robinson2023-07-2733-210/+203
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* Misc missed things from previous merges (#3295)Dana Robinson2023-07-2787-302/+218
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* Remove "Programmer" lines (#3294)Dana Robinson2023-07-27593-19248/+107
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* Brings over most of the HD prefix removal (#3293)Dana Robinson2023-07-27651-44739/+44374
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* Misc warnings and cross-compile improvements (#3281)Dana Robinson2023-07-2710-74/+80
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* Normalizes the public headers (#3292)Dana Robinson2023-07-2763-525/+509
| | | * Also brings over the apostrophe fix
* Fix assertion failure when attempting to use IOC VFD directly (#3187) (#3288)jhendersonHDF2023-07-274-0/+66
| | | Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
* Fix some warnings in developer builds (#3247) (#3291)jhendersonHDF2023-07-2722-269/+250
| | | | | * Fix some warnings in developer builds * Switch approach to Winline flag
* Subfiling VFD source cleanup (#3241) (#3290)jhendersonHDF2023-07-2737-3293/+173
| | | | | | | | | | | | | | | | | | | | | | | | * Subfiling VFD source cleanup (#3241) * Subfiling VFD source cleanup Modularize Subfiling CMake code into separate CMakeLists.txt file Update Mercury util code to latest version and update Copyright Generate mercury_util_config.h header file instead of using pre-generated file Remove unnecessary Mercury functionality Fix minor warning in Subfiling VFD code * Remove Mercury headers from Autotools publicly-distributed header list * Fix CMake builds when Subfiling VFD isn't enabled (#3250) * Fix CMake builds when Subfiling VFD isn't enabled * Add Subfiling VFD entry to hdf5-config.cmake.in
* API test updates (#3018) (#3287)jhendersonHDF2023-07-2737-3694/+4246
| | | | | | | | | | | | | | | | | | | | | | | | | * Remove macros from api tests (#2929) * Remove macros and undefined callbacks (#2959) * Remove remaining macros from H5_api_tests_disabled.h (#2968) * Put some vol capability checks in testpar tests and remove remaining warnings (#2995) * API tests datatype generation cleanup * Clean up API tests' random datatype generation and fix bug with enum datatype generation * Init parallel API tests with MPI_THREAD_MULTIPLE * HDF5 API tests - Check VOL connector registration * Determine whether a VOL connector failed to load before running API tests * Cleanup some usages of H5VL_CAP_FLAG_CREATION_ORDER in API tests * Remove some now-unused macros from H5_api_tests_disabled.h * Enable HDF5 API tests by default * Implement CMake option to install HDF5 API tests * Check for invalid AAPL from H5Acreate * Enable building of VOL connectors alongside HDF5 in CMake * Prepend CMake VOL URL option indices with 0s so they come in order * Don't turn on API tests by default yet * Document VOL connector FetchContent functionality * Add release note for API test updates * Only install testing library if API tests are installed * Fix grammar
* Normalize C++ w/ develop (#3279)Dana Robinson2023-07-2749-990/+249
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* Fix release version for some H5Pfapl routines (#3023) (#3286)jhendersonHDF2023-07-271-3/+3
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* Normalize java w/ develop (#3283)Dana Robinson2023-07-2724-639/+638
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* Normalize mirror server code (#3289)Dana Robinson2023-07-275-211/+153
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* Add test for HDstrcasestr macro (#2115) (#3285)jhendersonHDF2023-07-273-4/+65
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* Fix warning in cache_common.c (#2952) (#3284)jhendersonHDF2023-07-271-65/+77
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* Normalize examples w/ develop (#3282)Dana Robinson2023-07-2716-31/+22
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* Bump Autoconf to 2.71 (#3280)Dana Robinson2023-07-271-1/+1
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* Brings over some H5F changes (#3278)Dana Robinson2023-07-275-373/+346
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* Sync .github directory (#3277)Dana Robinson2023-07-275-19/+148
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