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* [svn-r1034] Changed spelling of extendable to extendible just for ↵Albert Cheng1999-01-271-8/+8
| | | | consistency sake.
* [svn-r1033] added some calls to get the time elapsed on WIN NTPatrick Lu1999-01-251-2/+105
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* [svn-r1032] Changes since 19990118Robb Matzke1999-01-2129-276/+766
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./tools/h5tools.c Strings are not converted to null-padding before being printed; they are printed with whatever byte values appear in the file. ./tools/h5ls.c Now able to display attribute data type and data. Added a `-f' or `--full' switch which causes the full name of each object to be displayed instead of just the base name. Added a `-r' or `--recursive' switch that recursively prints the contents of groups, avoiding cycles. More bulletproofing for non-printable characters in things like object names, attribute names, and comment strings. We don't want listing a file to send termal escape sequences because it's sometimes possible to execute commands that way. Since h5ls doesn't usually use quotes around object names we must sometimes escape space characters. External files are listed in a table to make the output less confusing. ./tools/h5tools.c ./tools/h5tools.h Changed h5dump() to h5dump_dset() and added h5dump_mem(). Also make h5dump_fixtype() public. ./test/dtypes.c Wrote some data to an attribute to test h5ls attribute printing. ./src/H5ACprivate.h ./src/H5Apublic.h ./src/H5Dprivate.h ./src/H5Dpublic.h ./src/H5Epublic.h ./src/H5Fprivate.h ./src/H5Fpublic.h ./src/H5Gprivate.h ./src/H5HLprivate.h ./src/H5Oprivate.h ./src/H5Ppublic.h ./src/H5RApublic.h ./src/H5Rpublic.h ./src/H5Spublic.h ./src/H5Tpkg.h ./src/H5Tpublic.h ./src/H5Vprivate.h ./src/H5Zpublic.h ./src/H5private.h ./src/H5public.h Reindented function prototypes after `HDF5API' was added. Also rewrapped long lines. ./src/H5Flow.c Added an `#ifdef WIN32' around an unused variable. ./src/H5api_adpt.h Removed extra carriage returns inserted by "broken" operating system. ./src/H5Dprivate.h ./src/H5Oprivate.h ./src/H5Vprivate.h ./src/H5private.h Removed extraneous inclusion of H5api_adpt.h since it's included in H5public.h which is included by everything. ./src/Makefile.in Added H5api_adpt.h to the list of public header files to fix broken `make install'.
* [svn-r1031] added necessary info to export info to the dllPatrick Lu1999-01-2113-252/+252
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* [svn-r1030] added necessary info to export functions to dllPatrick Lu1999-01-2111-65/+65
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* [svn-r1029] added the necessary information to make a dllPatrick Lu1999-01-211-1/+1
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* [svn-r1028] new include file that is needed on NT to export functions and ↵Patrick Lu1999-01-211-0/+25
| | | | gloabls in a dll
* [svn-r1027] Added CVS Revision and ID tags so we can track the snapshots ↵Quincey Koziol1999-01-201-0/+7
| | | | more effectively.
* [svn-r1026] Changes since 19990118Robb Matzke1999-01-201-1/+0
| | | | | | | | | ---------------------- ./tools/h5tools.c Strings are not converted to null-padding before being printed; they are printed with whatever byte values appear in the file.
* [svn-r1025] added new project files for the alpha versions and the dll versionPatrick Lu1999-01-191-0/+0
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* [svn-r1024] Purpose:Paul Harten1999-01-191-18/+19
| | | | | | | | | | | | | | | Bug fix Problem: When -with-hdf4 option is selected during configure, no machine type found for HDF4 header file hdfi.h. Solution: Modify hdf5/config/linux file: -D__i386 to be added to CPPFLAGS. Platform tested: linux(penfold)
* [svn-r1023] Changes since 19990105Robb Matzke1999-01-189-71/+121
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./INSTALL ./doc/html/Compression.html ./doc/html/Filters.html Disassociated GNU from zlib. Did not change the introduction which incorrectly states that compression in hdf5 is available only if GNU gzip is available (should read zlib). Changed a typo in INSTALL to match what is documented in various other places: that zlib 1.1.2 (not 1.0.2) or better is required for compression. Added a reference to the main zlib web page in various places. ./src/H5Fistore.c Fixed a typo in a comment. ./src/H5Flow.c Removed carriage returns from the end of lines. ./test/dsets.c The deflate compression tests are still run but `-SKIP-' is printed instead of `PASSED' if the zlib library was not detected at configuration time. The tests check that the compression layer (H5Z) is correctly bypassed.
* [svn-r1022] changed the macro for FILE to be FILENAME since it conflicted ↵Patrick Lu1999-01-121-12/+12
| | | | | | with a macro in a windows header.
* [svn-r1021] Purpose:Paul Harten1999-01-122-18/+40
| | | | | | | | | | | | | | | | Bug fix Problem: Segmentation fault when attempting to free NULL or uninitialized pointers. Problem noticed on Linux and HPUX10.20 platforms. Solution: Initialialize the pointer to NULL. Execute the "free" statement upon the condition that the pointer is not equal to NULL (i.e. after the allocation has taken place.) Platform tested: Linux, HPUX10.20, Solaris2.5
* [svn-r1020] I messed the last one up again. sorry this should be the last time.Patrick Lu1999-01-111-6/+4
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* [svn-r1019] the last version I checked in was not ocmpletely correct.Patrick Lu1999-01-111-1/+2
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* [svn-r1018] need to put a fix for a bug in the Microsoft compiler.Patrick Lu1999-01-111-1/+13
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* [svn-r1017] added new projects into the all project for a few new test programs.Patrick Lu1999-01-111-0/+0
| | | | also updated the config file in there
* [svn-r1016] *** empty log message ***Robb Matzke1999-01-071-0/+376
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* [svn-r1015] Got rid of some warning messages.Albert Cheng1999-01-074-5/+3
| | | | Tested in O2K.
* [svn-r1014] Switched the order of the assert and HRETURN_ERROR statementsAlbert Cheng1999-01-071-1/+1
| | | | | in the FUNC_ENTER_INIT to eliminate the unreachable statement compiler warning. Tested in O2K.
* [svn-r1013] *** empty log message ***Robb Matzke1999-01-071-1/+43
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* [svn-r1012] Changes since 19981217Robb Matzke1999-01-072-5/+124
| | | | | | | | | | ---------------------- ./tools/h5ls.c Displays enumeration type information. ./tools/h5tools.c Displays enumerated data using symbol names.
* [svn-r1011] Changes since 19981217Robb Matzke1999-01-074-6/+96
| | | | | | | | | | | ---------------------- ./test/dtypes.c ./test/enum.c [NEW] Added support for enumeration data types. ./test/fillval.c ./test/istore.c Fixed memory leaks during error handling.
* [svn-r1010] Changes since 19981217Robb Matzke1999-01-0713-1221/+2902
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./src/H5.c ./src/H5private.h Renamed `library_initialize_g' to `H5_libinit_g' to make it conform to our naming scheme. ./src/H5I.c Fixed a bug in H5I_dec_ref() that caused the return value to always be zero instead of the new reference count. ./src/H5.c ./src/H5Odtype.c ./src/H5T.c ./src/H5Tconv.c ./src/H5Tpkg.h ./src/H5Tprivate.h ./src/H5Tpublic.h Added support for enumeration data types. ./src/H5RA.c Renamed H5T_insert() to H5T_struct_insert() and added H5T_enum_insert(). ./src/H5RA.c ./src/H5Shyper.c Added casts to size_t for the third argument of memcpy() to shut up a warning message from insure++. ./src/H5T.c Changed "can't" to "unable to" in some error messages to be more consistent. ./src/H5detect.c If fork() or waitpid() are unavailable then we assume no alignment constraints. Hopefully this is the case only on NT and Intel CPU's don't have alignment constraints. ./src/H5public.h Include <limits.h> because the H5T_NATIVE_CHAR macro needs the definition for CHAR_MIN.
* [svn-r1009] *** empty log message ***Robb Matzke1999-01-071-1/+1
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* [svn-r1008] Changes since 19981217Robb Matzke1999-01-074-58/+15
| | | | | | | | | | | | | ---------------------- ./MANIFEST Removed some ddl files from tools/testfiles that are no longer part of CVS. Added new enum.c test. ./configure [REGENERATED] ./configure.in Changed printf long long format detection to favor `L' over `ll'.
* [svn-r1007] Updated with missing files.Quincey Koziol1999-01-061-0/+7
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* [svn-r1006] Updated output against the current version of the HDF4 dumper in ↵Quincey Koziol1999-01-068-39/+39
| | | | CVS.
* [svn-r1005] Reflected the changes in ddl to the example.Ruey-Hsia Li1999-01-061-12/+53
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* [svn-r1004] Purpose:Paul Harten1999-01-053-11/+84
| | | | | | | | | | | | | | | | Conform closer to other test print-out. Solution: Added "All h5dump tests passed." statement to output of testh5dump.sh when appropriate. Similarly, added "All h5toh4 tests passed." statement to output of testh5toh4 when appropriate. Also, added the testing of converting H5 files with loop pathways into H4 files with recursive references. Platforms tested: Solaris2.5, Digital Unix 4.0
* [svn-r1003] Fixed a couple of typosQuincey Koziol1999-01-052-3/+2
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* [svn-r1000] Purpose:Paul Harten1998-12-301-4/+11
| | | | | | | | | | | | | | | | | Conform closer to other test print-out. Problem: Multiple "PASSED" statements for single test results when test involves conversion of multiple files. Should be single "PASSED" statement for test results. Solution: "*FAILED*" statement given if conversion fails for any file. Differences given between expected results and actual results for each file that fails. "PASSED" statement given when conversion is successful for all files. Platform tested: Solaris2.5
* [svn-r994] Added h5toh4.Frank Baker1998-12-281-0/+106
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* [svn-r989] Purpose:Paul Harten1998-12-221-2/+22
| | | | | | | | | | Bug fix Solution: Have warning messages go to stderr instead of stdout. Platform tested: Solaris2.5
* [svn-r988] Purpose:Paul Harten1998-12-221-215/+151
| | | | | | | | | | | | | New feature, Documentation Solution: Changed h5toh4 testing output to more closely resemble other HDF5 testing output. Also added documentation to describe the puposes of the conversion test files. Platform tested: Solaris2.5
* [svn-r986] Defined <data> and <string> in ddl.html.Ruey-Hsia Li1998-12-212-30/+89
| | | | Updated the current status of dumper.
* [svn-r985] Checking in changes from "HDF5 Release 1.0" CVS branch that have ↵Frank Baker1998-12-2137-456/+3289
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | not yet been checked into "HDF5 Development" branch. General ======= Various "copy edit" types of repairs. Revisions to document cross-linking. Added structural links tying all docs together (banners at top and bottom of documents, similar to Reference Manual banners of the Beta release). Set background color to white in all documents. NCSAfooterlogo.gif hdf2.jpg New image files to make the documents more self-contained (i.e., to prevent loading images from NCSA and HDF home servers). index.html Redesigned to isolate links external to the installation in a single location. Intro to HDF5 ============= H5.intro.html Fixed banner linking Intro to other docs. Set all URLs to be relative within the distribution; nothing points back to the HDF server. Updates to "Limits of the Current Release" and "Changes in the Current Release." HDF5 User's Guide ================= Changed several User Guide section titles such that all sections that are primarily about a particular interface are now titled in the format "The xxxxx Interface (H5x)". H5.user.html Commented out links to developer docs since they are marked in MANIFEST as not being for distribution in the release. Removed 2nd and 3rd indices from page. Changed "freeform" lists of sections (TOCs) to aligned tables. Datatypes.html Removed the sentence "I'm deferring definition until later since they're probably not as important as the other data types." from Section 3.3, "Properties of Date and Time Atomic Types." Added info regarding 'char' versus 'string' datatypes. Added as Section 3.7, "Character and String Datatype Issues." References.html Commented out substantial material (at end of document) from References planning document that is not appropriate for the User Guide but that is worth keeping around. Groups.html Final edits from elimination of "current working group." HDF5 Reference Manual ===================== Removed "Draft" from the <title>__</title> lines. RM_H5Front.html Removed 2nd and 3rd indices from page. Changed "freeform" lists of sections (TOCs) to aligned tables. RM_H5F.html RM_H5P.html Add file mounting information.
* [svn-r984] Added ./tools/testfiles/tloop-1.ddl.Ruey-Hsia Li1998-12-211-5/+1
| | | | | | | | Removed ./tools/testfiles/tattr-4.ddl ./tools/testfiles/tcomp-4.ddl ./tools/testfiles/tdset-3.ddl ./tools/testfiles/tdset-4.ddl ./tools/testfiles/tgroup-3.ddl.
* [svn-r983] Added tests in testh5dump.sh.Ruey-Hsia Li1998-12-214-215/+349
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Features of this version of dumper * loop detection * data type ** atomic type -> H5T_INTEGER (H5T_STD_XXXXX) -> H5T_FLOAT (H5T_IEEE_XXXXX) -> H5T_STRING (H5T_C_S1, H5T_FORTRAN_S1) ** committed/transient/unamed compound type * data space ** scalar space ** simple space * dataset dumper can display dataset's ** attribute ** type ** space ** data * group dumper can display group attributes and group members which include ** named/unamed data type ** group ** dataset ** softlink * attribute dumper can display attribute's ** type ** space ** data * hard link * soft link * format of data ** fit on 80 columns ** end of line after each row (more work will be done on data.)
* [svn-r982] Added test for loop detection.Ruey-Hsia Li1998-12-2124-443/+349
| | | | | Updated expected output for dumper automatic tests. Removed redundant tests.
* [svn-r979] SnapshotRobb Matzke1998-12-211-1/+1
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* [svn-r978] Purpose: Bug fixesPaul Harten1998-12-213-260/+1051
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Problems: There were three separate bugs in the h5toh4 converter worked on. They were: 1) When a loop was detected, the H4 file was missing references to paths which were available in the H5 file. 2) When an H4 SDS or Vdata was created from a H5 dataset, the H4 object was referenced in the root group, instead of the correct Vgroup. 3) The FIRST path taken to an object for the h5toh4 conversion could not involve a SOFTLINK. Solutions: The bug fixes were: 1) All of the associated references to available paths which occur in the H5 file, now appear in the H4 file. 2) After an H4 SDS or Vdata is created from a H5 dataset, the H4 object is tag/ref'ed in the appropriate Vgroup. 3) The FIRST path taken to an H5 object for the H5toh4 conversion may involve a HARDLINK, a SOFTLINK, or neither. The same is true of any additional paths to the same object. Platform tested: Solaris2.5
* [svn-r977] Purpose:Paul Harten1998-12-2132-500/+1317
| | | | | | | | | | | | New feature Solution: Added some new new tests to show that paths involving HARDLINKS and paths involving SOFTLINKS convert existing objects from H5 to H4 the same way that paths involving no links does. Platform tested: Solaris2.5
* [svn-r976] SnapshotRobb Matzke1998-12-192-2/+2
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* [svn-r975] Put back Paul's updates.Ruey-Hsia Li1998-12-181-0/+200
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* [svn-r974] SnapshotRobb Matzke1998-12-182-2/+2
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* [svn-r973] Added tests for scalar data space, string data type, loop ↵Ruey-Hsia Li1998-12-171-227/+117
| | | | | | detection and compound data type.
* [svn-r971] Changes since 19981214Robb Matzke1998-12-1747-1879/+1561
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./INSTALL Added warning that enabling debugging code can adversely affect performance even when the debugging isn't turned on at run-time. Performance testing shows that under certain circumstances (like data type conversions of compound types) the H5_timer functions, although only a few lines each, contribute a fairly large percent to the execution time. ./src/H5T.c ./src/H5Tpkg.h ./src/H5Tpublic.h Improved the H5Tunregister() function to make unregistering more flexible. It takes the same arguments as H5Tregister() but also accepts wild cards. All conversion functions that match the H5Tunregister() search criteria are removed from the global type conversion table. The H5Tregister_hard() and H5Tregister_soft() were combined into a single function called H5Tregister() which is the counterpart to H5Tunregister(). A new `persistence' argument was added to differentiate between the two types of conversion functions. The application is allowed to register a hard conversion function for the no-op conversion path although the library isn't obligated to call it (it usually does). This is mostly for completeness, but the application might use it to help determine if the raw data pipeline was able to use the optimized path for the case when no type conversion is necessary. The library doesn't allow this path to be unregistered although the application can redefine it as often as it likes. Fixed the type conversion tables in preparation for MT-safety and to fix previosly-known design bugs wrt. unregistering conversion functions or changing the C function associated with a conversion path. The MT-safety stuff is documented in a separate white paper. Increased the conversion function debugging name from 9 characters to 31 characters so the output can be more descriptive. Moved conversion path statistics from the H5T_cdata_t member into the conversion path itself. This makes H5T_cdata_t contain only application-visible data structures. ./src/H5A.c ./src/H5D.c ./src/H5Ofill.c ./src/H5P.c ./src/H5T.c Improved the way type conversion functions are called so the caller doesn't have to check for data type debugging and increment type conversion timers and statistics. Changed check for no-op conversion since it is now application-definable and there may even be more than one definition at a time in a multi-threaded application (one thread might be using the no-op conversion path when some other thread changes its definition -- the first thread still sees the original defintion until it's done with the operation). ./doc/html/Datatypes.html Updated the user guide to reflect the changes to data type conversion registration functions. ./bin/trace ./src/H5.c Added tracing support for the new H5T_pers_t data type. ./test/dtypes.c Added printf to display alignment value if non-aligned data types are being tested. ./test/h5test.c Modified the H5Tunregister() calls to use the new arguments. All 94 of those calls can be replaced by a single call to the new H5Tunregister() function. ./src/H5.c Added HAVE_GETTIMEOFDAY around an auto variable and initialized the elapsed time to zero when gettimeofday() is not available. ./src/H5F.c ./src/H5Fprivate.h ./src/H5P.c Added an H5*_init() functions which do the same thing as H5*_init_interface() but can be called from other packages and don't do anything if the interface is already initialized. This fixes a couple memory leaks in applications that repeatedly close and open the library with H5close(). ./src/H5Tconv.c Optimized some data alignment code in the hardware conversion functions. Hardware conversions accumulate statistics about source and destination data alignment and print that information when the conversion function is unregistered (usually when the application exits) if data type debugging is compiled into the library and enabled at run-time. The conversion caching was cleaned up for the compound data type conversion function. It now caches conversion paths in a manner that will be MT-safe and is much simpler than the old method. Also cleaned up some array index maps. ./src/H5detect.c Fixd mispelling of alingemnt. ./src/H5private.h Changed `TRUE' to `1' in assignment to interface_initialize_g in FUNC_ENTER macro definition. ./tools/testh5dump.sh Completely rewritten to make it shorter, better documented, and conforming to most of the other test outputs. The comparison of the actual output with the expected output is insensitive to differences in white space. The test now passes for the first time on Linux where the output width wasn't as expected but the output was otherwise correct. ./tools/testfiles/tall-1.ddl ./tools/testfiles/tall-2.ddl ./tools/testfiles/tall-3.ddl ./tools/testfiles/tattr-1.ddl ./tools/testfiles/tattr-2.ddl ./tools/testfiles/tattr-3.ddl ./tools/testfiles/tattr-4.ddl ./tools/testfiles/tcomp-1.ddl ./tools/testfiles/tcomp-2.ddl ./tools/testfiles/tcomp-3.ddl ./tools/testfiles/tcomp-4.ddl ./tools/testfiles/tdset-1.ddl ./tools/testfiles/tdset-2.ddl ./tools/testfiles/tdset-3.ddl ./tools/testfiles/tdset-4.ddl ./tools/testfiles/tgroup-1.ddl ./tools/testfiles/tgroup-2.ddl ./tools/testfiles/tgroup-3.ddl ./tools/testfiles/tlink-1.ddl ./tools/testfiles/tlink-2.ddl ./tools/testfiles/tlink-3.ddl ./tools/testfiles/tlink-4.ddl ./tools/testfiles/tlink-5.ddl ./tools/testfiles/tslink-1.ddl ./tools/testfiles/tslink-2.ddl Changed `../h5dump' to just `h5dump'. ./config/alpha-dec-osf4.0 Added more warning and optimization switches to the native compiler.
* [svn-r969] SnapshotRobb Matzke1998-12-152-2/+2
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