| Commit message (Collapse) | Author | Age | Files | Lines |
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Code optimization
Description:
Avoid making copy of default vlen allocation info when default DXPL is
used. Just retarget pointer to point to default info directly.
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.10 (sleipnir) w/parallel
Too minor to require h5committest
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Code optimization
Description:
Be smarter about copying hyperslab selection data and avoid memcpy() calls.
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.10 (sleipnir) w/parallel
Too minor to require h5committest
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h5dump new feature
Description:
add processing of tab characters (in the context of the new CR/LF option )
Solution:
Platforms tested:
linux
solaris
AIX
Misc. update:
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Code optimization
Description:
Eliminate memcpy() when using default DXPL by pointing at existing
default object, instead of copying it.
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.10 (sleipnir) w/parallel
Too minor to require h5committest
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Bump version # after making snapshot for user.
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Code optimization
Description:
Use 'size_t' instead of 'hsize_t' to track the number of elements in
memory buffers, especially for type conversion.
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.10 (sleipnir) w/parallel
Too minor to require h5committest
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Description: I put function call of H5T_lock in H5T_open in last checkin. It's
unnecessary.
Solution: Take out.
Platforms tested: eirene(simple change).
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Code optimization
Description:
Detect when a default property list is being used and just copy over the
default VL allocation properties, instead of querying for them.
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.10 (sleipnir) w/parallel
Too minor to require h5committest
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Code cleanup & optimization
Description:
Remove old structures that used a union to store information about the
dataspace extent and just store the information directly in the dataspace
extent itself.
Remove ifdef'd references to permutation ordering in dataspaces. We'll
definitely need more than this code if/when we implement this feature.
Change allocation of dataspace information from calloc() to malloc().
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.10 (sleipnir) w/parallel
Too minor to require h5committest
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Code optimization
Description:
Using existing dataspace extent copying routine instead of duplicating the
code (more slowly).
Also, back-port improvements to the dataspace message reading which clean
up the clean and centralize operations.
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.10 (sleipnir) w/parallel
Too minor to require h5committest
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Code optimization
Description:
Revised dataspace selections to use a more "object oriented" mechanism
to set the function pointers for each selection and selection iterator. This
reduces the amount and number of times that dataspace selection info has to
be copied.
Additionally, change hyperslab selection information to be dynamically
allocated instead of an inline struct.
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.10 (sleipnir) w/parallel
Too minor to require h5committest
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Code optimization
Description:
Avoid a memory copy by directly reading from the variable-length sequence
buffer when there is no type conversion on the way to disk.
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.10 (sleipnir) w/parallel
Too minor to require h5committest
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Code optimization
Description:
Avoid running conversion routine when it's a noop.
Also, pick a minimum size for the variable-sized sequence conversion
buffer, instead of allocating lots of small buffers.
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.10 (sleipnir) w/parallel
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Code optimization
Description:
Restructure conversion loop of variable-length objects to avoid walking
through memory backwards and allocating as many temporary buffers. (This uses
the optimized method used in the atomic type conversions).
Also bring back another optimization for variable-length datatypes that
avoids querying the DXPL so many times.
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.10 (sleipnir) w/parallel
Too minor to require h5committest
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Code optimization
Description:
Allow global heap collections to grow in size (up to a 64K limit) if they
are able to. This allows them to grow to a more reasonable size than the 4K
minimum size.
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.10 (sleipnir) w/parallel
Too minor to require h5committest
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Description: After compound datatype with variable-length string in the fields is committed
to file, when it's read back, the size is messed up.
Solution: change the size when it's committed to file by calling H5T_set_loc.
Platforms tested: h5committest and arabica
Misc. update: RELEASE.txt
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bug fix
Description:
a prototype for a new function used by h5tools_str.c was accidently left in that file
the c++ compiler treats this as an error
Solution:
removed the prototype, and pointed to the correct one (in h5tools_ref.h )
Platforms tested:
Free BSD (c++)
linux
Misc. update:
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Code cleanup
Description:
Add more files that should be removed to the clean & distclean targets.
Platforms tested:
FreeBSD 4.10 (sleipnir)
Too minor to require h5committest
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Code optimization
Description:
Eliminate redundant memory allocation for type conversion of variable-length
sequences.
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.10 (sleipnir) w/parallel
Too minor to require h5committest
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Update.
Description:
1. Update toolslib and toolslibD projects in Windows.
2. Update hdf5diff, hdf5ls, hdf5import, and hdf5repack batch testing files in Windows.
Solution:
1. Add new source file h5tools_ref.c and head file h5tools_ref.h into toolslib and toolslibD projects.
2. Update hdf5diff, hdf5ls, hdf5import, and hdf5repack batch testing files to match with the
corresponding tests in Unix. Also now the outputs from these batch files will directly
show whether these tests pass or fail.
Platforms tested:
Windows XP/Visual C++ 6.0
Misc. update:
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Code optimization
Description:
Eliminate redundant memset() when creating chunk map structure.
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.10 (sleipnir) w/parallel
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h5dump update
Description:
updated the h5dump test file generator so that it coincides with the 1.7 branch
Solution:
Platforms tested:
linux (small change)
Misc. update:
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Code optimization
Description:
Eliminate some operations through temporary variables in H5F_addr_encode.
Eliminate some redundant memset()'s of structures that will be completely
overwritten in the variable-length datatype code.
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.10 (sleipnir) w/parallel
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h5dump new features
Description:
added the code for print strings with new line and display the path of references (new source files h5tools_ref.c and .h )
added a test suite in testh5dump.sh.in for
( note : to create testh5dump.sh , one must redo ./configure; this detects the availability of filters
and generates testh5dump.sh accordingly)
1) storage layout
2) fill value
3) print reference with path
4) print strings with new lines
5) filters
Solution:
Platforms tested:
linux
solaris
AIX
Misc. update:
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bug fix
Description:
one of the h5diff tests was reading the wrong hdf5 file
Solution:
substituted for the correct file
Platforms tested:
linux (small change)
Misc. update:
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Update.
Description:
Update some Windows project source files as Quincey renamed several files in CVS.
Solution:
Quincey renamed the following files in CVS:
H5Fcompact.c -> H5Dcompact.c H5Fcontig.c -> H5Dcontig.c H5Fistore.c -> H5Distore.c H5Fseq.c -> H5Dseq.c hdf5, hdf5dll, and hdf5_cf90stub project files were updated to reflect the change.
Platforms tested:
Windows XP/Visual C++ 6.0.
Misc. update:
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Code optimization
Description:
Call malloc() instead of calloc() for data structure that we completely
initialize.
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.10 (sleipnir) w/parallel
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Code optimization
Description:
Don't allocate conversion buffer larger than the user's buffer.
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.10 (sleipnir) w/parallel
too minor to require h5committest
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Bug fix
Description:
Correct path to new testh5dump.sh, now that it's generated.
Platforms tested:
FreeBSD 4.10 (sleipnir) w & w/o srcdir
Too minor to require h5committest
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Update release notes
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Bug fix
Description:
Correct potential file corruption from mis-setting the metadata accumulator
address. (Bugfix contributed by Sean Monner <seanm@quadrus.com>)
Solution:
When the new metadata overlaps with the end of the metadata accumulator and
the accumulator grows in size, don't reset the address of the accumulator, since
it hasn't moved.
Platforms tested:
FreeBSD 4.9 (sleipnir)
too minor to require h5committest
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Update shell scripts
Description:
Switch to generating the testh5dump.sh script at configure time, so we can
determine which filters are available to test.
Platforms tested:
FreeBSD 4.9 (sleipnir)
too small to require h5committest
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Code optimization
Description:
Avoid pushing errors on error stack when an object is not found in a B-tree.
Sometimes we are just checking if the object exists before we insert it into
the B-tree and the higher levels in the library should be responsible for
determining if not finding the object in B-tree is really an error.
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.10 (sleipnir) w/parallel
too minor to require h5committest
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Code optimization
Description:
Use default dataset transfer property list for internal metadata I/O
operations when parallel I/O is disabled. This avoids multiple copies of
the properties being made when the information is not needed.
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.10 (sleipnir) w/parallel)
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Fix makefiles, dependencies & manifest after source file rename.
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Rename these files
Description:
Since these files contain functions that are part of the dataset information
now, rename them to H5D<foo>.c
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Refactor code
Description:
Move chunk and contiguous cached raw data from file information to dataset
information. This simplifies a number of internal interfaces, aligns the
code with it's purpose better and should allow more optimizations to the
chunked data I/O performance.
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.10 (sleipnir)
h5committest
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Refactor code
Description:
Move chunk and contiguous cached raw data from file information to dataset
information. This simplifies a number of internal interfaces, aligns the
code with it's purpose better and should allow more optimizations to the
chunked data I/O performance.
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.10 (sleipnir)
h5committest
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Update
Description:
Update the dumptest batch file for Windows.
Solution:
This new dumptest batch file can directly show whether each dump test passed or failed, while the former
version can only show whether there is any difference between the expected and actual output files with
fc command.
Platforms tested:
Windows XP/Visual Studio C++ 6.0.
Misc. update:
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Misc. update: Update information about opaque type fix.
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Description: Test if datatype operation can handle opaque type without any tag.
Platforms tested: h5committest.
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Description: After an opaque datatype is created, if no tag is attached, some operations will have
trouble to deal with null string of tag.
Solution: Initialize opaque's tag as empty string when it's created.
Platforms tested: h5committest.
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Code optimization & cleanup
Description:
Don't recompute the internal index value for looking up the chunk in the
hash table, just use the value already computed from iterating through the
chunks.
Also, back-port some of the various cleanups to the source code from the
development branch, to make diffing the code easier.
Platforms tested:
Solaris 2.7 (arabica)
FreeBSD 4.9 (sleipnir) w/parallel
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Description: One of the CFLAGS -D__GNUC__ caused problem for ecc 8.
It was added because there was conflicting definition for int64_t
in /usr/include/stdint.h and /usr/include/sys/types.h when ecc was updated to
7.1. Since those two files have been updated, the problem is no longer there.
Solution: take the flage -D__GNUC__ out.
Platforms tested: ecc on titan, the only place concerned.
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Update.
Description:
Add new files added by Quincy Koziol into Windows Workspace. Update the dumptest and deleteline batch files.
Solution:
1. Add H5DTest.c and H5Dpkg.h to the sourde and header files of hdf5 and hdf5dll projects.
2. Updated deleteline batch file. Compared with the former version, the deleteline batch file running time
is reduced greatly and the output from the deleline batch file looks much better.
3. Updated h5dump tests under Windows to match with the new boot block and file contents tests added by
Pedro Vicente under Unix.
Platforms tested:
Window XP Visual C++ 6.0, DEC FORTRAN 6.0
Misc. update:
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bug fix
Description:
Somehow in the function error_msg, a #ifdef WIN32 combine the stdout and stderr into a stdout for windows platforms. This will cause the confused output of dumper test on windows.
Erase this macro.
Solution:
See above.
Platforms tested:
windows XP with MSVS 6.0 by xuan.
No need to test on other platforms.
Misc. update:
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Code optimization & bug fix
Description:
When dimension information is being stored in the storage layout message
on disk, it is stored as 32-bit quantities, possibly truncating the dimension
information, if a dimension is greater than 32-bits in size.
Solution:
Fix the storage layout message problem by revising file format to not store
dimension information, since it is already available in the dataspace.
Also revise the storage layout data structures to be more compartmentalized
for the information for contiguous, chunked and compact storage.
Platforms tested:
FreeBSD 4.9 (sleipnir) w/parallel
Solaris 2.7 (arabica)
h5committest
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