summaryrefslogtreecommitdiffstats
Commit message (Collapse)AuthorAgeFilesLines
* [svn-r18101] SnapshotHDF Tester2010-01-107-21/+21
|
* [svn-r18099] Description:Scot Breitenfeld2010-01-084-55/+68
| | | | | | | | | Merged changes from trunk/fortran into the branch used: svn merge -r 17682:18098 https://svn.hdfgroup.uiuc.edu/hdf5/trunk/fortran Tested on: jam (intel) amani (pgi)
* [svn-r18073] Description:Quincey Koziol2010-01-0724-559/+1622
| | | | | | | | | | | | | | | Bring r18072 from trunk to 1.8 branch: Bring r18071 from metadata journaling merge branch: Refactor local heap routines with changes from metadata journaling branch, along with other misc. changes as the changes on the metadata journaling branch are being converged with the current state of the trunk. Tested on: Mac OS X/32 10.6.2 (amazon) debug & prod Linux/64 2.6 (amani) prod FreeBSD/64 (liberty) prod
* [svn-r18069] Added entry to MANIFEST for new file config/ibm-aix.Larry Knox2010-01-061-0/+1
| | | | Tested chkmanifest on jam.
* [svn-r18064] Purpose:Albert Cheng2010-01-051-0/+170
| | | | | | | Port to AIX 6.1 for RS6000. Should be the same as PowerPC based AIX. Tested: Blue-print of NCSA.
* [svn-r18063] Fix bug in links.c which occurs when zlib is disabled. This ↵Neil Fortner2010-01-041-1/+1
| | | | | | | | | | was fixed in the trunk in r17751, but was not ported to 1.8 because that feature (compress group fheap) had not beed added to 1.8 yet. This fix should have been ported to the cgfh branch at the time, but it was overlooked. Tested: Fedora (too small for commit test)
* [svn-r18062] SnapshotHDF Tester2010-01-047-22/+22
|
* [svn-r18058] SnapshotHDF Tester2009-12-277-22/+22
|
* [svn-r18056] Bug fix: 1192Albert Cheng2009-12-268-26/+60
| | | | | | | | Description: Fixed exit code (sometimes return code in Main) to follow the HDF5 standards. Tested: Jam, both serial and parallel.
* [svn-r18054] Updated for the moves of the testfiles.Albert Cheng2009-12-261-4/+2
| | | | Checked by bin/chkmanifest.
* [svn-r18053] Bug fix: 1192Albert Cheng2009-12-2618-101/+155
| | | | | | | | Description: Fixed exit code (sometimes return code in Main) to follow the HDF5 standards. Tested: H5committested plus serial test in Jam.
* [svn-r18052] Moved gif2h5 tools tesfiles from hl/tools/testfiles to ↵Albert Cheng2009-12-253-2/+2
| | | | | | | | | hl/tools/gif2h5/testfiles so that it has its own testfiles directory. Tested: h5committested.
* [svn-r18050] Bug fix: 1192Albert Cheng2009-12-257-33/+39
| | | | | | | | Description: Some exit code (sometimes return code in Main) to follow the HDF5 standards. Tested: H5committested plus serial test in Jam.
* [svn-r18049] SnapshotHDF Tester2009-12-217-22/+22
|
* [svn-r18046] Description:Quincey Koziol2009-12-204-15/+13
| | | | | | | | | | | | Bring r18045 from trunk to 1.8 branch: Slush changes back & forth between trunk, the merging branch and the metadata journaling branch to level them out to a reasonably common set of code to work from for the next set of more significant changes. Tested on: FreeBSD/32 6.3 (duty) w/debug (h5committested on trunk)
* [svn-r18042] Description:Quincey Koziol2009-12-194-43/+43
| | | | | | | | | | | Bring r18039 from trunk to 1.8 branch: Minor code cleanups, to align better w/ongoing metadata journaling convergence. Tested on: Mac OS X/32 10.6.2 (amazon) w/debug (too minor to require h5committest)
* [svn-r18038] Description:Quincey Koziol2009-12-1922-605/+413
| | | | | | | | | | | | | | Bring r18037 from trunk to 1.8 branch: Bring r18035 from merge_metadata_journaling branch to trunk: More "brush clearing" convergence between metadata_journaling branch and the trunk. Tested on: Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode (h5committested on trunk)
* [svn-r18034] Description:Quincey Koziol2009-12-191-5/+3
| | | | | | | | | Bring r18033 from trunk to 1.8 branch: Correct error in merging Coverity changes in r18011 Tested on: None - eyeballed only (very simple)
* [svn-r18032] Description:Quincey Koziol2009-12-1778-1947/+757
| | | | | | | | | | | | | | | | | Bring r18031 from trunk to 1.8 branch: Bring r18030 from merge_metadata_journaling branch to trunk: Bring "brush clearing" changes (whitespace & style issues, mostly) from metadata_journaling branch to the "merging" branch, to converge the trunk and the metadata_journaling branch. Also, some other minor cleanups along the way. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode (h5committested on trunk)
* [svn-r18026] On Boeing's OpenVMS, the value of EXIT_FAILURE is 268435458.Raymond Lu2009-12-161-1/+8
| | | | | | | | (The test is in test_exit_definitions.) Their document says it's supposed to be 2. I commented it out for further consideration. Tested on jam - simple change.
* [svn-r18023] I removed a duplicated line from the read_old function. There ↵Raymond Lu2009-12-161-3/+0
| | | | | | | | were 2 identical calls to the function H5Fopen. Tested on jam and OpenVMS.
* [svn-r18021] I added tlinks to testhdf5.Raymond Lu2009-12-161-1/+2
| | | | Tested v1.8.4 on OpenVMS.
* [svn-r18014] SnapshotHDF Tester2009-12-147-22/+22
|
* [svn-r18013] Description:Quincey Koziol2009-12-1316-445/+514
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bring r18011 from trunk to 1.8 branch: Bring Coverity changes into the trunk: (also other minor cleanups) r17991: Fix Coverity items 175 and 176. Fixed memory leak on error in print_enum in H5LT.c. r17993: (r17992 was not a Coverity change) Close Coverity issue #206: inconsistently checking whether dt->shared was non-NULL after H5T_alloc() returned a valid 'dt' value (which should guarantee that dt->shared is valid). r17994: Fix Coverity item 149. Fixed file handle leak on error in H5FD_stdio_open. r17995: Fixed Coverity issues 154 to 161: Added H5MP_close routine to error handling in the event *mp has not been freed before error. r17996: Close Coverity issue #126: potentially leaking merged_spans on routine failure. r17997: Fix Coverity items 147 and 148. Fixed resource leaks on error in H5FDloc.c. r17998: Coverity issue 269-272: Added integer result variable to functions that could return negative. Assigned to unsigned after checking. Added H5E_BEGIN_TRY block around H5Tclose and removed H5E_THROW in the catch block. Checked buffer is NULL before free. Changed HGOTO_ERROR outside of the if block to H5E_THROW. r17999: Close Coverity issue #127: release temporary spans in more generic manner. (Also add error checking to previous fix) r18000: Resolved Coverity issues 211 and 212 in H5T.c. Added comments to ignore Coverity warning regarding not checking pointer for NULL, as we are using an assert which catches the issue. r18001: Fix Coverity item 146. Fixed resource leak on error in H5O_layout_copy. r18002: Fix Coverity items 143 and 145. Fixed resource leaks on error in H5D_compact_copy and H5D_contig_copy. r18003: Close Coverity issue #192: close file on error r18004: Fix Coverity issue #125: release temporary spans on error r18005: Resolved Coverity issues 5, 25, and 83 (in H5T.c): Separated embedded functions in order to check for NULL on return of H5I_object before passing into H5T_copy. Check to see if new_dt is NULL within error handling before dereferencing it. Ignore Coverity's dead code warnings as the checks that lead to the code are machine dependent. r18006: Coverity 63,70,73: Checked result of function before assigning to an unsigned variable. r18007: Coverity 78,79: added continue statement if H5Pget_filter2 returns negative. r18008: Fixed Coverity issue # 138: Added support in error handling to free dst pointer (if allocated) on error. r18009: Whitespace & coding style cleanup Tested on: Mac OS X/32 10.6.2 (amazon) w/debug & production (h5committested on trunk)
* [svn-r17990] Tested MinGW environment on XP32 with latest environment and ↵Allen Byrne2009-12-112-35/+32
| | | | | | gcc 4.4.0 tools. Tested: Windows XP 32bit
* [svn-r17984] I put the bug fix info for #1584. No test is needed.Raymond Lu2009-12-101-0/+3
|
* [svn-r17983] Description:Quincey Koziol2009-12-101-50/+47
| | | | | | | | | | Bring r17981 from trunk to 1.8 branch: Abstract "print header" code into separate routine. Tested on: Mac OS X/32 10.6.2 (amazon) w/debug (too minor to require h5committest)
* [svn-r17982] Description:Quincey Koziol2009-12-1027-636/+964
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bring r17980 from trunk to 1.8 branch: Bring Coverity changes into the trunk: (also other minor cleanups) r17955: Fix Coverity item 24. Add missing error condition to H5AC_ext_config_2_int_config. r17956: Fix Coverity item 24. Improve error checking in H5A_compact_build_table_cb. r17957: Fix Coverity item 150. Fix warning in H5A_compact_build_table_cb. r17958: Fix Coverity item 117. Fix error handling in H5B_shared_new. r17959: Fix Coverity item 209. Added an assertion for leaf->shared in H5B2_cache_leaf_dest. r17960: Fix Coverity item 208. Added an assertion for internal->shared in H5B2_cache_internal_dest. r17961: Fix Coverity item 89. Reworked the code to avoid array overrun in H5C__autoadjust__ageout__insert_new_marker. r17962: Fix for coverity Resource_leak 195,203,204,205. r17963: Fix Coverity item 44. Prevented potential NULL dereference in H5D_btree_debug. r17964: Fix Coverity issues #197, 198 & 199: memory not being released. (Also clean up other resource leaks in nearby and/or similar code). r17965: Fix Coverity issue #151: release resources on error r17966: Fix Coverity issue #187: Remove leftover code remnant from prior bugfix which was causing resource leak of open files. r17967: Fixed Coverity issues # 193 & 194. Removed unnecessary memory allocation and added comparison of length of path parameter to the size of the destination buffer in h5import.h/h5import.c. r17968: Fix Coverity item 144. Fixed memory leak on error in H5D_chunk_copy. r17969: Fix for coverity Resource_leak #196. r17970: Coverity 167-173: Initialized pointer of buffers. In error handling, closed types and free memory. Tested on: FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode (h5committested on trunk)
* [svn-r17979] Description:Quincey Koziol2009-12-092-17/+11
| | | | | | | | | | Bring r17978 from trunk to 1.8 branch: Simplify checking for detecting variable-length strings. Tested on: Mac OS X/32 10.6.2 (amazon) debug & production Too minor to require h5committest
* [svn-r17976] Bug fix for 1584. H5Tdetect_class said a VL string is a string ↵Raymond Lu2009-12-0913-25/+48
| | | | | | | | | | | type. But when it's in a compound type, it says it's a VL type. We want to tell user a VL string is a string. But internally we treat it as a VL type. I added a flag as a parameter of H5T_detect_class. It tells whether the caller is the public function H5Tdetect_class. I also added a detection for VL string in the private function for the compound case (or array or nested VL type). Tested with h5committest.
* [svn-r17975] SnapshotHDF Tester2009-12-078-31/+34
|
* [svn-r17972] Description:Quincey Koziol2009-12-078-58/+118
| | | | | | | | | | | | Bring r17971 from trunk to 1.8 branch: Allow the core VFD to properly support opening backing store files through symbolic links and have the external links in the file be treated in the same way as for the sec2 driver. Tested on: FreeBSD/32 6.3 (duty) in debug mode (h5committested on trunk)
* [svn-r17954] Description:Quincey Koziol2009-12-0319-291/+429
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bring r17953 from trunk to 1.8 branch: Bring Coverity changes into the trunk: r17877: Error 266: Uninitialized memspace set to -1. Changed malloc and free to HDmalloc and HDfree. Removed unused dtype var. r17878: Error 265: Uninitialized mem_space set to -1. Changed malloc and free to HDmalloc and HDfree. Error 267: Uninitialized smspace set to -1. Changed malloc and free to HDmalloc and HDfree. r17879: Error 242: Uninitialized aid set to -1. Error 243: Uninitialized sid set to -1. Uninitialized tid set to -1 for consistency r17880: Error 242: reinitialized aid to -1 after close to be ready for reuse. Error 243: reinitialized sid to -1 after close to be ready for reuse. reinitialized tid to -1 for consistency after close to be ready for reuse. r17881: use valgrind to check there is a memory leak. The fix is to free ptrstr in line 5838 at xml_dump_group() of h5dump.c after it is used. run the valgrind after the fix, no memory leak for that part of the code. r17882: Fix Coverity items 256 and 269. r17883: Error 222-230: initialized hid_t vars to -1 after close to be ready for reuse. Also added H5Tclose for tid in gent_bigdims r17884: Bug fix (Coverity run2, view 23, dead code) (this is pair-program done by Albert, Elena and Larry). Confirmed and fixed the deadcode in hyperslab read branch of function diff_datasetid. (Discovered other bad code that diff_datasetid() should be recoded. Bug 1693 is entered for this.) r17906: Fix Coverity item 260. r17907: 262: Initialized hid_t's dtype, dtype_tmp and file to -1. Initialized H5T_t * dt to NULL. r17908: Fix Coverity item 261. r17909: Fix Coverity item 248. r17910: Revise fix for Coverity item 248. r17911: Resolved coverity issues #s 263, 162, 163, 164. All issues in dsets.c. Initialized fid and did hid_t's. filter_corrupt function was returning in the middle of an if statement, bypassing free calls. Updated error handling to free buffers and hid_t's appropriately. r17912: (done by Larry and Albert) Cleanup Coverity view warnings (#231-241) about using uninitialized variables. Initialized all of them. r17913: Resolved issue 251 and 264. Initialized tid2 to -1 and initialized buffers that were freed in case of an error. r17914: Resolved coverity issues 66, 220, and 221: 66: Negative Return assignment ignored 220,221: Initialized hid_t's. r17915: Fix Coverity item 247. r17916: Fix Coverity item 246. r17917: Fix Coverity item 245. r17918: Fix Coverity item 244. r17919: Coverity Issue #84: Moved asserts in H5T_cmp to the top of the function, and converted them to HDassert. Coverity complaining about using potentially NULL pointer without checking it. Want to see if Coverity will accept Assertions as acceptable checking before using the value. Tested on: FreeBSD/32 6.3 (duty) w/debug (h5committested on trunk)
* [svn-r17952] Description:Quincey Koziol2009-12-031-103/+116
| | | | | | | | | | Bring r17951 from trunk to 1.8 branch: Skip symlink test for external links when not using the sec2 VFD. Tested on: Mac OS X/32 (amazon) w/various VFDs (too minor for h5committest)
* [svn-r17950] Added new H5SMmessage.c file to project filesAllen Byrne2009-12-022-0/+8
| | | | Tested: Windows
* [svn-r17944] Description:Quincey Koziol2009-12-0132-662/+1268
| | | | | | | | | | | Bring r17943 from trunk to 1.8 branch: Finish refactoring v2 B-trees so that they can have client callback context provided to the encode/decode callbacks. Tested on: FreeBSD/64 6.3 (liberty) (h5committested on trunk)
* [svn-r17942] Description:Quincey Koziol2009-12-011-2/+15
| | | | | | | | Forgot to run bin/reconfigure before last checkin, done now. Tested on: FreeBSD/32 6.3 (duty) (h5committested on trunk)
* [svn-r17941] Description:Quincey Koziol2009-12-0119-374/+752
| | | | | | | | | | | | Bring r17939 from trunk to 1.8 branch: Handle external links from symlinked files by adding another check to look for "child" files for links from the actual location of the "parent" file, instead of from the location of the symlink. Tested on: FreeBSD/32 6.3 (duty) (h5committested on trunk)
* [svn-r17940] Purpose:Jonathan Kim2009-12-011-64/+46
| | | | | | | | | | | | | Fix potential problem similar to Bug1672 (getting garbage values) Description: This will resolve the potential problem like Bug1672 when comparing attributes. It improves the performance by not calling diff_array twice. (diffing time in half). Little clean up on comment lines. Refer to the Bug fix 1672. (svn revision 17921 on 1.8 branch) Tested on: linux32 (jam) , linux64 (almani), solaris (linew)
* [svn-r17935] Updated AIX compilers information.Albert Cheng2009-11-271-3/+3
|
* [svn-r17933] Updated with new ibm compiler configure changes.Albert Cheng2009-11-261-1/+4
|
* [svn-r17930] Enhancement:Albert Cheng2009-11-261-1/+1
| | | | | | | | | | | Added the xlc-* and mpcc_r-* BASENAME patterns to be recognized as IBM compilers so that the ibm compiler options can be added properly. This allows non-system-default compiler command names (e.g. xlc-m.n.k.l) be recognized. (need to figure out a better way to recognize it is an IBM compiler and its version information.) Tested: LLNL AIX machine.
* [svn-r17926] Add definition for HDlstat for windows. Allen Byrne2009-11-251-0/+1
| | | | Tested: windows
* [svn-r17925] Description:Quincey Koziol2009-11-239-70/+64
| | | | | | | | | | | | | | | | | Bring r17924 from trunk to 1.8 branch: Add detection for POSIX lstat() routine to configure script (mostly for non-UNIX/Linux machines) and add macro wrapper for it. Alphabetatize the system/library calls we test for, to make them easier to read. Removed the sigaction() detection & macro wrappers, since it's not used by the distribution currently. Tested on: FreeBSD/32 6.3 (duty) in debug mode (h5committested on trunk)
* [svn-r17923] Description:Quincey Koziol2009-11-231-10/+29
| | | | | | | | | | Bring r17922 from trunk to 1.8 branch: Improve error reporting for read/write failures. Tested on: FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode (h5committested on trunk)
* [svn-r17921] Purpose:Jonathan Kim2009-11-2012-35/+36
| | | | | | | | | | | | | | | | Fix Bug1672 - Display garbage value on LE machine for BE data. Description: Casuing by calling diff_dataset twice when -r or no option was given. Change to call it once which fix the problem. It also improves the performance. (diffing time in half) According further test, it also occurred on BE machine as well and it seems occruing only with the BE data attached to Bugzilla. Don't know how the file was created. Anyway this fix will prevent from diffing with garbage values in similiar potential case. Tested on: linux32 (jam) , linux64 (almani), solaris (linew)
* [svn-r17894] Description:Quincey Koziol2009-11-1521-1410/+599
| | | | | | | | | | | | | | Bring r17893 from trunk to 1.8 branch: Remove old shim H5B2 routines from refactoring, rename new routines to old routine names and switch all users of the H5B2 interface back to the old routine names now that the switch to using the more current open -> <operation> -> pattern is used for all the H5B2 code. This is the final change before adding a context to the H5B2 client encode/decode callbacks. Tested on: FreeBSD/32 6.3 (duty) in debug mode (h5committested on trunk)
* [svn-r17892] Decription:Quincey Koziol2009-11-145-157/+225
| | | | | | | | | | | Bring r17891 from trunk to 1.8 branch: Switch the shared object header messages code to use the refactored v2 B-tree routines. (this should be the interface that is using them) Tested on: FreeBSD/32 6.3 (duty) in debug mode (h5committested on trunk)
* [svn-r17890] Description:Quincey Koziol2009-11-147-69/+164
| | | | | | | | | | | | Bring r17889 from trunk to 1.8 branch: Switch a bunch of misc. places in interfaces that were already converted to use the refactored v2 B-tree routines to use the refactored v2 B-tree routines. Tested on: FreeBSD/32 6.3 (duty) in debug mode (h5committested on trunk)
* [svn-r17888] Description:Quincey Koziol2009-11-142-38/+127
| | | | | | | | | | | Bring r17887 from trunk to 1.8 branch: Convert dense attribute storage to use refactored v2 B-tree routines. Also fix some minor typos in the dense group handling code. Tested on: FreeBSD/32 6.3 (duty) in debug mode (h5commitested on trunk)
generated by cgit v0.12 at 2024-10-30 19:26:06 (GMT)