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* [svn-r23011] Purpose:Jonathan Kim2012-11-058-345/+117
| | | | | | | | | | | | HDFFV-8146 - Remove "multi-chunk IO without optimization" sub-feature from MPI I/O optimization for chunked dataset feature Description: The “multi-chunk IO without optimization” feature is removed and made the related xfer property (H5FD_MPIO_CHUNK_MULTI_IO) go directly to “multi-chunk-io” feature. Also update/fix/cleanup testings (chunk collective IO and actual chunk opt mode) accordingly. Merged from HDF5 trunk r22992. Tested: jam-pp (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE), fred (mac64-LE), linew (solaris-BE), koala-pp, wallby-pp, cmake (jam-pp), Windows (32-LE cmake)
* [svn-r23009] Snapshot version 1.8 release 11 (snap1)HDF Tester2012-11-056-20/+20
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* [svn-r23000] Description:Quincey Koziol2012-11-018-47/+55
| | | | | | | | | | | | | | | | | | | | | | | | | Bring r22998 from trunk to 1.8 branch: Clean up warnings and bring changes from Coverity branch back to trunk: r20451: Fixed coverity 810 r20454: Purpose: Fix coverity issue 816 Description: Modified various file drivers to always check the return value from H5P_get_driver_info. r20455: Purpose: Cleanup fix for coverity issue 816 Description: Removed redundant check for "fa" in H5FD_core_open. Tested on: Mac OSX/64 10.8.2 (amazon) w/debug (Too minor to require h5committest)
* [svn-r22986] Snapshot version 1.8 release 11 (snap0)HDF Tester2012-10-296-20/+20
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* [svn-r22985] Removed references to files for windows legacy builds with ↵Larry Knox2012-10-281-8/+0
| | | | | | Visual Studio which have been removed. Tested on jam.
* [svn-r22975] Update jam and koala sections for release 1.8.10. Update mpich ↵Jonathan Kim2012-10-261-34/+31
| | | | version. Remove invalid extra info from configure tables and clean ups.
* [svn-r22958] Update according to the 1.8.10 changes for jam and koala ↵Jonathan Kim2012-10-231-34/+14
| | | | compilers and config features sections. Merged from HDF5 1.8.10 r22957.
* [svn-r22956] I merged from the trunk the conversion function ↵Raymond Lu2012-10-235-10/+182
| | | | | | H5T__conv_enum_numeric (numeric type means integer or floating number) and the C test for it. This is the work for Chicago. The change in fortran/ directory is only some property change. Tested on jam, koala, and ostrich.
* [svn-r22952] Purpose:Dana Robinson2012-10-23388-122831/+0
| | | | | Removed legacy Visual Studio solutions and projects, which will no longer be supported after HDF5 1.8.10.
* [svn-r22948] I took out the redundant item of known problem about the ↵Raymond Lu2012-10-221-5/+0
| | | | | | dt_arith test reporting several errors involving "long double" on Mac OS X 10.7 Lion when any level of optimization is enabled.
* [svn-r22944] Changed the spelling of accessability to accessibility.Mark Evans2012-10-225-10/+10
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* [svn-r22941] Updated linux VM build system usedAllen Byrne2012-10-221-0/+10
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* [svn-r22937] Purpose:Dana Robinson2012-10-223-2/+2
| | | | | | | Reorganize obsolete Windows docs. Tested: N/A (docs only), ran bin/chkmanifest
* [svn-r22934] Purpose:Jonathan Kim2012-10-192-1/+21
| | | | | | | | | | | HDFFV-8145 h5diff slowness with version >= 1.8.7 Description: Improved speed when comparing HDF5 files with lots of attributes. Much slower performance was identified with release version from 1.8.7 to 1.8.10 compared to 1.8.6. Merged from HDF5 trunk r22933. Tested: jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE), tejeda (mac32-LE), cmake (jam)
* [svn-r22931] Description:Quincey Koziol2012-10-191-6/+9
| | | | Update FreeBSD info.
* [svn-r22929] Description:Quincey Koziol2012-10-199-263/+196
| | | | | | | | | | | | | | | | | | | | | | | | | | | Bring r22921 from trunk to 1.8 branch: Review Coverity changes and bring them back to trunk. (QK & JK) r20402: Added #includes for h5tools.y or h5tools_utils.h as required to remedy implicit function declarations which caused compiler warnings and coverity issues 703-4 and 708-11. r20414: This is related to the previous checkin r20399. There were incorrect updates which caused incorrect behavior when no file was given. Also possible segfault when handling hyperslab options. Simplify the code changes. r20449: Description: Modified H5E_walk2_cb to check return value of H5I_object_verify. r20450: fixed coverity 813 Tested on: Mac OSX/64 10.8.2 (amazon) w/C++, FORTRAN, debug & threadsafe (too minor to require h5committest)
* [svn-r22926] Revert change to h5fc.in (3 line comment + 1 line ineffective ↵Larry Knox2012-10-181-4/+0
| | | | | | | | code) that was inadvertently me rged from trunk before it was reverted there. Tested change on trunk and 1.8.10 branch with h5committest, make install and make installcheck on jam koala and ostrich.
* [svn-r22924] Updated LLNL aztec information.Albert Cheng2012-10-181-2/+2
| | | | Tested: just eyeballed.
* [svn-r22916] Description:Quincey Koziol2012-10-176-166/+121
| | | | | | | | | | | | | | | | | | | | | | | | | Bring r22915 from trunk to 1.8 branch: Bring Coverity changes back to trunk: r20399: Change parse_command_line to free hand structure on error and only "leave()" at end of main. r20400: Purpose: Fix coverity issue 592 Description: Added void cast to call to H5F_sfile_assert_num() in H5F_term)interface(). There is no need to check the return value of this function in general, and there would be nothing to do even if it did fail. r20401: Added free(src_sizes) and free(src_offset). --gh Tested on: Mac OSX/64 10.8.2 (amazon) w/C++, FORTRAN, threadsafe (too minor for h5committest)
* [svn-r22910] Update compiler information for ostrich.Raymond Lu2012-10-161-3/+3
| | | | No test is needed.
* [svn-r22906] Update GNU Fortran compiler version for fred.Raymond Lu2012-10-161-1/+1
| | | | No test is needed.
* [svn-r22905] Fixed typo in name of cmake config file. Needed for installing ↵Allen Byrne2012-10-161-1/+1
| | | | multiple versions on windows.
* [svn-r22892] Increment release branch for future release (v1.8.11).Albert Cheng2012-10-1214-148/+51
| | | | | | Set version number to 1.8.11-snap0. Clear out RELEASE.txt to hold 1.8.11 changes Update version references in RELEASE.txt
* [svn-r22891] Added v1.8.10 RELEASE.txt place holder.Albert Cheng2012-10-121-0/+8
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* [svn-r22889] Copy finished RELEASE.txt from the 1.8.9 branchAlbert Cheng2012-10-121-2/+720
| | | | to 1.8's HISTORY-1_8.txt file.
* [svn-r22886] Added bug fixes and enhancements since the last release.Scot Breitenfeld2012-10-121-1/+24
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* [svn-r22883] Added Mountain Lion (owl) test information.Albert Cheng2012-10-111-0/+8
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* [svn-r22880] Bug Fix: HDFFV 8017Albert Cheng2012-10-101-0/+16
| | | | | | | | | | | | | | | dt_arith would fail in Lion and Mountain Lion system when GCC version 4.2.1 is used with --enable-production. Somehow the -O optimization will fail some of the hard conversion code. Solution: This is just a temporary patch by detecting if this is a Lion or Mountain Lion system using GCC 4.2.1, then just remove the any -O option from the PROD_CFLAGS. A better fix should be deviced later. Tested: Duck(lion) and Owl (mountain lion) tested with --enable-production. Also tested in Fred and Tejeda, both Snow Leopard systems to verify there is no undesired side effect.
* [svn-r22875] Description:Quincey Koziol2012-10-091-1/+3
| | | | Add note about return value change for H5TBget_fill.
* [svn-r22873] Update test testh5copy.bat file with changes made to linux test ↵Allen Byrne2012-10-082-10/+16
| | | | | | | | script. Update testh5dump.bat file with corrections to which TOOLTEST version used and adjust for windows specific conditions Tested: windows
* [svn-r22869] Add PROVISIONAL tag to function name to match non-parallel version.Allen Byrne2012-10-081-1/+2
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* [svn-r22867] Updated cygwin note on dt_arith about the known issue of fork ↵Allen Byrne2012-10-052-2/+3
| | | | | | on cygwin. Added note about using optimization level 1 on Ubuntu64
* [svn-r22864] Move h5import change to new feature section.Allen Byrne2012-10-041-3/+11
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* [svn-r22862] Updated CYGWIN, MinGW and linux VM versionsAllen Byrne2012-10-043-27/+24
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* [svn-r22858] Change def list of RGET_REGION to match other types declarationsAllen Byrne2012-10-031-2/+1
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* [svn-r22851] updated with perform/benchpar program removal.Albert Cheng2012-10-021-2/+5
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* [svn-r22850] Bug fix: HDFFV-8156Albert Cheng2012-10-022-21/+13
| | | | | | | | | benchpar.c is compiled when configure --enable-build-all --enable-paralllel. But it failed to compile. It is decided to retire or move it to example. I removed it from the PARA_BUILD_ALL list so that --enable-build-all will not fail. The program file still need to be moved. Tested: Koala using --enable-build-all --enable-parallel.
* [svn-r22847] Snapshot version 1.8 release 10 (snap13)HDF Tester2012-10-017-23/+23
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* [svn-r22844] Merged changes from the trunk into the branch.Scot Breitenfeld2012-09-282-2/+18
| | | | Tested: jam (gnu, mpich)
* [svn-r22840] Merged changes from the trunk into the branch,Scot Breitenfeld2012-09-2822-311/+796
| | | | | | | svn merge -r22479:22826 https://svn.hdfgroup.uiuc.edu/hdf5/trunk/fortran tested: jam (gnu, intel, pgi) koala (gnu, pgi)
* [svn-r22835] Documented HDFFV-8069 fix.Albert Cheng2012-09-271-1/+3
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* [svn-r22831] Bug fix: HDFFV-8069 AIX config file Fortran flags need fix Albert Cheng2012-09-271-4/+4
| | | | | | | | | | | | | Description: The Fortran compiler flags were all set to "-O". They should be different setting for different situations. E.g, "-g" for debug and "-pg" for profile, etc. Fix: set them to appropriate different values. Tested: in Remote ADA AIX machines using 3 different settings: configure --enable-fortran --enable-cxx # default to --disable-production configure --enable-fortran --enable-cxx --enable-production configure --enable-fortran --enable-cxx --disable-production
* [svn-r22821] Issue 8164 - test_image.c printed an extra "FAILED" after it ↵Raymond Lu2012-09-271-1/+1
| | | | | | | | succeeded. A test function doesn't return 0 after it succeeds. It goes down to the error handling branch and prints "FAILED". The fix is adding "return 0;" in the end of the function. Tested on jam - simple change.
* [svn-r22814] Purpose:Jonathan Kim2012-09-267-22/+150
| | | | | | | | | | | | | | HDFFV-8012 - h5repack changes max dims and cause failure if only "-f none" is used without changing layout for chunked dataset when a chunk dim is bigger than a dataset dim Description: "h5repack -f <obj>:NONE <file.h5> out.h5" command failed if source file contains chunked dataset and a chunk dim is bigger than a dataset dim. Another issue is that the command changed max dims if chunk dim is smaller than the dataset dim. These issue occurred when dataset size is smaller than 64k (compact size limit) Fixed them. Merged from HDF5 trunk r22805 Tested: jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Windows (32-LE cmake), cmake (jam)
* [svn-r22804] Updated RELEASE.txt to include HDFFV-8058 work.Dana Robinson2012-09-241-1/+3
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* [svn-r22803] Snapshot version 1.8 release 10 (snap12)HDF Tester2012-09-247-23/+23
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* [svn-r22801] Updated for the removal of mpi-perf.c.Albert Cheng2012-09-221-15/+0
| | | | | | | Copied from the trunk version. Tested: Don't know how to test. assume if it works for trunk, it will work for v18.
* [svn-r22800] Documented the retiremen of mpi-perf.Albert Cheng2012-09-221-0/+5
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* [svn-r22796] HDFFV-8110: Removed mpi-perf.c which was given with permission ↵Albert Cheng2012-09-214-388/+5
| | | | | | | | | | | | | | | | | | | | | to freely distribute by the author. It was an example program showing how to measure parallel IO speed. Since then, we have created h5perf to do I/O performanace measurement. This example is not needed any more. mpi-perf.c: Removed. Makefile.am: Makefile.in: Removed the entry of mpi-perf.c so that "configure --enable-build-all ..." will not build it. MANIFEST: Updated. The change is trivial that I got permission to skip the code review step. Tested: h5committest plus "--enable-parallel --enable-build-all" in koala.
* [svn-r22788] HDFFV-8153: Pull POSIX_C_SOURCE define out to separate ↵Allen Byrne2012-09-1910-1/+49
| | | | | | variable. Use ADD_DEFINITIONS (${HDF5_EXTRA_C_FLAGS}) in non-fortran CMakeLists.txt folders Tested: local
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