| Commit message (Collapse) | Author | Age | Files | Lines |
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incorrect code to install scripts to run examples. Correct code to install the scripts will be checked in later.
Tested on amani and talwit using daily test shell.
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Using header file H5private.h for HDstrcpy in H5CommonFG.cpp.
Platforms tested:
Linux/32 2.6 (jam)
FreeBSD/32 6.3 (duty)
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Added #ifndef H5_NO_DEPRECATED_SYMBOLS to getObjTypeByIdx tests.
Platforms tested:
amani - with --disable-deprecated-symbols
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Added missing overloaded function getObjTypeByIdx to return type name
as a char*.
Platforms tested:
Linux/32 2.6 (jam)
FreeBSD/64 6.3 (liberty)
SunOS 5.10 (linew)
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Description:
Added missing overloaded function getObjnameByIdx to take char* for name.
Platforms tested:
Linux/32 2.6 (jam)
FreeBSD/64 6.3 (liberty)
SunOS 5.10 (linew)
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install-examples will still install example files and make install will also install them.
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macros in H5config.h.in.
I added them - H5_HAVE_SETJMP, H5_HAVE_SIGPROCMASK, and H5_HAVE_SIGSETJMP.
Tested on OpenVMS and everything passed.
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the xyz function
names.
Tested: Jam only since this is trivial.
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Tested: windows
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Bring r18666 from trunk to 1.8 branch:
Switch H5Rget_obj_type to H5Rget_obj_type2.
Tested on:
Linux/64 2.4 (amani) w/PGI compiler
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Bring r18664 from trunk to 1.8 branch:
Add a few H5Tequal() calls to make certain that the native datatype
constructed with H5Tget_native_type() is identical to the memory datatype
created from the struct in memory.
Tested on:
Mac OS X/32 10.6.3 (amazon) in debug mode
Mac OS X/32 10.6.3 (amazon) w/C++ & FORTRAN, w/threadsafe,
in production mode
(h5committested on trunk)
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Tweak H5detect to be even more careful about its actions, to allow
gcc 4.5 to use '-O3'. Also, minor code cleanups in H5Tfloat.c
Tested on:
FreeBSD/64 6.3 (liberty) w/gcc 4.5 & production mode
(h5committest not necessary/appropriate)
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Description:
longjmp do not necessary restore signal that is blocked during the signal
handling. This caused the Alignment test to fail quietly, resulting in wrong
alignment information which will cause failures later.
Solution:
One can use sigsetjmp/siglongjmp to restore signal handling but not all systems
such as Cray XT or VMS supports sigsetjmp. Backup solution is to use
sigprocmask to reset the signal. Again, some systems may not support it either.
Added code to try the first and then the second solution. Also added tests
to verify if the signal_handler routines are working properly. Finally, added
code to print results of the verification (in form of comments) to H5Tinit.c
for inspection in case of failure.
(Note that many platforms do not have alignment limits at all and ALIGNMNET
code never raise the SIGBUS or SIGSEGV errors. In those cases, it does not
matter whether the signal handlers work or not. Again, this can be deduced
from the results comments near the end of the H5Tinit.c. If the sum of signal
handlers called equals the total of verify, it means ALIGNMENT does not raise
any signals.)
Tested: htcommittested (linew is not accessible), jam(serial), Redstorm.
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Added check in H5Rcreate for space_id = -1 and is region reference type.
Added test of H5R package API parameters to testhdf5 test, these test only the public API parameter checks.
Tested: local linux
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Bring r18650 from trunk to 1.8 branch:
Bring back various minor tweaks & cleanups from the revise_chunks
branch.
Tested on:
FreeBSD/32 6.3 (duty) in debug mode
Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode
(h5committested on trunk)
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the offset, alignment, and
size of nested compound type are calculated by using H5T_cmp_offset. The old way had a bug
in it (see bug #1850).
Tested on amani, linew, and jam.
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and external
links.
Tested: Fedora (too minor for commit test)
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Fix for Bug 1793 - h5ls on a non-existent file gives 0 return code
Description:
Merged from hdf5 trunk r18642.
After the fix, h5ls returns 1 (EXIT_FAILURE) if non-existent file is given.
Tested:
jam
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Added a null character to terminate a fixed-length string returned
by H5Aread.
Platforms tested:
Linux/32 2.6 (jam)
FreeBSD/64 6.3 (liberty)
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More tweaks to PGI compile flags, to avoid too many warnings in system
header files.
Tested on:
Linux/64 2.4 (amani) w/PGI 9.x & 10.x
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Bring r18634 from trunk to 1.8 branch:
Clean up compiler warnings.
Tested on:
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
(h5committested on trunk)
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Bring r18632 from trunk to 1.8 branch:
Clean up memory leak in test code.
Tested on:
Linux/64 2.4 (amani) w/debug & valgrind
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Bring r18630 from trunk to 1.8 branch:
Fix remaining aliasing problems and enable optimizations w/gcc now. This
addresses the remaining issues for Bug#1398.
Tested on:
Mac OS X/32 10.6.3 (amazon) in debug mode
Mac OS X/32 10.6.3 (amazon) w/C++ & FORTRAN, w/threadsafe,
in production mode
(h5committested on trunk)
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Bring r18627 from trunk to 1.8 branch:
More progress toward addressing Bz#1398: add 'volatile' keyword to floating-
point types when detecting their properties. Also, minor code formatting
cleanups.
Tested on:
Mac OS X/32 10.6.3 (amazon) w/debug)
(h5committested on trunk)
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Bring r18625 from trunk to 1.8 branch:
Checkpoint progress on Bz#1398 - strict aliasing issues. (Lots of compiler
warnings & code cleanups also)
Tested on:
Mac OS X/32 10.6.3 (amazon) in debug mode
(h5committested on trunk)
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Bring r18621 from trunk to 1.8 branch:
Clean up compiler warnings.
Tested on:
Mac OS X/32 10.6.3 (amazon) w/debug
(too minor to require h5committest)
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Bring r18618 from trunk to 1.8 branch:
Add new internal object header routines to query the header chunk that
a message is in, and to lock/unlock a message into a chunk (so it doesn't get
moved into another chunk during allocation/free events).
Also, move dataspace message to beginning of object header messages
added to a dataset's object header, so it can be locked into chunk #0 (when
performing SWMR operations).
Tested on:
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
(h5committested on trunk)
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Bring r18616 from trunk to 1.8 branch:
Clean up compiler warnings.
Tested on:
Mac OS X/32 10.6.3 (amazon) w/debug
(too minor to require h5committest)
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Fix for bug 1817 : h5copy fail to copy dangling link by specifying
link path directly
Description:
Merged from hdf5 trunk r18614.
Tested:
jam, amani
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Bring r18612 from trunk to 1.8 branch:
Clean up compiler warnings & code formatting
Tested on:
Mac OS X/32 10.6.3 (amazon) w/debug
(too minor to require h5committest)
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Bring r18610 from trunk to 1.8 branch:
Clean up compiler warnings & code formatting issues.
Tested on:
Mac OS X/32 10.6.3 (amazon) w/debug)
(too minor to require h5committest)
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Bring r18608 from trunk to 1.8 branch:
Simplify object header allocation routines, and clean up some compiler
warnings.
Tested on:
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
(h5committested on trunk)
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Bring r18605 from trunk to 1.8 branch:
Add new warning flags for gcc 4.5.x
Tested on:
FreeBSD/32 6.3 (duty) w/gcc 4.5
FreeBSD/64 6.3 (liberty) w/gcc 4.5
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Bring r18600 from trunk to 1.8 branch:
Increment reference count on object header when "fake" object header
chunk proxy is returned from H5O_chunk_protect(). Also, clean up the
interface to H5O_chunk_unprotect by removing the unnecessary 'oh' parameter.
Tested on:
Mac OS X/32 10.6.3 (amazon) w/debug
(h5committested on trunk)
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Fix missing NULL initialization of pointers.
Tested on:
Mac OS X/32 10.6.3 (amazon) w/debug
(h5committested on trunk)
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Bring r18595 from trunk to 1.8 branch:
Clean up compiler warnings
Tested on:
Mac OS X/32 10.6.3 (amazon) w/debug
(too minor to require h5committest)
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Autotool Upgrade / Libtool Bug Fix
Description:
Updated autotools referenced in bin/reconfigure as follows:
Autoconf 2.64 --> Autoconf 2.65
Automake 1.11 --> Automake 1.11.1
Libtool 2.2.6a --> Libtool 2.2.6b-mcg
The referenced libtool version is a custom version of 2.2.6b. It
has been tweaked to fix a bug in libtool that occurs
when using PGI 10.0 compilers. A check incorrectly categorizes
the C++ compiler as version 1.0 instead of 10.0, and the link
line is subsequently set up incorrectly and fails to compile.
A patch has been made available and will be included in the next
release of libtool, but in the meantime I've applied the patch to a custom
installation as indicated above. This bin/reconfigure now references
the custom installation, and the resulting configure script will correctly
categorize the PGI 10.0 C++ compiler.
Ran bin/reconfigure to regenerate configure and makefiles.
Tested:
jam and amani with PGI 10.0 compilers.
h5committest
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Bring r18571 from trunk to 1.8 branch:
Bring r18542 from metadata journaling "merging" branch to trunk:
Bring new object header pin/unpin & protect/unprotect routines and
split-out object header chunk proxy changes from metadata_journaling branch to
"merging" branch, along with some other minor tweaks to clean up compiler
warnings, etc.
Also: clean up chunk protect/unprotect calls when allocating or freeing
space in a chunk, optimize metadata accumulator code to avoid some re-reading
of information from the file, refactor H5O_pin/H5O_unpin from way they are done
on the merging branch back to way they were previously done on trunk, other
minor code cleanups, etc.
Tested on:
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode
(h5committested on trunk)
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This error was
only reproducible through the use of electric fence.
Tested: Fedora (too minor for h5committest)
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Bring r18564 & r18565 from trunk to 1.8 branch: clean up compiler warnings
and whitespace issues.
Tested on:
Mac OS X/32 10.6.3 (amazon)
(too minor to require h5committest)
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Merged Fortran changes from the trunk into the branch
svn merge -r 18098:18556 https://svn.hdfgroup.uiuc.edu/hdf5/trunk/fortran
Tested: jam (intel)
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vms/c++/test/H5srcdir_str.h. No test is needed.
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