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* [svn-r26964] HDFFV-9298: make uninstall generated "test: argument expected" ↵Albert Cheng2015-04-298-0/+8
| | | | | | | | | lines The error is that $EXAMPLETOPDIR is used without setting a value first. Solution is to set them with the proper values. Tested: jam only to confirm the error no longer exists.
* [svn-r26954] Remove src temporary debug build props.Allen Byrne2015-04-284-31/+35
| | | | Move TOOLS option up before usage.
* [svn-r26945] Match src folder versionAllen Byrne2015-04-281-3/+7
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* [svn-r26940] Correct ext lib packing listAllen Byrne2015-04-281-2/+6
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* [svn-r26930] Added support for shared lib and zlib.Albert Cheng2015-04-271-5/+17
| | | | Tested: linux (jam), Mac (osx1010dev)
* [svn-r26927] Merged r26925-26926 from trunk.Albert Cheng2015-04-271-1/+36
| | | | | | | Added method to install the Mac OSX DMG file by line commands. Group all install method into a function call for easier maintenance. Tested: Linux (jam), Mac (osx1010dev)
* [svn-r26923] Remove old and invalid information:Albert Cheng2015-04-271-48/+2
| | | | | | Retired IBM SP system which was old. Removed --enable-parallel=mpich information. The option is invalid now (remove date unknown.)
* [svn-r26902] Update CMake doc referencesAllen Byrne2015-04-233-82/+139
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* [svn-r26898] Change USE to BUILDAllen Byrne2015-04-232-4/+4
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* [svn-r26872] Change location of lib settings fileAllen Byrne2015-04-211-1/+1
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* [svn-r26858] Merge r26857 from trunk.Albert Cheng2015-04-211-3/+5
| | | | | | | | | | | Bugs: The configure summary (libhdf5.settings) was missing from the configure output. Solution: Append the configure summary to the configure logfile if configure succeeds. Tested: hand ran cmakehdf5 in jam and inspected the logfile.
* [svn-r26851] Correct component matchingAllen Byrne2015-04-201-11/+9
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* [svn-r26824] merge 26771 and 26777 from trunk.Mohamad Chaarawi2015-04-1619-352/+284
| | | | | | Fix internal H5AC dxpl usage in the library. tested with h5committest.
* [svn-r26822] Update instruction that changes in this releaes that " ↵Albert Cheng2015-04-161-5/+4
| | | | | | | --enable-parallel has to be used explicitly to build parallel HDF5 regardless of the compiler type being used. (MSC - 2015/02/19 HDFFV-9068)"
* [svn-r26817] Update cmake configuration checksAllen Byrne2015-04-153-92/+0
| | | | Tested: local linux
* [svn-r26813] Removed printf debug statements.Scot Breitenfeld2015-04-151-2/+0
| | | | Tested: trival
* [svn-r26811] Updated with current information and removed outdated information.Albert Cheng2015-04-151-52/+57
| | | | | | | | | | | | | | | | o Removed 4.1.2. Compressed tar archive (*.tar.Z) since we don't release them any more. o Add "some versions of tar can auto-uncompress". o Removed reference to INSTALL_MinGW which was removed in couple releases ago. o Removed "2.2. Red Storm (Cray XT3)" since its entry in INSTALL_parallel has been removed. o Added "3.1. Make" to list Gnu like make is required. o Updated the removal of the feature of auto-configure --enable-parallel when MPI compilers are used. o Updated "4.3.3. Configuring for 64 or 32 bit support" to show how to configure both 32 or 64-bit binary.
* [svn-r26805] Updated the Fortran install text.Scot Breitenfeld2015-04-141-35/+9
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* [svn-r26789] brought changes 26767 and 26772 from the trunk into the branch.Scot Breitenfeld2015-04-131-2/+57
| | | | Tested: h5committest
* [svn-r26787] In libhdf5.settings.in, changed the C++ shared library setting ↵Dana Robinson2015-04-131-1/+1
| | | | | | | | variable from H5_CXX_SHARED (which no longer exists) to enable_static. Tested on: jam (configure only - minor change)
* [svn-r26784] Remove extra space.Larry Knox2015-04-121-1/+1
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* [svn-r26783] Remove md5 from METHODS arguments for calling bin/release ↵Larry Knox2015-04-121-2/+2
| | | | | | script from snapshot script. md5 method was remove d and md5 checksums are always produced for all compression methods.
* [svn-r26778] fix path to configAllen Byrne2015-04-101-2/+2
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* [svn-r26776] Add missing quote char.Allen Byrne2015-04-101-1/+1
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* [svn-r26769] Known problem HDFFV-8247 has been resolved in v1.8.13.Albert Cheng2015-04-081-11/+0
| | | | QAK - 2011/04/26 entry is duplicated.
* [svn-r26758] Maintenance: Updated LT_VERS_INTERFACE to 10 and ↵Elena Pourmal2015-04-078-15/+15
| | | | LT_VERS_REVISION to 1 and ran reconfigure.
* [svn-r26754] Maintenance: Changed version number in 1_8 to 1.8.16-snap0 and ↵Elena Pourmal2015-04-0712-409/+60
| | | | Updated RELEASE.txt for the new work to be entered.
* [svn-r26752] Merged r26750 and r26751 from trunk.Albert Cheng2015-04-078-25760/+14
| | | | | | | | | HDFFV-8667: h5repack crashes on enumerated 8-bit type nested in compound type. Added the testing to h5repack where it belongs. Undo the tests added to h5dump. Tested: h5committested plus tested in jam by hand.
* [svn-r26749] update RELEASE.txt with parallel issues resolved for 1.8.15Mohamad Chaarawi2015-04-071-1/+15
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* [svn-r26748] Added entry for Vailin's fix for HDFFV-9173Elena Pourmal2015-04-071-1/+9
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* [svn-r26747] updates to install_parallel.Mohamad Chaarawi2015-04-071-118/+1
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* [svn-r26745] Removed VMS installation file.Elena Pourmal2015-04-071-1/+0
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* [svn-r26744] Updated the README.txt file to reflect VMS removal; deleted VMS ↵Elena Pourmal2015-04-073-101/+151
| | | | installation instructions.
* [svn-r26743] Purpose: Fix daily test failureBinh-Minh Ribler2015-04-063-13/+18
| | | | | | | | | | | | | | | Description: - In DataType::DataType(const PredType& pred_type), using DataType::copy will invoke DataType::close() unnecessarily, which will produce undefined behavior. Changed to call H5Tcopy directly, code reuse is not useful in this case. - Also, fixed CommonFG::childObjVersion to return expected value outside of an if/else block. Merged from trunk r26737. Platforms tested: Linux/ppc64 (ostrich) Linux/64 (platypus) Linux/32 2.6 (jam)
* [svn-r26742] Purpose: Fixed HDFFV-7947 (cont.)Binh-Minh Ribler2015-04-067-23/+7
| | | | | | | | | | Description: - Added incRefCount() to other constructors that missed from last time. - Added default value for H5File::getObjCount and removed its extra version Platforms tested: Linux/64 (platypus) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r26741] Description:Binh-Minh Ribler2015-04-063-0/+55
| | | | | | | | | | | Per user Jason Newton request, the following constructor is added: H5File(hid_t existing_id); Also, fixed H5File::openFile to close current file first before re-using the object. Platforms tested: Linux/64 (platypus) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r26738] Update cmake and plugin in new features.Allen Byrne2015-04-061-2/+24
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* [svn-r26736] Maintenance: Larry and I updated the Supported Platforms and ↵Elena Pourmal2015-04-061-26/+24
| | | | | | | | Tested Configuration Summary sections. We also verified jam, platypus, loyalty and freedom info in the More Tested Platforms section. Other flavors of UNIX in the More Tested Platforms section will be checked by Allen.
* [svn-r26734] Maintenance: Removed Ubuntu record for dt_arith since it ↵Elena Pourmal2015-04-061-14/+0
| | | | | | mentioned the old system. We will need to add the new record since the dt_arith is still failing according to the CDash.
* [svn-r26733] Maintenance: Removed old entries from the Known Problems section.Elena Pourmal2015-04-061-34/+2
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* [svn-r26732] replace PGI compilers with GNU ones for building HDF5 on Hopper.Mohamad Chaarawi2015-04-061-4/+4
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* [svn-r26731] Purpose: Fixed HDFFV-7947Binh-Minh Ribler2015-04-0621-76/+225
| | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: When copy constructor or constructor that takes an existing id is invoked, the C ref counter stays the same but there is an extra C++ object which later is destroyed and may cause the HDF5 id to be closed prematurely. The C++ library needs to increment the ref counter in these situations, so that the C library will not close the id when it is still being referenced. However, the incrementing of ref count left some objects opened at the end of the program, perhaps, due to compiler's optimization on cons/destructors. The constructor, that takes an existing id, needs to increment the counter but it seems that the matching destructor wasn't invoked. The workaround is to have a function for each class that has "id" that only sets the id and not increment the ref count for the library to use in these situations. These functions are "friend" and not public. The friend functions are: void f_Attribute_setId(Attribute *, hid_t) void f_DataSet_setId(DataSet *, hid_t) void f_DataSpace_setId(DataSpace *, hid_t) void f_DataType_setId(DataType *, hid_t) Merged from trunk: r26655 Platforms tested: Linux/64 (platypus) Linux/32 2.6 (jam Intel 15.0) SunOS 5.11 (emu)
* [svn-r26730] Purpose: Adding new wrappers (HDFFR-9167 partially)Binh-Minh Ribler2015-04-057-2/+256
| | | | | | | | | | | | | | | | | | | | | | | | | Description: Added wrappers for C functions H5P[s/g]et_libver_bounds and wrappers for getting object header version // Sets bounds on versions of library format to be used when creating // or writing objects. void setLibverBounds(H5F_libver_t libver_low, H5F_libver_t libver_high) const; // Gets the current settings for the library version format bounds. void getLibverBounds(H5F_libver_t& libver_low, H5F_libver_t& libver_high) const; // Returns the object header version of an object in a file or group, // given the object's name. unsigned childObjVersion(const char* objname) const; unsigned childObjVersion(const H5std_string& objname) const; Merge from trunk r26643 Platforms tested: Linux/64 (platypus) Linux/32 2.6 (jam Intel 15.0) SunOS 5.11 (emu)
* [svn-r26729] Purpose: Fix bugsBinh-Minh Ribler2015-04-056-8/+55
| | | | | | | | | | | | | | | | | | | | Description: - Changed DataType::operator= to simply copy the id of rhs instead of calling H5Tcopy because, when the operator= is invoked, a different datatype id is created and it won't have the same characteristics as rhs', specifically, if the rhs represents a named datatype, "this" would still be a transient datatype. - Added a DataType constructor that takes a PredType object, and this constructor will cause H5Tcopy to generate another datatype id, from a predefined datatype. - Fixed various mistakes in tests. - Fixed typo that caused failure on Windows. Merged from trunk r26640 and r26462 Platforms tested: Linux/64 (platypus) Linux/32 2.6 (jam/gnu and jam/icc 15) SunOS 5.11 (emu)
* [svn-r26728] Merge trunk reviwions 26669 and 26670.Larry Knox2015-04-0444-364/+2
| | | | | | Removed from configure.ac VPATH section, LONE_COLON check and checks for redundant addition of /usr/include and /usr/lib to compile flags, with reconfigure. Tested h5committest
* [svn-r26727] Purpose: Fix warnings HDFFV-8658 cont.Binh-Minh Ribler2015-04-047-90/+102
| | | | | | | | | | | | | Description: Fixed many type conversion warnings and unused variables. Merged from trunk r26458, but also combined the fix in r26695 (dsets.cpp) to avoid test failure, that was undetected before committing to trunk until r26695. Platforms tested: Linux/64 (platypus) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r26726] Purpose: Fix warnings HDFFV-8658Binh-Minh Ribler2015-04-0411-30/+102
| | | | | | | | | | | | | | | | | | | | | | | | | Description: (r26457) The following two constructors of classes: AbstractDs, IdComponent, H5Location, and H5Object are no longer appropriate after the data member "id" had been moved from IdComponent to the sub-classes. The copy constructors are noop and will be generated by the compilers if needed so they can be removed in 1.8.15 without effecting applications. The other constructors will be removed from 1.10 release, and then from 1.8 if their removal does not raise any problems in at least two 1.10 releases. <Classname>(const hid_t h5_id); <Classname>(const <Classname>& original); Deprecation warnings are added to each of these classes. The other classes are changed to call the default constructor instead of one of the constructors above. Platforms tested: Linux/64 (platypus) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r26723] Purpose: Fixed warningsBinh-Minh Ribler2015-04-035-38/+40
| | | | | | | | | | | | | | | | | | | Description: Fixed base classes that were in wrong order on the prototype lines and some misc. warnings. Parameter had the same name as the class' member's. Replaced parameter with a different name. Missing initializing one of the base classes in multiple inheritance. Added CommonFG() to constructors' prototype. Merged from trunk r26454, r26455, and r26456. Platforms tested: Linux/64 (platypus) Linux/32 2.6 (jam) SunOS 5.11 (emu)
* [svn-r26722] Disable failing testAllen Byrne2015-04-031-1/+1
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* [svn-r26720] Add HL to default componentsAllen Byrne2015-04-031-1/+1
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