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* Purpose: Fix HDFFV-9532Binh-Minh Ribler2016-10-2373-377/+14
| | | | | | | | | | | | | Description: Removed obsolete macros from C++ API library and tests: H5_NO_NAMESPACE and __cplusplus Leave OLD_HEADER_FILENAME because iostream.h might still be in use, until further checking is done. Leave H5_NO_STD to consider retiring H5std_string first. Platforms tested: Linux/32 2.6 (jam) Linux/64 (jelly) Darwin (osx1010test)
* Merge pull request #15 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:hdf5_1_8 to ↵Vailin Choi2016-10-176-4/+453
|\ | | | | | | | | | | | | | | | | | | hdf5_1_8 * commit '36a85b7325767fe5de15d98419303807eb539c15': Merge fix for HDFFV-7991 from trunk to 1.18 Modifications to CMakeTests.cmake according to review comments. Merge fix for HDFFV-7991 from trunk to 1.18 Missed one change that should be in previous commit. Tested on mayll, platypus, osx1010test, emu, kituo, kite, quail, moohan, ostrich. Merge fix for HDFFV-7991 from trunk to 1.18 Modifications made based on comments from pull request review. Tested on mayll, platypus, osx1010test, emu, kituo, kite, quail, moohan, ostrich. Merge fix for HDFFV-7991 from trunk to 1.18 [svn-r30308] Fix for HDFFV-7991--error when copying dataset with attribute which is a compound datatype consisting of a variable length string. Tested on mayll, platypus, osx1010test, emu, kituo, kite, quail, moohan, ostrich.
| * Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_8)Vailin Choi2016-10-1731-96/+181
| |\ | |/ |/| | | | | | | | | | | * commit '394c6b8c3a4c781c1ee877f969a146cece3d7831': Add missing EXPORT tag in install command Fix typo and remove test only tools from exports Add namespace and export utils HDFFV-9961: Merge GIT ext lib option to 1.8
* | Merge pull request #81 in HDFFV/hdf5 from ↵Allen Byrne2016-10-1731-96/+181
|\ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | ~BYRN/hdf5_adb:bugfix/HDFFV-10003-1_8-examples-project-fails-to-build to hdf5_1_8 * commit '6f21a54989f9f9e08cffb062ec2f900d99c70b8d': Add missing EXPORT tag in install command Fix typo and remove test only tools from exports Add namespace and export utils HDFFV-9961: Merge GIT ext lib option to 1.8
| * | Add missing EXPORT tag in install commandAllen Byrne2016-10-1710-0/+22
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| * | Fix typo and remove test only tools from exportsAllen Byrne2016-10-142-3/+1
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| * | Add namespace and export utilsAllen Byrne2016-10-1428-85/+147
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| * | HDFFV-9961: Merge GIT ext lib option to 1.8Allen Byrne2016-10-104-11/+14
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| * Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_8)Vailin Choi2016-10-1744-3709/+3582
| |\ | |/ |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '8b4633e99d6e447327526663acd30352b5840446': (29 commits) Correct usuage of cmake variable Correct name of windows variable Add STGZ to cpack generator list for OSX Add missing exists check from master project Check file length before compare Change check for number of dimensions for old-style arrays in datatype decoding routine from an assertion to an if/HGOTO_ERROR check, since it is inappropriate to assert the contents of a file will be what we expect. Fix mistakes in porting TALOS-177 fix to 1.8. Fix bug in "nooptype" decode in fix for TALOS-0177. Fix issues in H5Znbit.c where the decompression algorithm would not check the compressed data for validity, potentially causing a buffer overflow. Replace assertion in H5O_dtype_decode_helper for number of array dimensions with a check and error. The assertion was inappropriate because it is operating on data read from the file, which the library does not always have direct control of. HDFFV-9991: Remove unneeded file Add new test file to MANIFEST Fix error reporting Update new test file references revert merge change to cleanup files Fix incorrect use of H5Rdereference2 remove merge typo Remove unsupported function Merge/align from trunk(develop) Merge/align with trunk ...
* | Merge pull request #68 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_8 to hdf5_1_8Allen Byrne2016-10-102-4/+4
|\ \ | | | | | | | | | | | | | | | * commit '4f90bb1732635e46b6dbfce0ebc697af3880ccb4': Correct usuage of cmake variable Correct name of windows variable
| * | Correct usuage of cmake variableAllen Byrne2016-10-102-4/+4
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| * | Correct name of windows variableAllen Byrne2016-10-102-4/+4
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* | Merge pull request #66 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_8 to hdf5_1_8Allen Byrne2016-10-102-65/+88
|\ \ | | | | | | | | | | | | | | | | | | * commit '67f3ffc21e2b51194dc5fa2a13be340cbb98fd65': Add STGZ to cpack generator list for OSX Add missing exists check from master project Check file length before compare
| * | Add STGZ to cpack generator list for OSXAllen Byrne2016-10-071-0/+1
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| * | Add missing exists check from master projectAllen Byrne2016-10-071-0/+8
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| * | Check file length before compareAllen Byrne2016-10-071-65/+79
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* | Merge pull request #64 in HDFFV/hdf5 from ~NFORTNE2/hdf5_nf:hdf5_1_8 to hdf5_1_8Neil Fortner2016-10-061-1/+5
|\ \ | | | | | | | | | | | | * commit '6592ab68eadc6063e560dc1a8c6ebc04b6723fcd': Change check for number of dimensions for old-style arrays in datatype decoding routine from an assertion to an if/HGOTO_ERROR check, since it is inappropriate to assert the contents of a file will be what we expect.
| * \ Merge branch 'hdf5_1_8' of ↵Neil Fortner2016-10-060-0/+0
| |\ \ | | | | | | | | | | | | ssh://bitbucket.hdfgroup.org:7999/~nfortne2/hdf5_nf into hdf5_1_8
| * | | Change check for number of dimensions for old-style arrays in datatype ↵Neil Fortner2016-10-061-1/+5
| | | | | | | | | | | | | | | | decoding routine from an assertion to an if/HGOTO_ERROR check, since it is inappropriate to assert the contents of a file will be what we expect.
* | | | Merge pull request #63 in HDFFV/hdf5 from ~BRTNFLD/hdf5_msb:hdf5_1_8 to hdf5_1_8Scot Breitenfeld2016-10-062-17/+7
|\ \ \ \ | |_|/ / |/| | | | | | | | | | | * commit 'a0c74196f0d0ba3c81c91024438b7a91d757fe4e': Fix for:
| * | | Fix for:Scot Breitenfeld2016-09-222-17/+7
| | | | | | | | | | | | | | | | | | | | HDFFV-9973 Fortran library fails to compile and fails tests with NAG compiler HDFFV-9980 Fix segfaults for F03 tests in 1.8 branch
* | | | Merge pull request #62 in HDFFV/hdf5 from ~NFORTNE2/hdf5_nf:hdf5_1_8 to hdf5_1_8Neil Fortner2016-10-061-26/+75
|\ \ \ \ | | |/ / | |/| | | | | | | | | | | | | | | | | | | | | | | | | | Fix for TALOS-0177 * commit '43ec23616697ce0ea3f99e40900fec55fe9107ef': Fix mistakes in porting TALOS-177 fix to 1.8. Fix bug in "nooptype" decode in fix for TALOS-0177. Fix issues in H5Znbit.c where the decompression algorithm would not check the compressed data for validity, potentially causing a buffer overflow.
| * | | Fix mistakes in porting TALOS-177 fix to 1.8.Neil Fortner2016-10-061-6/+5
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| * | | Fix bug in "nooptype" decode in fix for TALOS-0177.Neil Fortner2016-10-061-1/+1
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| * | | Fix issues in H5Znbit.c where the decompression algorithm would not check ↵Neil Fortner2016-10-061-23/+73
|/ / / | | | | | | | | | the compressed data for validity, potentially causing a buffer overflow.
* | | Merge pull request #60 in HDFFV/hdf5 from ~NFORTNE2/hdf5_nf:hdf5_1_8 to hdf5_1_8Neil Fortner2016-10-061-1/+2
|\ \ \ | | | | | | | | | | | | | | | | * commit '4fe02fbc51944fc9fa392c8ce7e229b8781d70ab': Replace assertion in H5O_dtype_decode_helper for number of array dimensions with a check and error. The assertion was inappropriate because it is operating on data read from the file, which the library does not always have direct control of.
| * \ \ Merge branch 'hdf5_1_8' of ↵Neil Fortner2016-10-0532-3487/+3379
| |\ \ \ | | | | | | | | | | | | | | | ssh://bitbucket.hdfgroup.org:7999/~nfortne2/hdf5_nf into hdf5_1_8
| * | | | Replace assertion in H5O_dtype_decode_helper for number of array dimensions ↵Neil Fortner2016-10-051-1/+2
| | |/ / | |/| | | | | | | | | | with a check and error. The assertion was inappropriate because it is operating on data read from the file, which the library does not always have direct control of.
* | | | Merge pull request #58 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_8 to hdf5_1_8Allen Byrne2016-10-053-102/+0
|\ \ \ \ | |_|/ / |/| | | | | | | | | | | | | | | | | | | Find file was obsolete years ago * commit '8c8a0e84b995d575557061fde5b3ebc4665717ed': HDFFV-9991: Remove unneeded file
| * | | HDFFV-9991: Remove unneeded fileAllen Byrne2016-10-043-102/+0
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* | | Merge pull request #56 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_8 to hdf5_1_8Allen Byrne2016-10-031-0/+1
|\ \ \ | | | | | | | | | | | | | | | | * commit 'afd2f09360c47b7f51a9a35c18b04cc2c820ea54': Add new test file to MANIFEST
| * | | Add new test file to MANIFESTAllen Byrne2016-10-031-0/+1
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* | | Merge pull request #50 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_8 to hdf5_1_8Allen Byrne2016-09-3032-3487/+3378
|\ \ \ | |/ / |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'f84e746de37c4b9ef11b4bf940208b1374c79e65': Fix error reporting Update new test file references revert merge change to cleanup files Fix incorrect use of H5Rdereference2 remove merge typo Remove unsupported function Merge/align from trunk(develop) Merge/align with trunk Update functions to align with trunk Fix function declaration HDFFV-9974: Correct parsing of UD filter parameters. Verified by user, who reported issue. merge from https://bitbucket.hdfgroup.org/projects/HDFFV/repos/hdf5/commits/b947f7e911e498f5455a78836a6f82a042dd5b33
| * | Fix error reportingAllen Byrne2016-09-301-7/+16
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| * | Update new test file referencesAllen Byrne2016-09-292-0/+4
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| * | revert merge change to cleanup filesAllen Byrne2016-09-291-1/+3
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| * | Fix incorrect use of H5Rdereference2Allen Byrne2016-09-291-3/+3
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| * | remove merge typoAllen Byrne2016-09-291-1/+0
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| * | Remove unsupported functionAllen Byrne2016-09-282-72/+4
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| * | Merge/align from trunk(develop)Allen Byrne2016-09-2817-767/+860
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| * | Merge/align with trunkAllen Byrne2016-09-289-2129/+2064
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| * | Update functions to align with trunkAllen Byrne2016-09-281-154/+152
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| * | Fix function declarationAllen Byrne2016-09-281-7/+7
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| * | HDFFV-9974: Correct parsing of UD filter parameters.Allen Byrne2016-09-274-438/+357
|/ / | | | | | | | | Verified by user, who reported issue. merge from https://bitbucket.hdfgroup.org/projects/HDFFV/repos/hdf5/commits/b947f7e911e498f5455a78836a6f82a042dd5b33
* | Merge pull request #30 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_8 to hdf5_1_8Allen Byrne2016-09-191-1/+2
|\ \ | | | | | | | | | | | | * commit '5a8914a6a7dbb075c56a59f5e9728c0ec1dc3e39': HDFFV-9431: allow test to be run in unique vfd folder. Pulled from trunk
| * | HDFFV-9431: allow test to be run in unique vfd folder.Allen Byrne2016-09-191-1/+2
|/ / | | | | Pulled from trunk
* | Merge pull request #28 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_8 to hdf5_1_8Allen Byrne2016-09-161-0/+7
|\ \ | | | | | | | | | | | | * commit '94afafb661669adebd905b68f26a691cae59f627': Set defualt site name
| * | Set defualt site nameAllen Byrne2016-09-161-0/+7
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* | Merge pull request #24 in HDFFV/hdf5 from ~BYRN/hdf5_adb:hdf5_1_8 to hdf5_1_8Allen Byrne2016-09-152-4/+12
|\ \ | | | | | | | | | | | | | | | * commit '0e3e1b8ee4a9c1f8d782d5ff01f0e6c1560afd2b': Change UPDATE_TYPE to git and eull name of Cdash server Add option to submit to Cdash
| * | Change UPDATE_TYPE to git and eull name of Cdash serverAllen Byrne2016-09-151-2/+2
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