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Correct merge errors from hdf5_1_8.
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Somehow Binh-Minh's latest commits to the hdf5_1_8 branch were missed
when the hdf5_1_8_21 branch was created.
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* commit 'cc4bf0fd457439ee1a7e8e4b277e850649a7e25d':
Fixed typos
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https://bitbucket.hdfgroup.org/scm/~bmribler/hdf5_1_8_bmr into hdf5_1_8
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into hdf5_1_8
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to hdf5_1_8
* commit 'e5b337dd881b60a5300675f6b30ca3429020acbe':
Code cleanup Description: The function getNumAttrs should be in H5Location so that when an attribute is the location, the function will get the number of attributes belong to the object, which the invoking attribute is attached to. Platforms tested: Linux/64 (jelly) Linux/64 (platypus) Darwin (osx1010test)
Updated for 1.8.21
Added C++ wrappers Description: - Added the following wrappers to class H5::H5Location: + H5Lcreate_soft: changed name from newLink to link // Creates a soft link from link_name to target_name. void link(const char *target_name, const char *link_name,...) void link(const H5std_string& target_name,...)
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Description:
Fixed miscellaneous typos that caused warnings when generating the
documents with doxygen.
Platforms tested:
Linux/64 (jelly)
Darwin (osx1010test)
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Description:
The function getNumAttrs should be in H5Location so that when an
attribute is the location, the function will get the number of attributes
belong to the object, which the invoking attribute is attached to.
Platforms tested:
Linux/64 (jelly)
Linux/64 (platypus)
Darwin (osx1010test)
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https://bitbucket.hdfgroup.org/scm/~bmribler/hdf5_1_8_bmr into hdf5_1_8
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Description:
- Added the following wrappers to class H5::H5Location:
+ H5Lcreate_soft: changed name from newLink to link
// Creates a soft link from link_name to target_name.
void link(const char *target_name, const char *link_name,...)
void link(const H5std_string& target_name,...)
+ H5Lcreate_hard: changed name from newLink to link
// Creates a hard link from new_name to curr_name.
void link(const char *curr_name, const Group& new_loc,...)
void link(const H5std_string& curr_name, const Group& new_loc,...)
// Creates a hard link from new_name to curr_name in same location.
void link(const char *curr_name, const hid_t same_loc,...)
void link(const H5std_string& curr_name, const hid_t same_loc,...)
+ H5Ldelete: modified existing functions to add 2nd argument
// Removes the specified link from this location.
void unlink(const char *link_name,
const LinkAccPropList& lapl = LinkAccPropList::DEFAULT)
void unlink(const H5std_string& link_name,
const LinkAccPropList& lapl = LinkAccPropList::DEFAULT)
+ H5Lcopy:
// Copy an object from a group of file to another.
void copyLink(const char *src_name, const Group& dst,...)
void copyLink(const H5std_string& src_name, const Group& dst,...)
// Copy an object from a group of file to the same location.
void copyLink(const char *src_name, const char *dst_name,...)
void copyLink(const H5std_string& src_name,...)
+ H5Lmove:
// Rename an object in a group or file to a new location.
void moveLink(const char* src_name, const Group& dst,...)
void moveLink(const H5std_string& src_name, const Group& dst,...)
// Rename an object in a group or file to the same location.
void moveLink(const char* src_name, const char* dst_name,...)
void moveLink(const H5std_string& src_name,...)
- Added using statements to H5::Group for functions that need to be
be in both classes, H5Location and CommonFG, until they can be removed.
- Removed H5A wrappers from H5Location as they've been in H5Object.
- Clean up deprecated items and updated comments.
Platforms tested:
Linux/64 (jelly)
Linux/64 (platypus)
Darwin (osx1010test)
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hdf5_1_8
* commit '2636f401ba236e99adda4cc50fb89bebbe0b73fd':
Moved a fix for HDFFV-10358 (CVE-2017-17509) from develop to 1.8.
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This was done manually due to the cache differences between
1.8 and develop.
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hdf5_1_8
* commit '878537c9cb639e84ae67c65729620cee541c253b':
Added a "won't fix" RELEASE.txt entry for HDFFV-10356.
Fix for HDFFV-10357 (CVE-2017-17508).
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https://bitbucket.hdfgroup.org/scm/~lrknox/hdf5_lrk into hdf5_1_8
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hdf5_1_8
* commit 'fb55d82aa44309df76d4c3e6a8a3d5f2c2ac7792':
Address compile errors and merge conflicts.
Remove added files.
Fix for HDFFV-10355 (CVE-2017-17506).
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https://bitbucket.hdfgroup.org/scm/~lrknox/hdf5_lrk into hdf5_1_8
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to hdf5_1_8
Improvement regarding to Exception hierarchy and throwException.
* commit '5e4bc6df758b1dffad3583391e51e3c71bb91501':
C++ API improvement Description: - Reorganized some exception classes to reflect the HDF5 object hierarchy and provide extendibility. DataSetIException -> LocationException -> Exception DataTypeIException -> LocationException -> Exception GroupIException -> LocationException -> Exception AttributeIException -> LocationException -> Exception FileIException -> GroupIException -> LocationException -> Exception - Added throwException() to these subclasses and use it in H5Location and H5Object member functions to throw an exception that is specific to the object that invokes the member function. Applications that catch the base exception can continue to do the same. - Many cleanup for inconsistencies in comments/headers. Platforms tested: Linux/64 (jelly) Linux/64 (platypus) Darwin (osx1010test)
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https://bitbucket.hdfgroup.org/scm/~bmribler/hdf5_1_8_bmr into hdf5_1_8
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to hdf5_1_8
* commit 'ffd98d490f04952e01629c6378c4528459db9f9a':
Fixed typo
C++ API improvement Description: - Added another argument, LinkCreatPropList& lcpl, to the CommonFG::createGroup() functions for the use of link creation property list. The new argument has a default value. Group createGroup(const char* name, size_t size_hint = 0, const LinkCreatPropList& lcpl = LinkCreatPropList::DEFAULT) Group createGroup(const H5std_string& name, size_t size_hint = 0, const LinkCreatPropList& lcpl = LinkCreatPropList::DEFAULT) - Removed memory leaks caused by accidentally invoking p_get_member_type (in H5CompType.cpp, user reported via email, maybe no jira issue) - Made H5Location::closeObjId static, so no object is needed to close an hdf5 id. - Added classes StrCreatPropList, LinkCreatPropList, AttrCreatPropList for the C property list classes H5P_STRING_CREATE, H5P_LINK_CREATE, and H5P_ATTRIBUTE_CREATE. Platforms tested: Linux/64 (jelly) Linux/64 (platypus) Darwin (osx1010test)
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hdf5_1_8
* commit '11a188a4b6f1da0bd81c54976e6ceb8530d71aa1':
Correct typo in h5jam/unjam usage messages.
Fix for HDFFV-10354 (CVE-2017-17505).
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Description:
- Reorganized some exception classes to reflect the HDF5 object
hierarchy and provide extendibility.
DataSetIException -> LocationException -> Exception
DataTypeIException -> LocationException -> Exception
GroupIException -> LocationException -> Exception
AttributeIException -> LocationException -> Exception
FileIException -> GroupIException -> LocationException -> Exception
- Added throwException() to these subclasses and use it in H5Location
and H5Object member functions to throw an exception that is specific
to the object that invokes the member function. Applications that
catch the base exception can continue to do the same.
- Many cleanup for inconsistencies in comments/headers.
Platforms tested:
Linux/64 (jelly)
Linux/64 (platypus)
Darwin (osx1010test)
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https://bitbucket.hdfgroup.org/scm/~bmribler/hdf5_1_8_bmr into hdf5_1_8
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Description:
- Added another argument, LinkCreatPropList& lcpl, to the CommonFG::createGroup()
functions for the use of link creation property list. The new argument has
a default value.
Group createGroup(const char* name, size_t size_hint = 0,
const LinkCreatPropList& lcpl = LinkCreatPropList::DEFAULT)
Group createGroup(const H5std_string& name, size_t size_hint = 0,
const LinkCreatPropList& lcpl = LinkCreatPropList::DEFAULT)
- Removed memory leaks caused by accidentally invoking p_get_member_type
(in H5CompType.cpp, user reported via email, maybe no jira issue)
- Made H5Location::closeObjId static, so no object is needed to close an hdf5 id.
- Added classes StrCreatPropList, LinkCreatPropList, AttrCreatPropList
for the C property list classes H5P_STRING_CREATE, H5P_LINK_CREATE,
and H5P_ATTRIBUTE_CREATE.
Platforms tested:
Linux/64 (jelly)
Linux/64 (platypus)
Darwin (osx1010test)
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(cherry picked from commit 302053f978e38a8d4306a7c1233cdf8fd2ec28dd)
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to hdf5_1_8
HDFFV-10404: typo fixes
* commit 'c1e82e516fb6c8c7fe40be385ef09dd5502205f0':
Fixed typos Description: Looked for typos similar to user's report in HDFFV-10404. Not all the same but many were found and fixed. Platforms tested: Linux/64 (jelly) - only typos
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https://bitbucket.hdfgroup.org/scm/~bmribler/hdf5_1_8_bmr into hdf5_1_8
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* commit 'd87a94a00d09f8b441d02272b06d6866eec4c883':
HDFFV-10444 fix so numbers
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Description:
Looked for typos similar to user's report in HDFFV-10404.
Not all the same but many were found and fixed.
Platforms tested:
Linux/64 (jelly) - only typos
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to hdf5_1_8
* commit '519e475851e1e864215bef950dd5037e812f44b6':
Removed external links from C++ doc.
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https://bitbucket.hdfgroup.org/scm/~bmribler/hdf5_1_8_bmr into hdf5_1_8
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* commit '87d751eb2805d774deaa45eefe06413c8d450922':
Correct name of hl compile script
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* commit 'b7514b5990559c49674032bc5d431638f3d33310':
Puul vs2017 readme fix from develop
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