| Commit message (Collapse) | Author | Age | Files | Lines |
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Description:
On test fails from the release tarball. Specifically, the h5diff xml test for tsaf.h5.xml. For some reason, fc (Windows diff utility) detects differences from the expected output if the file has unix-style end-of-line characters. It only happens for this test. I suspect it is because the file is so long, but it's too late to debug for the release. Simply comment it out until we can fix it.
Tested:
VS2005 on WinXP (32- and 64-bit)
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Summary sections for THG and NCSA machines.
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release. There is still work to do
on this file before the source release.
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1.8.1-rc1 before creating a tar
ball for remote testing
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Added processor id in failure messages for MPI.
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Removed extra MPI calls in subroutine by just passing
MPI variables into subroutines.
Added checks for MPI errors.
Cleaned-up formatting.
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memory growth; fixed
Platforms tested: kagiso (minor fix)
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Description:
Removed an unnecessary member function, H5File::dereference.
Platforms tested:
SunOS 5.10 (linew)
Linux 2.6 (kagiso)
FreeBSD (duty)
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Description:
Add a function to test old h5repack syntax, as well as a new test case for it.
Tested:
VS2005 on WinXP
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compability
Used the function TOOLTEST from 1.6.7
Tested: linux
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Description:
Remove c_str() from a String argument.
Platforms:
SunOS 5.10 (linew)
Linux 2.6 (kagiso)
FreeBSD (duty)
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links in indexed format
tested: windows
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Description:
The class hierarchy was revised to address the problem reported in
bugzilla #1068. Classes AbstractDS and Attribute are moved out of
H5Object. Class Attribute now multiply inherits from IdComponent and
AbstractDs and class DataSet from H5Object and AbstractDs.
In addition, data member IdComponent::id was moved into subclasses:
Attribute, DataSet, DataSpace, DataType, H5File, Group, and PropList.
Also fixed bugzilla 1045: revised Attribute::write and Attribute::read
wrappers to handle memory allocation/deallocation properly. (bugzilla 1045)
Platforms tested:
SunOS 5.10 (linew)
Linux 2.6 (kagiso)
FreeBSD (duty)
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Description:
perf would crash at the end as it complained it was doing MPI calls after
MPI_Finalize() is called. I suspect the HDF5 library is making MPI calls
in the at_exit area. This should not happened.
Solution:
Added the H5exit() right before MPI_Finalize() fixed the problem.
But it needs to find out why HDF5 library is making MPI calls in
the at_exit() area. It should not.
Also, changed the temporay data file name from /tmp/test.out to
perftest.out, both to avoid multiple instance of this may use the
same /tmp/xxx name and also make the file name less generic.
Tested:
Kagiso PP.
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Description:
The fortran Makefile.am used HDF_FORTRAN to indicate it is part of the
Fortran API source so that conclude.am will give fortran api prefix in the
test output. The symbox HDF_FORTRAN is also used in configure for a different
purpose (indicated --enable-fortran). They conflicted.
Similar problem for the symbol HDF_CXX.
Solution:
Changed all the involved Makefile.am to use "FORTRAN_API" instead. It is
a more appropriate name. Same for CXX_API.
Along the way, discovered that the Makefile.am of hl/fortran/test and
hl/cxx/test did not have those symbols at all. Added them in.
Platform tested:
Kagiso serial and h5committested (kagisopp, smirom, linew).
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Description: Removing make target 'make check-perform'. The extra target is
unneeded because the tests don't take as long to run as initially
anticipated, and can be lumped in with 'make check'.
Tested: kagiso
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Description:
1 new test added for command-line syntax compatibility
Tested:
VS2005 on WinXP
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Bring revision 15037 from trunk:
Better cleanup of internal structures when no szip encoder.
Tested on:
Linux/32 2.6 (kagiso) w/szip-no encoder
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Backport revision 15034 from trunk:
Correct another case of using 'size_t' for chunk sizes where 'uint32_t'
was necessary.
Tested on:
FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN
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Improvement.
Description:
src/libhdf5.settings was the initial configure summary and is installed.
Then configure is changed to dump a summary of the configure settings to
the output and also append it to src/libhdf5.settings. That created
two different output formats and duplicated information. This is the
initial attempt to clean up this confusion and unify the output format.
It is decided to use the src/libhdf5.settings template as the unified means.
This requires more macros symbols be defined. The following symbols are
all related to generating the src/libhdf5.settings file.
AC_SUBST(EXTERNAL_FILTERS)
AC_SUBST(MPE) MPE=no
AC_SUBST(STATIC_EXEC) STATIC_EXEC=no
AC_SUBST(HDF_FORTRAN) HDF_FORTRAN=no
AC_SUBST(FC) HDF_FORTRAN=no
AC_SUBST(HDF_CXX) HDF_CXX=no
AC_SUBST(CXX) HDF_CXX=no
AC_SUBST(HDF5_HL) HDF5_HL=yes
AC_SUBST(GPFS) GPFS=no
AC_SUBST(LINUX_LFS) LINUX_LFS=no
AC_SUBST(INSTRUMENT) INSTRUMENT=no
AC_SUBST(CODESTACK) CODESTACK=no
AC_SUBST(HAVE_DMALLOC) HAVE_DMALLOC=no
AC_SUBST(DIRECT_VFD) DIRECT_VFD=no
AC_SUBST(THREADSAFE) THREADSAFE=no
AC_SUBST(STATIC_SHARED)
AC_SUBST(enable_shared)
AC_SUBST(enable_static)
AC_SUBST(UNAME_INFO) UNAME_INFO=`uname -a`
The src/libhdf5.settings.in has CONDITIONAL's added to it too. The
untrue conditions turned into a "#" and these lines are cleaned by the
post processing script.
Platform tested:
h5committest on kagiso, smirom and linew. (smirom had failures not due to
my changes.)
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subroutines.
Platfomrs tested: kagiso with Intel compilers (this is bug 1046, I am not closing it since there is
no test for those routines yet)
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if these are detected this syntax is used, otherwise the one in usage is used
there was another -i option for
-i L2, --indexed=L2 Minimum number of links in the indexed format
That was changed to -d
-d L2, --indexed=L2 Minimum number of links in the indexed format
Tested: windows, linux
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recommendations.
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Purpose: Configure Fix
Description: The test program h52gifgentst was getting installed in the bin
directory during 'make install', and it shouldn't. Make now builds
the program for use in testing but doesn't install it during
'make install'.
Tested: kagiso
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Platforms tested: kagiso with g95, Intel and PGI compilers and with -i8 flag
smirom with g95 and -i8 flag, duty with gfortran42
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Port revision 15015 back to 1.8 branch:
> Detect chunks that are >4GB before dataset gets created and return error
> to application.
>
> Tweak lots of internal variables that hold the chunk size/dimensions to
> use an 'uint32_t', instead of a 'size_t', so that the integer size is constant.
>
> Correct a number of our tests which were creating datasets with chunks
> that were >4GB and add some specific tests for >4GB chunk size detection.
>
> Minor whitespace & other code cleanups.
Tested on:
Mac OS X/32 10.5.2 (amazon)
Forthcoming testing on other platforms...
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Description: The macro H5_HAVE_WINDOW_PATH is now defined to 1 only when
MinGW is in use. This is needed to fix the "links" test, and the
external link feature in the library.
Tested: kagiso
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Description: The configure option --disable-sharedlib-rpath will disable
embedding of the '-Wl,-rpath' information into executables
when shared libraries are produced.
Tested: kagiso
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Description: cleaning up configure related to removal of --disable-hsizet
flag, which we no longer support.
Tested: kagiso
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Description:
-- INSTALL_Windows.txt:
-- Update szip version number to 2.1
-- Extra details for setting up 64-bit builds
-- Explain adding HDF5 link settings more clearly
-- Add link to FAQ
-- Misc. typos and formatting
-- INSTALL_Windows_From_Command_Line.txt
-- Add note about 64-bit support
-- INSTALL_Windows_Short_NET.TXT
-- Add notes detailing features unsupported on VS.NET
-- INSTALL_Windows_Short_VS2005.TXT
-- Add notes about extra features.
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Description:
Small changes to the documentation-- update version strings to 1.8.1 and document the HDF5TestExpress variable
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Description:
Small changes, such as commenting out an additional test and fixing the search path, have been added to the MinGW install instructions.
Tested:
MinGW on WinXP
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command line
Description:
We can dynamically detect the host architecture using the PROCESSOR_ARCHITECTURE variable. This allows us to setup our build paths accordingly and build 64-bit Windows binaries from the command line. This allows us to run autotests on 64-bit Windows as well.
Tested:
VS2005 on WinXP x64
VS2005 on WinXP x86
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Platforms tested: kagiso, will do more testing later with -i8 flag.
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Description: Typo in the configure.in script. CC_VERSION should be set using
CC_NOFLAGS, but is currently using CC_NOFLAG, which does not exist.
Tested: kagiso (configure issue)
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Description:
There were a number of small tweaks we needed to make to add the new fortran_1_8 code on Windows. We create new project files, add new source to them, add the test to our test suite, and fix a few typos in the Windows-specific source code.
Tested:
VS2005 on WinXP
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Description:
One test has been added to h5dump test for custom output formats. This adds the test on Windows as well.
Tested:
VS2005 on WinXP
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the external link
points to. (PVN - 2008/05/12)
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the target object as part of TARGETPATH, noted with some extra indentation
The previous printing of
LINKCLASS 64
was removed
HDF5 "textlinksrc.h5" {
GROUP "/" {
EXTERNAL_LINK "ext_link1" {
TARGETFILE "textlinktar.h5"
TARGETPATH "dset"
DATASET "dset" {
DATATYPE H5T_STD_I32LE
DATASPACE SIMPLE { ( 6 ) / ( 6 ) }
DATA {
(0): 1, 2, 3, 4, 5, 6
}
}
}
}
}
There is no script test for this behavior so far, because test script uses complete paths that vary from test to test, making not possible to define a valid TARGETFILE in the file
tested: windows, linux, solaris
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less than size of name
Description:
In the new tests merged from the fortran_1_8 branch, there is a test that fetches a dataset name in a small buffer. The call to H5G_get_name_by_addr wrote an extra byte off the end of the buffer. A simple and sufficient fix is to decrease the buffer size passed to strncmp by 1. This bug was only caught by Visual Studio 2005 with extra debug checks on.
Tested:
VS2005 on WinXP
kagiso
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Description: Tests in perform directory were never getting run, and
h5perf* programs were not being installed.
Solution: Added another build option, 'make check-perform', which runs the
tests in the perform directory. Also modified the Makefiles in the
perform directory to install (with 'make install') h5perf when
parallel is enabled, and h5perf and h5perf_serial when parallel is
disabled
Tested: kagiso, smirom, linew
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(svn merge -r 14942:14963 http://svn.hdfgroup.uiuc.edu/hdf5/trunk/fortran)
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APIs. Fixed.
Platforms tested: kagiso and UCAR IRIX machine
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2. src/H5private.h: remove #define for HDputenv()
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svn merge -r 14824:14945 http://svn.hdfgroup.uiuc.edu/hdf5/trunk/perform
command to bring changes in.
Platforms tested: kagiso with Intel compilers, smirom with GNU compiler
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